FFCP PHASE1:Hg19::chr2:72374948..72374967,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56603 | |EntrezGene=56603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20581 | |HGNC=20581 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z2K6,Q9NR63 | |UniProt=B7Z2K6,Q9NR63 | ||
|association_with_transcript=0bp_to_ENST00000546307,NM_019885,uc002sih.1,uc010yrb.1_5end | |association_with_transcript=0bp_to_ENST00000546307,NM_019885,uc002sih.1,uc010yrb.1_5end | ||
|cluster_id=chr2:72374948..72374967,- | |||
|description=CAGE_peak_4_at_CYP26B1_5end | |description=CAGE_peak_4_at_CYP26B1_5end | ||
|id=chr2:72374948..72374967,- | |id=chr2:72374948..72374967,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.48e-14;5!CL:0000349;9.09e-14;19!CL:0002577;1.08e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.49e-14,5;CL:0000349,9.11e-14,19;CL:0002577,1.03e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.65e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.50e-29!115;UBERON:0001049!1.01e-14!57;UBERON:0005068!1.01e-14!57;UBERON:0006241!1.01e-14!57;UBERON:0007135!1.01e-14!57;UBERON:0002616!8.90e-13!59;UBERON:0002346!1.49e-12!90;UBERON:0000064!1.69e-12!219;UBERON:0000955!2.91e-12!69;UBERON:0006238!2.91e-12!69;UBERON:0001017!1.39e-11!82;UBERON:0000924!2.63e-11!173;UBERON:0006601!2.63e-11!173;UBERON:0005743!2.64e-11!86;UBERON:0002020!8.20e-11!34;UBERON:0003528!8.20e-11!34;UBERON:0001893!1.08e-10!34;UBERON:0003075!1.23e-10!86;UBERON:0007284!1.23e-10!86;UBERON:0000073!3.87e-10!94;UBERON:0001016!3.87e-10!94;UBERON:0000153!6.08e-10!129;UBERON:0007811!6.08e-10!129;UBERON:0004121!8.36e-10!169;UBERON:0002791!8.70e-10!33;UBERON:0005631!1.70e-09!14;UBERON:0000158!1.70e-09!14;UBERON:0001869!1.92e-09!32;UBERON:0002619!2.95e-09!22;UBERON:0002780!5.71e-09!41;UBERON:0001890!5.71e-09!41;UBERON:0006240!5.71e-09!41;UBERON:0001950!7.05e-09!20;UBERON:0004733!9.41e-09!12;UBERON:0002028!9.41e-09!12;UBERON:0007277!9.41e-09!12;UBERON:0003080!1.25e-08!42;UBERON:0004923!1.42e-08!57;UBERON:0000033!3.20e-08!123;UBERON:0003076!3.73e-08!15;UBERON:0003057!3.73e-08!15;UBERON:0002298!4.00e-08!8;UBERON:0004732!6.51e-08!13;UBERON:0000956!9.31e-08!25;UBERON:0000203!9.31e-08!25;UBERON:0000062!6.04e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.97e-12;10!UBERON:0000158;1.97e-12;10!UBERON:0000478;8.52e-11;24!UBERON:0000305;1.53e-10;7!UBERON:0002581;1.22e-08;1!UBERON:0007029;1.22e-08;1!UBERON:0002346;1.92e-08;4!UBERON:0000923;1.92e-08;4!UBERON:0010316;1.92e-08;4!UBERON:0005291;1.92e-08;4!UBERON:0001987;3.10e-08;4!UBERON:0002680;3.48e-08;9!UBERON:0001895;3.48e-08;9!UBERON:0002050;6.45e-07;5!UBERON:0005423;6.45e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.53e-19,14;UBERON:0000158,7.53e-19,14;UBERON:0000478,8.54e-11,24;UBERON:0000305,1.53e-10,7;UBERON:0003124,5.93e-10,7;UBERON:0004871,2.78e-09,8;UBERON:0007029,7.75e-09,1;UBERON:0002581,1.91e-08,1;UBERON:0001987,2.99e-08,4;UBERON:0004340,2.99e-08,4;UBERON:0002680,3.16e-08,9;UBERON:0001895,3.16e-08,9;UBERON:0010092,3.16e-08,9 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.383587685530591,0,0,0,0.795285947051099,2.43317435151318,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,1.18800285728205,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,1.21251028578504,0,1.5119514666484,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.193341436584244,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,3.81991175580304,5.93929361665277,3.37876772309155,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.394573622547734,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,1.87984741883082,5.31985714116385,0.87754158861589,0,0,0.461701551022782,0,0,0,0,1.27600463892768,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.759729551470544,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0,0,0,1.37798474120648,0,0,0.544813624446302,0,0,0,0,0,0.607495566580247,0,0.236417121897595,0.262272940674991,0,0,0,0,0,5.5939078284045,0,0,0,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0.7520696820681,0.919036730290385,0.983617892129413,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,0,0,0.629063767423586,0,0,1.48802444071178,3.96594445628807,0,0,0,0.80057074828547,0,0.6124909547064,0.256916900385838,0,0,1.23069818544453,0,0.622415272177961,0.484426936895553,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.675375846183947,0,0.413373593002368,0.951237152908602,0,0,0,0.527613733078862,0,0,0,0,0,0.266107110487916,0,0,4.82585104135505,1.11813715056843,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,1.1598144313382,1.94284397223656,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0.473314686579554,1.97175321553653,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0.985123076837112,1.33982065078089,0,0.20686599172379,0.639701945702943,0.714193294391221,0.645889098360061,0.186224142887574,0,0.190941474834495,0.202117188958219,0.435433495793923,0.342233301085281,0.134704106029175,0.286888821570705,0.665320713092027,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.383587685530591,0,0,0,0.795285947051099,2.43317435151318,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,1.18800285728205,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,1.21251028578504,0,1.5119514666484,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.193341436584244,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,3.81991175580304,5.93929361665277,3.37876772309155,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.394573622547734,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,1.87984741883082,5.31985714116385,0.87754158861589,0,0,0.461701551022782,0,0,0,0,1.27600463892768,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.759729551470544,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0,0,0,1.37798474120648,0,0,0.544813624446302,0,0,0,0,0,0.607495566580247,0,0.236417121897595,0.262272940674991,0,0,0,0,0,5.5939078284045,0,0,0,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0.7520696820681,0.919036730290385,0.983617892129413,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,0,0,0.629063767423586,0,0,1.48802444071178,3.96594445628807,0,0,0,0.80057074828547,0,0.6124909547064,0.256916900385838,0,0,1.23069818544453,0,0.622415272177961,0.484426936895553,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.675375846183947,0,0.413373593002368,0.951237152908602,0,0,0,0.527613733078862,0,0,0,0,0,0.266107110487916,0,0,4.82585104135505,1.11813715056843,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,1.1598144313382,1.94284397223656,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0.473314686579554,1.97175321553653,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0.985123076837112,1.33982065078089,0,0.20686599172379,0.639701945702943,0.714193294391221,0.645889098360061,0.186224142887574,0,0.190941474834495,0.202117188958219,0.435433495793923,0.342233301085281,0.134704106029175,0.286888821570705,0.665320713092027,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p4@CYP26B1 | |short_description=p4@CYP26B1 | ||
}} | }} |
Latest revision as of 08:25, 18 September 2015
Short description: | p4@CYP26B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CYP26B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546307, NM_019885, uc002sih.1, uc010yrb.1_5end |
EntrezGene: | CYP26B1 |
HGNC: | 20581 |
UniProt: | B7Z2K6Q9NR63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.49e-14 | 5 |
extraembryonic cell | 9.11e-14 | 19 |
placental epithelial cell | 1.03e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.53e-19 | 14 |
membranous layer | 7.53e-19 | 14 |
extraembryonic structure | 8.54e-11 | 24 |
amnion | 1.53e-10 | 7 |
chorion | 5.93e-10 | 7 |
somatic layer of lateral plate mesoderm | 2.78e-09 | 8 |
surface | 7.75e-09 | 1 |
postcentral gyrus | 1.91e-08 | 1 |
placenta | 2.99e-08 | 4 |
allantois | 2.99e-08 | 4 |
regional part of metencephalon | 3.16e-08 | 9 |
metencephalon | 3.16e-08 | 9 |
future metencephalon | 3.16e-08 | 9 |