FFCP PHASE1:Hg19::chr3:45067659..45067668,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7123 | |EntrezGene=7123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11891 | |HGNC=11891 | ||
|TSSclassifier=strong | |||
|UniProt=P05452 | |UniProt=P05452 | ||
|association_with_transcript=-6bp_to_ENST00000296130_5end | |association_with_transcript=-6bp_to_ENST00000296130_5end | ||
|cluster_id=chr3:45067659..45067668,+ | |||
|coexpression_cluster_id=C1016 | |||
|description=CAGE_peak_5_at_CLEC3B_5end | |description=CAGE_peak_5_at_CLEC3B_5end | ||
|id=chr3:45067659..45067668,+ | |id=chr3:45067659..45067668,+ | ||
|ontology_enrichment_celltype=CL:0000136!7.31e-08!15 | |ontology_enrichment_celltype=CL:0000136!7.31e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000135;9.42e-10;3!CL:0000388;9.42e-10;3!CL:0000136;2.22e-07;13!CL:0002561;3.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,8.94e-10,3;CL:0000388,8.94e-10,3;CL:0002561,3.71e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.64e-17!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.64e-12;8!UBERON:0000982;2.64e-12;8!UBERON:0004770;2.64e-12;8!UBERON:0007846;9.42e-10;3!UBERON:0000043;9.42e-10;3!UBERON:0007845;9.42e-10;3!UBERON:0011135;5.60e-09;5!UBERON:0002216;5.60e-09;5!UBERON:0011134;5.60e-09;5!UBERON:0002209;5.60e-09;5!UBERON:0002213;5.60e-09;5!UBERON:0007844;5.60e-09;5!UBERON:0011138;5.60e-09;5!UBERON:0001130;5.60e-09;5!UBERON:0001066;5.60e-09;5!UBERON:0001468;5.60e-09;5!UBERON:0005933;3.80e-07;2!UBERON:0005942;3.80e-07;2!UBERON:0005932;3.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.92e-12,8;UBERON:0000982,1.92e-12,8;UBERON:0004770,1.92e-12,8;UBERON:0007846,8.94e-10,3;UBERON:0000043,8.94e-10,3;UBERON:0007845,8.94e-10,3;UBERON:0011135,4.17e-09,5;UBERON:0002216,4.17e-09,5;UBERON:0011134,4.17e-09,5;UBERON:0002209,4.17e-09,5;UBERON:0002213,4.17e-09,5;UBERON:0005856,4.17e-09,5;UBERON:0005866,4.17e-09,5;UBERON:0005863,4.17e-09,5;UBERON:0007844,4.17e-09,5;UBERON:0011138,4.17e-09,5;UBERON:0001130,4.17e-09,5;UBERON:0001066,4.17e-09,5;UBERON:0001468,4.17e-09,5;UBERON:0005933,3.71e-07,2;UBERON:0005942,3.71e-07,2;UBERON:0005932,3.71e-07,2 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,2.00146596706261,0,0,0,0.631719873426831,3.3954131665979,0,0,0,0,1.8564952944007,4.63956326019082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,2.53007406669196,1.50401373190767,0.869079113764942,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0.311211035399766,0,0,1.21085942115945,0.576175924479999,0,0.312160076830321,0,0.597794722207204,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,2.77624605464138,2.11931901159562,0.600182192168805,1.13357782162283,0,0.37223371266318,0.168776332241266,0,0.252433774244115,3.86609574297657,1.13152239773168,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,3.71494342425583,18.0469870417396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.50496973370552,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.1466765716419,0,60.80159579482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30303176000821,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,2.08575535922538,1.50051156317903,0.542530047399471,0.207970861530807,2.49800584316026,0.315404830067869,3.27995961979597,15.0473049863859,0,0,0.664225598535437,0,0.781952530212746,2.93701736194111,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0,0.512556597022804,0,0,0,0,0,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0.770243085573222,0.15350367472613,0,1.6113036730241,0.870100163485371,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,2.21465597303108,0.571890581771475,1.27948895655667,2.56763392820352,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,1.9676842561399,0,0.30982349809975,0,0,0,0,0,4.64436797654861,14.4889752902357,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,15.5183915079499,0.296964680832639,19.9654456364501,0,0,0,0,0,1.79323189425963,0,0,0,0,0.622079175323615,0,0,0,0.986434056369336,0,8.89095921157095,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0,0,1.00035336054936,0,0,0,0,4.46601623624687,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0.789168805698781,1.20990716048664,0.30607276163049,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,0.189932387867636,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0.458320848023367,1.43574604915363,0.798716001995964,0.429226048136571,0.89268582976749,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,1.26089131678717,0.157363764404994,0,0,0,4.2881719582402,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.533937062838473,1.25763444079733,0.828478110694391,0.496166021811951,0,0,0,6.52821364043369,5.013797880454,2.75711019087115,1.96723578425883,0,0,0,0,1.14681839138014,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0.189403005275089,2.0125432140206,17.7962244319307,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0.358177682162975,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0.79832133146375,0,0,0,0,0,0,0.470958557103084,0,0,2.73947616152849,0,0,1.00067161847319,0,0,0,0,0,0,0,1.29068207646083,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,3.4794432940146,1.45713297917742,0,0,0,0,0,0,0.154348316215889,1.09279780251979,0,0.735444965261716,0,0.196308467114945,0,1.6906229103336,0,5.54505116081136,6.70362034925203,0,0,0,0,0.730336388246517,0,0,0,0,0.436350690340377,0.5290268405154,2.60396512716726,12.0165663444169,14.276676550085,0,0,0,0,0,0,0,0.303114792872958,1.87574891109325,0,0,1.27940389140589,2.14257988317366,0,0.186224142887574,0,0.190941474834495,1.0105859447911,0.435433495793923,1.02669990325584,0.134704106029175,0.143444410785353,0.99798106963804,0,0,0,0,0,0.611207220914332,0.406896178315738,0.665756774185513,1.40891655513718,0 | |phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,2.00146596706261,0,0,0,0.631719873426831,3.3954131665979,0,0,0,0,1.8564952944007,4.63956326019082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,2.53007406669196,1.50401373190767,0.869079113764942,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0.311211035399766,0,0,1.21085942115945,0.576175924479999,0,0.312160076830321,0,0.597794722207204,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,2.77624605464138,2.11931901159562,0.600182192168805,1.13357782162283,0,0.37223371266318,0.168776332241266,0,0.252433774244115,3.86609574297657,1.13152239773168,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,3.71494342425583,18.0469870417396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.50496973370552,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.1466765716419,0,60.80159579482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30303176000821,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,2.08575535922538,1.50051156317903,0.542530047399471,0.207970861530807,2.49800584316026,0.315404830067869,3.27995961979597,15.0473049863859,0,0,0.664225598535437,0,0.781952530212746,2.93701736194111,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0,0.512556597022804,0,0,0,0,0,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0.770243085573222,0.15350367472613,0,1.6113036730241,0.870100163485371,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,2.21465597303108,0.571890581771475,1.27948895655667,2.56763392820352,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,1.9676842561399,0,0.30982349809975,0,0,0,0,0,4.64436797654861,14.4889752902357,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,15.5183915079499,0.296964680832639,19.9654456364501,0,0,0,0,0,1.79323189425963,0,0,0,0,0.622079175323615,0,0,0,0.986434056369336,0,8.89095921157095,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0,0,1.00035336054936,0,0,0,0,4.46601623624687,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0.789168805698781,1.20990716048664,0.30607276163049,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,0.189932387867636,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0.458320848023367,1.43574604915363,0.798716001995964,0.429226048136571,0.89268582976749,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,1.26089131678717,0.157363764404994,0,0,0,4.2881719582402,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.533937062838473,1.25763444079733,0.828478110694391,0.496166021811951,0,0,0,6.52821364043369,5.013797880454,2.75711019087115,1.96723578425883,0,0,0,0,1.14681839138014,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0.189403005275089,2.0125432140206,17.7962244319307,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0.358177682162975,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0.79832133146375,0,0,0,0,0,0,0.470958557103084,0,0,2.73947616152849,0,0,1.00067161847319,0,0,0,0,0,0,0,1.29068207646083,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,3.4794432940146,1.45713297917742,0,0,0,0,0,0,0.154348316215889,1.09279780251979,0,0.735444965261716,0,0.196308467114945,0,1.6906229103336,0,5.54505116081136,6.70362034925203,0,0,0,0,0.730336388246517,0,0,0,0,0.436350690340377,0.5290268405154,2.60396512716726,12.0165663444169,14.276676550085,0,0,0,0,0,0,0,0.303114792872958,1.87574891109325,0,0,1.27940389140589,2.14257988317366,0,0.186224142887574,0,0.190941474834495,1.0105859447911,0.435433495793923,1.02669990325584,0.134704106029175,0.143444410785353,0.99798106963804,0,0,0,0,0,0.611207220914332,0.406896178315738,0.665756774185513,1.40891655513718,0 | ||
|short_description=p5@CLEC3B | |short_description=p5@CLEC3B | ||
}} | }} |
Latest revision as of 08:29, 18 September 2015
Short description: | p5@CLEC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CLEC3B_5end |
Coexpression cluster: | C1016_Mesenchymal_Synoviocyte_tenocyte_lung_mesenchymal_diaphragm_breast |
Association with transcript: | -6bp_to_ENST00000296130_5end |
EntrezGene: | CLEC3B |
HGNC: | 11891 |
UniProt: | P05452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 8.94e-10 | 3 |
tendon cell | 8.94e-10 | 3 |
outer root sheath cell | 3.71e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
articulation | 1.92e-12 | 8 |
skeletal joint | 1.92e-12 | 8 |
articular system | 1.92e-12 | 8 |
dense regular connective tissue | 8.94e-10 | 3 |
tendon | 8.94e-10 | 3 |
regular connective tissue | 8.94e-10 | 3 |
intervertebral cartilage | 4.17e-09 | 5 |
symphysis | 4.17e-09 | 5 |
nonsynovial joint | 4.17e-09 | 5 |
fibrous joint | 4.17e-09 | 5 |
cartilaginous joint | 4.17e-09 | 5 |
developing mesenchymal condensation | 4.17e-09 | 5 |
pre-cartilage condensation | 4.17e-09 | 5 |
cartilaginous condensation | 4.17e-09 | 5 |
cartilage element | 4.17e-09 | 5 |
post-cranial axial skeletal system | 4.17e-09 | 5 |
vertebral column | 4.17e-09 | 5 |
intervertebral disk | 4.17e-09 | 5 |
intervertebral joint | 4.17e-09 | 5 |
hair root sheath | 3.71e-07 | 2 |
hair outer root sheath | 3.71e-07 | 2 |
bulb of hair follicle | 3.71e-07 | 2 |