FFCP PHASE1:Hg19::chr1:163291493..163291582,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8490 | |EntrezGene=8490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10001 | |HGNC=10001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000427213,ENST00000428971,ENST00000439699,ENST00000449680,ENST00000526176,ENST00000528019,ENST00000528689,ENST00000528818,ENST00000530241,ENST00000531954,ENST00000534288,NM_001254748,NR_045630,uc001gco.2_5end | |association_with_transcript=0bp_to_ENST00000427213,ENST00000428971,ENST00000439699,ENST00000449680,ENST00000526176,ENST00000528019,ENST00000528689,ENST00000528818,ENST00000530241,ENST00000531954,ENST00000534288,NM_001254748,NR_045630,uc001gco.2_5end | ||
|cluster_id=chr1:163291493..163291582,- | |||
|description=CAGE_peak_2_at_RGS5_5end | |description=CAGE_peak_2_at_RGS5_5end | ||
|id=chr1:163291493..163291582,- | |id=chr1:163291493..163291582,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.93e-25!235;DOID:14566!2.50e-25!239;DOID:0050687!1.73e-16!143;DOID:305!3.67e-12!106;DOID:0050686!2.02e-11!137;DOID:2531!2.59e-09!51;DOID:0060083!2.59e-09!51 | |ontology_enrichment_disease=DOID:162!1.93e-25!235;DOID:14566!2.50e-25!239;DOID:0050687!1.73e-16!143;DOID:305!3.67e-12!106;DOID:0050686!2.02e-11!137;DOID:2531!2.59e-09!51;DOID:0060083!2.59e-09!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.93e-25,235;DOID:14566,2.49e-25,239;DOID:0050687,1.74e-16,143;DOID:305,3.75e-12,106;DOID:0050686,2.04e-11,137;DOID:2531,2.58e-09,51;DOID:0060083,2.58e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.42e-08!94;UBERON:0001016!1.42e-08!94;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57;UBERON:0001017!3.15e-07!82;UBERON:0005743!7.10e-07!86;UBERON:0002780!8.36e-07!41;UBERON:0001890!8.36e-07!41;UBERON:0006240!8.36e-07!41 | |ontology_enrichment_uberon=UBERON:0000073!1.42e-08!94;UBERON:0001016!1.42e-08!94;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57;UBERON:0001017!3.15e-07!82;UBERON:0005743!7.10e-07!86;UBERON:0002780!8.36e-07!41;UBERON:0001890!8.36e-07!41;UBERON:0006240!8.36e-07!41 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.51e-09,89;UBERON:0001049,6.11e-08,56;UBERON:0005068,6.11e-08,56;UBERON:0006241,6.11e-08,56;UBERON:0007135,6.11e-08,56;UBERON:0001017,1.51e-07,81;UBERON:0011216,1.81e-07,223;UBERON:0000073,5.74e-07,53;UBERON:0002616,5.74e-07,53;UBERON:0002780,8.33e-07,41;UBERON:0001890,8.33e-07,41;UBERON:0003080,8.33e-07,41;UBERON:0006240,8.33e-07,41 | |||
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| ||
|short_description=p2@RGS5 | |short_description=p2@RGS5 | ||
}} | }} |
Latest revision as of 08:15, 18 September 2015
Short description: | p2@RGS5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGS5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000427213, ENST00000428971, ENST00000439699, ENST00000449680, ENST00000526176, ENST00000528019, ENST00000528689, ENST00000528818, ENST00000530241, ENST00000531954, ENST00000534288, NM_001254748, NR_045630, uc001gco.2_5end |
EntrezGene: | RGS5 |
HGNC: | 10001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.51e-09 | 89 |
neural tube | 6.11e-08 | 56 |
neural rod | 6.11e-08 | 56 |
future spinal cord | 6.11e-08 | 56 |
neural keel | 6.11e-08 | 56 |
central nervous system | 1.51e-07 | 81 |
organ system subdivision | 1.81e-07 | 223 |
regional part of nervous system | 5.74e-07 | 53 |
regional part of brain | 5.74e-07 | 53 |
regional part of forebrain | 8.33e-07 | 41 |
forebrain | 8.33e-07 | 41 |
anterior neural tube | 8.33e-07 | 41 |
future forebrain | 8.33e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.93e-25 | 235 |
disease of cellular proliferation | 2.49e-25 | 239 |
cell type cancer | 1.74e-16 | 143 |
carcinoma | 3.75e-12 | 106 |
organ system cancer | 2.04e-11 | 137 |
hematologic cancer | 2.58e-09 | 51 |
immune system cancer | 2.58e-09 | 51 |