FFCP PHASE1:Hg19::chr2:72375244..72375254,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56603 | |EntrezGene=56603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20581 | |HGNC=20581 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR63 | |UniProt=Q9NR63 | ||
|association_with_transcript=-77bp_to_ENST00000001146_5end | |association_with_transcript=-77bp_to_ENST00000001146_5end | ||
|cluster_id=chr2:72375244..72375254,- | |||
|coexpression_cluster_id=C2704 | |coexpression_cluster_id=C2704 | ||
|description=CAGE_peak_12_at_CYP26B1_5end | |description=CAGE_peak_12_at_CYP26B1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002537!4.78e-08!5 | |ontology_enrichment_celltype=CL:0002537!4.78e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000746;2.40e-38;3!CL:0000737;4.52e-29;4!CL:0002537;1.36e-23;5!CL:0000346;1.09e-10;3!CL:1000428;1.09e-10;3!CL:0002494;4.83e-08;16!CL:0000349;6.10e-07;19!CL:0002559;6.39e-07;5 | |ontology_enrichment_celltype_v019=CL:0000746;2.40e-38;3!CL:0000737;4.52e-29;4!CL:0002537;1.36e-23;5!CL:0000346;1.09e-10;3!CL:1000428;1.09e-10;3!CL:0002494;4.83e-08;16!CL:0000349;6.10e-07;19!CL:0002559;6.39e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,2.64e-38,3;CL:0000513,2.64e-38,3;CL:0000737,4.86e-29,4;CL:0002537,1.14e-23,5;CL:0000346,1.09e-10,3;CL:1000428,1.09e-10,3;CL:0002494,4.91e-08,16;CL:0000349,5.84e-07,19;CL:0002559,6.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000513;2.40e-38;3 | |ontology_enrichment_development_v019=CL:0000513;2.40e-38;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.12e-12;10 | |ontology_enrichment_disease_v019=DOID:171;2.12e-12;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.24e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.11e-07!14;UBERON:0000158!5.11e-07!14 | |ontology_enrichment_uberon=UBERON:0005631!5.11e-07!14;UBERON:0000158!5.11e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.37e-29;4!UBERON:0000923;2.37e-29;4!UBERON:0010316;2.37e-29;4!UBERON:0005291;2.37e-29;4!UBERON:0002050;1.02e-23;5!UBERON:0005423;1.02e-23;5!UBERON:0000305;3.56e-17;7!UBERON:0005631;2.44e-12;10!UBERON:0000158;2.44e-12;10!UBERON:0000412;1.09e-10;3!UBERON:0001992;1.09e-10;3!UBERON:0002073;6.39e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002346;2.37e-29;4!UBERON:0000923;2.37e-29;4!UBERON:0010316;2.37e-29;4!UBERON:0005291;2.37e-29;4!UBERON:0002050;1.02e-23;5!UBERON:0005423;1.02e-23;5!UBERON:0000305;3.56e-17;7!UBERON:0005631;2.44e-12;10!UBERON:0000158;2.44e-12;10!UBERON:0000412;1.09e-10;3!UBERON:0001992;1.09e-10;3!UBERON:0002073;6.39e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,3.15e-17,7;UBERON:0004871,3.29e-15,8;UBERON:0000412,1.09e-10,3;UBERON:0001992,1.09e-10,3;UBERON:0005631,4.04e-09,14;UBERON:0000158,4.04e-09,14;UBERON:0002073,6.39e-07,5;UBERON:0005086,6.39e-07,5 | |||
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| ||
|short_description=p12@CYP26B1 | |short_description=p12@CYP26B1 | ||
}} | }} |
Latest revision as of 08:25, 18 September 2015
Short description: | p12@CYP26B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CYP26B1_5end |
Coexpression cluster: | C2704_amniotic_neuroectodermal_Cardiac_leiomyoblastoma_skin_neuroepithelioma_breast |
Association with transcript: | -77bp_to_ENST00000001146_5end |
EntrezGene: | CYP26B1 |
HGNC: | 20581 |
UniProt: | Q9NR63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 2.64e-38 | 3 |
cardiac muscle myoblast | 2.64e-38 | 3 |
striated muscle cell | 4.86e-29 | 4 |
amnion mesenchymal stem cell | 1.14e-23 | 5 |
hair follicle dermal papilla cell | 1.09e-10 | 3 |
stem cell of epidermis | 1.09e-10 | 3 |
cardiocyte | 4.91e-08 | 16 |
extraembryonic cell | 5.84e-07 | 19 |
hair follicle cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
amnion | 3.15e-17 | 7 |
somatic layer of lateral plate mesoderm | 3.29e-15 | 8 |
dermal papilla | 1.09e-10 | 3 |
papillary layer of dermis | 1.09e-10 | 3 |
extraembryonic membrane | 4.04e-09 | 14 |
membranous layer | 4.04e-09 | 14 |
hair follicle | 6.39e-07 | 5 |
hair follicle placode | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.24e-12 | 10 |