FFCP PHASE1:Hg19::chr1:163291493..163291582,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10001 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000427213,ENST00000428971,ENST00000439699,ENST00000449680,ENST00000526176,ENST00000528019,ENST00000528689,ENST00000528818,ENST00000530241,ENST00000531954,ENST00000534288,NM_001254748,NR_045630,uc001gco.2_5end | |||
|cluster_id=chr1:163291493..163291582,- | |||
|description=CAGE_peak_2_at_RGS5_5end | |||
|id=chr1:163291493..163291582,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.93e-25!235;DOID:14566!2.50e-25!239;DOID:0050687!1.73e-16!143;DOID:305!3.67e-12!106;DOID:0050686!2.02e-11!137;DOID:2531!2.59e-09!51;DOID:0060083!2.59e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.93e-25,235;DOID:14566,2.49e-25,239;DOID:0050687,1.74e-16,143;DOID:305,3.75e-12,106;DOID:0050686,2.04e-11,137;DOID:2531,2.58e-09,51;DOID:0060083,2.58e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.42e-08!94;UBERON:0001016!1.42e-08!94;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57;UBERON:0001017!3.15e-07!82;UBERON:0005743!7.10e-07!86;UBERON:0002780!8.36e-07!41;UBERON:0001890!8.36e-07!41;UBERON:0006240!8.36e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.51e-09,89;UBERON:0001049,6.11e-08,56;UBERON:0005068,6.11e-08,56;UBERON:0006241,6.11e-08,56;UBERON:0007135,6.11e-08,56;UBERON:0001017,1.51e-07,81;UBERON:0011216,1.81e-07,223;UBERON:0000073,5.74e-07,53;UBERON:0002616,5.74e-07,53;UBERON:0002780,8.33e-07,41;UBERON:0001890,8.33e-07,41;UBERON:0003080,8.33e-07,41;UBERON:0006240,8.33e-07,41 | |||
|phase1_expression=3.63356758541113,2.99740733447376,2.81908808191942,2.00146596706261,4.02264984984559,4.36169262050184,0,3.15859936713415,4.17897005119742,1.72013755551056,2.09340350391728,2.83973783769224,0.791300934685361,3.34169152992126,2.65117900582333,2.6893005858071,3.61616716814386,2.19093027116212,4.39139518911456,3.69363174230364,1.63200552995402,0.940364164434263,7.72837165253853,4.79060487755095,4.5195350254129,13.4487594116394,12.2329878280419,13.4595436046392,1.18009283054671,1.53531759238885,0.619264493264304,0.919421224478927,1.8072355126695,4.06729411183466,14.5638337090967,11.800046296456,5.5784083473621,1.10799081706375,1.20326668482085,1.30206522429511,4.25439401055856,5.83008598834163,3.8636335145128,3.05336301437086,1.51150377475524,2.42584061187816,1.39457422143411,1.23350366406548,1.85823822537062,2.58923153089935,1.5369642391746,2.83778675866302,1.72372840368309,0,1.35426486594342,0.752969358170419,1.91034305040492,1.79778787556068,1.22433556948361,1.60464513538047,1.27867425159808,2.30895910130701,2.79249120670285,1.70489900213078,0.580418477257168,2.8369261234557,1.86846674698672,0,3.12889751052121,4.34377689410233,0.605399502633369,1.10483290796269,2.21523671208619,1.26753171787165,1.4882300997553,1.25795187305026,1.34794357375794,1.20141514273205,2.25015821375912,1.42506371870624,1.19350006319454,1.64397738388171,7.03984977845291,6.55366333514558,5.33705552318133,3.84057200309856,8.40831572775626,6.8970292794538,9.25462821898807,4.77026877267682,2.84606484554724,2.93618594685469,4.58727873750275,5.28685314316103,2.24203425192614,7.90152254325231,5.50787356318733,3.14408610199332,3.08402248499264,9.02807075109662,6.51844533267181,8.04861269749047,11.6896037044747,6.23898558556972,2.94605907474837,5.09527957542329,7.58250818542044,6.66074862573511,6.76308607311367,5.59088875652499,8.0141505157896,6.66547097190621,7.71090128442714,10.1665514674091,5.22677619024884,8.3848913596199,4.21542542962113,4.81078423675682,6.32549230048757,5.73417745783374,9.11516835398986,1.90090408889675,9.78738274005523,10.4949021146623,8.74515085866421,5.91943130110042,5.74789597844733,2.62088766192152,2.40696176205157,3.76543450095277,14.6284119788377,2.68280343881454,1.66221330396589,5.78302643815306,0,3.18662341713812,4.7717156823066,1.94653948121054,5.86115866417221,6.20842312895179,5.79709585574632,6.41797469938792,1.45718115317017,2.22470665670658,4.21911611751088,3.83085422058388,3.0580330919339,3.81584998888547,2.28797964312051,2.97166001063652,1.78886166630035,0.860234595106124,0.694281003215189,1.69592382577203,2.09749718104953,1.6507082516404,2.08994966536811,4.65150166504792,6.75955899104749,5.35552980423472,0.402829317109147,0.760272105718513,0.976248230192678,2.57364156242108,0.81014194788176,4.01848777278359,5.61323431565425,4.27923625836624,6.13266549863533,0,0.732806975721629,0,0,0.872188104285069,0.496971951695318,4.05217637326655,11.6520079115633,16.3496873826824,5.67469411517371,3.92474320099615,1.06748995729705,1.97334038733728,7.46906484959439,5.52313755485721,4.90385709340376,2.4217188423189,1.15235184896,1.40592859100278,4.05808099879417,3.4228309292667,3.13842229158782,6.3414629267633,5.82742599725274,5.61803226808994,8.37032102145062,6.26455018290017,10.125926555225,5.94001428641027,2.71993622206413,2.73048408581408,0.718618141816238,8.58514181165738,7.63222971218981,8.86605169549385,3.07284334616587,2.14541457059314,1.35214253015937,2.04177929688038,11.3015470483983,4.27114777637135,4.66250182551036,10.5031883629541,5.04957393268351,9.01741890159702,2.60563598864226,8.77636927654584,4.38466523225394,9.34004964703224,5.43094401989566,6.62748832957129,7.10019185033229,4.73534861669909,3.89989362314122,2.51239109112286,3.27295344709002,4.01526433544605,4.51302712679503,5.83130980614535,4.53156377191122,5.59769697083,5.04641701751257,6.93456982244077,7.8224766164908,1.92972281457866,4.14404764057442,6.03678306441573,0.721879481669586,5.44211280183282,3.20310911148393,3.61516544825223,5.4044046638873,4.79334777003293,3.32178866755535,5.66291494272691,5.88664395376038,2.69323009862473,2.21446636387394,0,0.8231480226628,2.94017422771084,8.87285243752816,2.94848165003288,2.95394953340702,24.7219335672204,8.48620225947483,3.25978839567199,1.53650399572076,1.1240175325762,2.41269533787914,2.87024179991442,2.6064664424826,3.11980435583874,1.44331342025273,3.4779121492523,1.99594780200897,1.44366447761074,1.85194205030644,2.66355813128438,3.1608175918371,3.43394464837949,5.66299114001014,6.55211942389866,3.41851673264075,3.74935335947108,2.85569617938061,2.26840155587818,4.74660170325096,3.48760726216754,2.68367875415648,20.6918559916296,5.19485760678034,1.65862492432618,3.17063897517315,2.65109110195398,2.85740524314761,1.90994212779139,2.34434894420094,0,2.77634230298973,1.20137223137567,2.5724378936752,4.37311228946907,3.48768055066624,3.9602674343313,1.55126058909333,3.57656445851882,1.690605505112,3.72313363218819,5.2003718455683,2.31486636835928,2.83698264046557,2.39779961114489,4.14636181608628,0.542621605391443,1.64648067356154,2.93162565864362,3.909311436168,2.37585561880029,4.82303003295338,1.74306691720059,2.29937879718731,0,1.00451418286425,0,1.91699884393266,2.29723871668228,4.27910715122155,4.1986578933598,7.19167128926342,4.29746311775749,8.6305560875016,2.75843064282698,1.94064817373566,1.54011643535698,5.33598710867173,7.8083912314573,3.86644406388848,4.18790663335872,3.82763250991898,2.24702107184155,2.99161459204025,0.414415513436035,4.04881922673162,3.50119364741774,3.52644530809656,4.15941723061614,2.14114786556594,1.89242898040722,1.87426263988341,1.80567659836631,2.27407504055985,2.0694614258501,1.99267679560631,1.29058417979192,7.29822361531896,0.979005787313703,1.02943027143257,4.54889657470352,4.96142661882819,2.881644060693,1.81876542867756,0,0.604780586659361,1.73675465473144,4.60385919864187,2.80660094433074,3.45975702990393,2.55853624533352,3.21707842287215,0,3.85524234506639,2.84098760501003,4.84550220481474,4.15403543346897,2.90525946149898,8.58102092100518,4.0101294060657,6.07734526976916,5.1666501674073,6.19109971222838,3.93373244878272,0.451199612907412,2.38747545023686,0.784349769176855,0,2.42768746453614,1.13733384070897,2.89159298970077,2.37507507712353,0,1.89662506280697,1.00337954770971,3.56826782263054,2.49322802678617,0.671624264166535,13.1555925987561,13.3332080022699,3.59030175162945,0.984043937099117,5.53143270929315,4.73988653579522,6.3182930724657,6.43574099380586,1.72279661398852,0.650060246036521,1.6068392984416,4.15684088656124,6.47004191881506,5.06562126596228,4.54860689198951,7.94909812025225,4.93056759308377,4.85791776271775,2.22580089116843,4.95854746082934,3.2672311452068,31.1375018486785,3.8439956725109,3.253918845081,10.3888074454111,0,1.54016790088044,3.19383618190213,0,1.8532421910392,3.43499728180779,4.83805880167568,2.53103539774981,1.90630193923825,1.535386747868,3.85145089230528,2.54562598340749,2.35484592059769,4.8565563547495,2.19629623788844,2.70968525395079,1.2130948894399,1.58510321173008,2.10629228119491,1.95053495635836,3.65570234446927,1.05650146756755,6.14249601335936,5.09059555033366,4.52032466480971,2.75682671773062,0.66343897524122,0.876901770507525,1.73632660280006,4.59126326432643,2.02910376962704,2.478587984798,0.845086807596724,4.58916327052965,1.76848273823618,0.7133421029625,8.86902660176495,1.89996871767898,2.96365403663912,2.65631221636001,2.0996083214699,2.02066436723575,1.34060455107157,2.17781969722645,6.96664125748166,0.86101074534246,0,0.886860307073351,2.06751060186264,3.55213326462519,3.82318603571188,0.569647187174163,6.4322579373603,2.87953591160336,2.59389324477087,4.86028293514303,4.75875105776562,4.80708320073629,6.73735898684351,2.20536194382929,18.7661206876976,6.34784537096357,13.3035247061534,6.37705090915289,7.78359548587985,3.25559129225023,6.1385338989926,4.22008522356922,11.5126843026518,3.87998954356427,6.89391541401302,17.5444133963047,5.75592044525451,5.13881840331838,6.45759063011352,9.36861722918718,6.52660155035953,7.98825987201991,8.27601599201939,8.50930622730733,8.20630000688569,7.51696669517154,3.69262196843137,4.8682022125677,3.66379164797602,4.22961015263549,5.23993513143015,3.36968812325356,5.4612234787281,5.90649936670635,5.96685908293468,1.43246690842614,4.75143489332222,2.76444631889309,3.97659059106519,7.31480965334666,7.34637453151179,8.73460533401826,19.4235375477754,3.58646378851925,11.3276405367771,14.1082338798395,1.94310496754094,7.13891871674203,1.86623752597084,3.32512899245109,18.2601598169121,3.06943422136123,2.56472854656027,0,4.44547960578548,5.81599647657131,6.67930306765329,0,2.86470537193757,6.90933999969946,2.17499872630438,6.37243310398798,15.0009653672732,12.5285471337006,13.7897349296586,7.29011533458136,9.37574972639778,2.65722415744152,8.32115426515315,1.52581736317083,5.97128003628613,6.2064999980245,7.67848890038904,17.9748464806334,4.3221360726367,5.07871706125061,4.55768223388005,9.91424788868659,7.090853908372,8.25720026607261,1.5950057986596,2.56473261525214,2.13213910407454,4.08773192782946,8.00599307614626,5.15256213890485,12.1821656733278,12.1558771276999,15.2717644148017,13.8520224888655,10.3308776337246,7.59593032300897,6.20284671004761,2.68570835724488,26.6158026882772,0.995261931078505,3.71521770914025,9.16545217400438,23.1286480370885,12.6035217725433,13.2615875871928,10.1101699471016,2.40773294189637,10.3076356119149,14.5963831372533,12.1312063737896,7.28341138602278,10.2591944740842,6.04953580243319,3.36680037793539,4.67580689250811,23.4504534286608,10.8872600967109,5.31723098165748,8.60579085276297,10.6737192258457,7.16834578637753,9.10750547295337,3.60554149834161,3.99187398170801,4.50765028106137,3.5694274697965,10.8330534310059,7.05142733133628,7.45023750925956,10.4517723433245,7.06192930657599,3.006659511141,7.23700238870302,7.45736444575757,5.75576083516354,5.96143835108969,7.21743073897017,13.884148174171,6.6531820808773,4.90941887900511,5.79447867788178,5.47543585185603,6.07043959679353,15.2719548097148,7.34679469739563,8.82193002514571,8.95637331543823,5.97978506723902,6.79918501030166,7.85386275799678,11.5580235960608,7.20504346451747,10.4048087957915,1.27746588066972,3.0083580899397,2.62887354279315,5.58564802544508,7.33313356837388,6.46085722119133,2.79550600698588,3.004582336956,1.11585728720936,6.24806294126554,3.60299883542404,9.31967596219631,6.30265458457789,7.25259553754265,7.27958273625197,6.39778629845867,10.1607998478941,3.18091875923721,9.94284864614502,4.34033500855552,4.53880140770872,7.47792608452533,2.69968669861801,1.5476039091159,6.13570522246049,9.39217125277945,3.54625682846392,4.56354916774483,0.739202355635845,8.60579228797655,8.0604382874167,4.2881719582402,3.31045985182716,2.79695391420225,5.42999601753713,2.5926644736038,5.55198512185996,0,4.843458724211,10.2232813071253,4.07923529472452,2.93104467356165,2.65013777824443,9.17908990167009,9.91744513070175,3.76391043345525,14.0963004463334,1.60181118851542,12.4191401028736,4.55662960881915,4.46549419630756,6.32357222073422,15.5894525927547,18.5118964753353,3.26410682021684,1.7548292581589,2.14441903734423,2.95085367638824,8.79502939001312,2.65820453990096,6.71144456960797,9.89008352581349,10.8947747181114,10.0945436898536,8.19672518826262,21.3056897801795,9.99843263696853,11.9802802857902,12.2750093424336,2.58792401667989,15.923386797434,16.2311552044124,2.53733164907686,5.14169281663894,5.54805861502613,3.97746311077687,4.52822223154635,3.55924488638614,2.74608082076308,2.7221566277383,3.57505561340395,3.54852359975121,3.02663857611035,6.74704668245407,2.79473322377267,3.31764966272684,3.45594228925393,3.1304703708704,1.35231848097497,1.14241563650639,6.91680246447925,2.54588122883583,1.07410557042488,1.39210127963548,1.19428766609585,4.40030541129469,3.77735275701072,4.37774335395695,3.78554694685953,5.7785949122191,4.07439023612359,7.30784017502592,4.30741258473318,12.0391686648394,5.13947079463582,9.31261973623734,3.08801447160972,3.0699766941019,3.88716121080938,4.24410884196013,6.08192786351062,11.5308683364576,7.25403717635517,3.03859956177382,10.3693827113798,2.53318401491205,3.05589132720735,4.41626564490779,6.22458712808184,3.93236654005951,3.16968185037941,6.39959666735776,15.3636090759563,16.1882080881167,5.10764358210152,12.703310567377,6.01481883193611,4.35454082023081,27.1136067163742,16.281546520899,15.7265941855896,15.835397537842,9.16555661751736,14.2425196468128,2.97445834221605,7.82102885162541,2.54403480522735,17.3495839002757,19.2136979588513,1.41070377476274,2.1437183414724,8.28557003744328,5.6678630530234,8.93949610720047,7.99953820538945,2.52071696221718,4.08027789538886,13.0795272961799,9.99385941814081,13.5443851531415,7.66803201760312,6.9702867438238,7.855745298223,1.52552838186867,5.52287940848081,8.55339755099981,4.96388167105098,7.0596774046232,0.781514011233092,5.50004058410987,5.56824519534329,3.40068998299204,8.50973566191773,7.02970288752463,7.85409826704499,6.72207588055412,6.01672289920042,1.64477330057155,5.95453414067153,2.11045493231545,2.04419884223352,6.42842203053944,11.0973628332212,8.49751845931284,16.847002159996,4.3464161379693,11.6386327431337,6.17356833974707,9.6517020827101,4.80141247008798,8.62815038452968,13.5702310308324,5.65150268523701,9.26981980504411,5.32517110296199,10.9579046461139,5.39818978046554,3.8220135030964,7.21913096184229,10.9029392095581,3.83596703714813,12.6916538780883,1.60342272946051,3.72989095493466,8.02376842341565,8.2951159417691,5.16272830584333,5.08827603141431,5.0275908807903,4.65725755210022,12.1426640328347,2.17144469965024,5.7332336338646,4.47421727191169,4.1223098118402,4.51096322434397,1.29485767437579,1.02662806856247,1.1598144313382,5.34282092365053,6.78424444040106,15.7171112377481,5.47032417576815,18.7490496184674,11.5437542582701,15.3982100438007,4.63044948647668,6.55678681511872,8.93602863086893,4.90296643507811,8.72003224276016,11.7785080268967,12.1789024134105,8.0304588240846,2.37897960562944,4.51122806303297,3.86747327841463,8.9947040332436,5.71372603538104,18.7034282009317,5.2959302014851,3.65168194123259,4.12856355064087,11.0371479026618,7.57303498527286,4.48743835260037,4.36350690340377,6.87734892670021,4.83593523616777,5.0839319149456,3.02838593486652,8.57931688878537,12.3470096318976,4.68784453742317,4.07955318967927,10.4214788053569,8.36243585767089,10.7804241895721,9.24500118262521,11.5224575967157,10.7792027129641,13.4462894620464,8.31612529413825,14.0458014563607,8.59032500818881,11.4217474304379,8.40988969354601,3.6278880218554,9.70162506999453,6.31378568901188,3.08009970976753,5.99433271829829,5.30744319905805,4.32458463509817,9.68698896470597,7.47091421144008,1.9307228228694,3.59300808426348,4.69281884806909,6.60103798587479,6.10344267473608,0.665756774185513,4.6292972525936,10.2581917537035 | |||
|short_description=p2@RGS5 | |||
}} |
Latest revision as of 08:15, 18 September 2015
Short description: | p2@RGS5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGS5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000427213, ENST00000428971, ENST00000439699, ENST00000449680, ENST00000526176, ENST00000528019, ENST00000528689, ENST00000528818, ENST00000530241, ENST00000531954, ENST00000534288, NM_001254748, NR_045630, uc001gco.2_5end |
EntrezGene: | RGS5 |
HGNC: | 10001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.51e-09 | 89 |
neural tube | 6.11e-08 | 56 |
neural rod | 6.11e-08 | 56 |
future spinal cord | 6.11e-08 | 56 |
neural keel | 6.11e-08 | 56 |
central nervous system | 1.51e-07 | 81 |
organ system subdivision | 1.81e-07 | 223 |
regional part of nervous system | 5.74e-07 | 53 |
regional part of brain | 5.74e-07 | 53 |
regional part of forebrain | 8.33e-07 | 41 |
forebrain | 8.33e-07 | 41 |
anterior neural tube | 8.33e-07 | 41 |
future forebrain | 8.33e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.93e-25 | 235 |
disease of cellular proliferation | 2.49e-25 | 239 |
cell type cancer | 1.74e-16 | 143 |
carcinoma | 3.75e-12 | 106 |
organ system cancer | 2.04e-11 | 137 |
hematologic cancer | 2.58e-09 | 51 |
immune system cancer | 2.58e-09 | 51 |