FFCP PHASE1:Hg19::chr6:33756838..33756860,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221496 | |EntrezGene=221496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21244 | |HGNC=21244 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_uc003ofe.2_5end | |association_with_transcript=41bp_to_uc003ofe.2_5end | ||
|cluster_id=chr6:33756838..33756860,- | |||
|description=CAGE_peak_3_at_LEMD2_5end | |description=CAGE_peak_3_at_LEMD2_5end | ||
|id=chr6:33756838..33756860,- | |id=chr6:33756838..33756860,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.50e-12;5!CL:0000775;2.10e-08;3!CL:0000094;9.94e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.46e-11,5;CL:0000775,1.24e-08,3;CL:0000094,9.35e-08,8;CL:0000039,9.87e-07,7;CL:0000586,9.87e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.96e-09;10!UBERON:0005564;3.96e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.61e-07!21;UBERON:0009196!1.61e-07!21;UBERON:0009117!1.61e-07!21;UBERON:0005564!1.61e-07!21;UBERON:0000468!2.14e-07!659;UBERON:0004176!3.27e-07!22;UBERON:0003133!9.23e-07!48 | |ontology_enrichment_uberon=UBERON:0000991!1.61e-07!21;UBERON:0009196!1.61e-07!21;UBERON:0009117!1.61e-07!21;UBERON:0005564!1.61e-07!21;UBERON:0000468!2.14e-07!659;UBERON:0004176!3.27e-07!22;UBERON:0003133!9.23e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.24e-08;8!UBERON:0000991;8.21e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.10e-08,8;UBERON:0000991,4.25e-07,21;UBERON:0009196,4.25e-07,21;UBERON:0009117,4.25e-07,21;UBERON:0005564,4.25e-07,21 | |||
|phase1_expression=1.45342703416445,1.07050261945492,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.984968464614303,1.63200552995402,0,0.286235987131057,0.958120975510189,1.00434111675842,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.767658796194425,1.08371286321253,0,0.6024118375565,0,0.387336002901508,0.142169232487422,0,0,1.00272223735071,1.08505435357926,0.447830948479849,0,0,0.726991193897824,1.13362783106643,0.727752183563449,1.16214518452842,1.23350366406548,0,0.575384784644301,0.512321413058201,0.47296445977717,0.689491361473237,0.645484683583826,0,1.31769637679823,0.272906150057846,0.449446968890169,0.612167784741805,0.641858054152187,0,0.659702600373432,0.997318288108159,0.852449501065388,0.580418477257168,1.70215567407342,0.622822248995575,0.251248665256743,1.0429658368404,0,0.605399502633369,0.368277635987565,0,0.211255286311942,0.850417199860174,0,0.786300418025466,0.450530678524519,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0.764546456250458,0,0,0,0.196709770113833,0,0,0,0.651844533267181,0,0,0.111410456885174,1.17842362989935,0.221533894583621,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0.453237370790265,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0.795285947051099,0.973269740605272,0.567208902984407,0,0.966182642624386,0.392937226493138,0,0,0.649094787309367,0,0.132957960518865,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0,0,0.417989933073621,0.775250277507987,0.71153252537342,2.00832367658802,1.61131726843659,0,0.732186172644509,0.367663080345869,0.81014194788176,0.892997282840798,0.898117490504679,1.12611480483322,0,0,0.366403487860815,1.31780417436063,0,0.436094052142534,0,0.506522046658319,2.38336525463794,1.14734648299525,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0.490385709340376,0.454072282934794,0.576175924479999,0.468642863667593,0,1.1409436430889,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0,0.309977343527296,0,0.494533858557114,0,0,0,0,0.277064115484183,0,0,0.600952235626387,0.453728732640084,1.97328599257748,0,0.635795703478686,1.50045548042201,0.206105058476878,2.31876486041066,0.18611685633159,2.36286865137773,0.974370051611986,1.7670364197088,0.552299391853796,0.161646056818812,1.77504796258307,0.302256294682921,0.67824236924195,0.773043412653187,0.272746120590835,0,1.34171076742555,1.45782745153634,1.04574548582567,1.0366105501537,1.00928340350251,0.36497735907583,0,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,0,0.245976877086227,0.171567810298526,0.439001141634502,0,0,0,0,1.03993478527958,0,0.463721619900307,0.117408694235822,0.577465791044295,0,0.380508304469197,0.790204397959275,0,0.492434012174795,0,0.297262324577456,1.87467667973554,0.335964256397719,0.283550194484773,0.358234090811393,0,0,0,0,0.621984346622316,0.144119953416961,0.37872730027914,0.190493682876507,1.14596527667483,0,0,0.205654985406647,0,0.285826432630578,0.336393253036082,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,2.08014873822732,0,1.41849132023278,0,0.285955987316295,0.542621605391443,0,0,0,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0.502257091432126,0,0.239624855491583,0,1.42636905040718,0.723906533337896,0.410952645100767,0.895304816199478,0,0.394061520403854,0.215627574859517,0.128343036279748,0.76228387266739,0,2.31986643833309,0.167516265334349,0,1.49801404789436,2.99161459204025,1.24324654030811,0,0,0.271265023699736,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0.343143423810856,0.206768026122887,0.647142602455851,0.426910231213777,1.21251028578504,0,0.30239029332968,1.24053903909388,2.91577749247319,0.561320188866147,0.128139149255701,0.511707249066704,0.321707842287215,0,0.308419387605311,0.355123450626254,0.0821271560138091,1.03850885836724,0.116210378459959,0.604297247958111,0.40101294060657,0,0.114814448164607,0.364182336013434,0.524497659837696,0,0,0,0,0.105551628892876,0,0.340187410553031,0,4.62681758070868,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.206082023295445,1.09883357782012,0.41254749960294,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0.460511024178389,0.275673144969061,0.214840489736547,0,0.255679882248303,0.0890320356467374,0,0,2.16941611240793,0.2023155617111,0,0.94443704049192,0,0.924100740528266,0,0,0.18532421910392,0.572499546967965,0.372158369359667,0.316379424718726,0.38126038784765,0.511795582622668,0.42793898803392,0.95460974377781,0,0.539617372749944,0,0.1178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|phase1_expression=1.45342703416445,1.07050261945492,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.984968464614303,1.63200552995402,0,0.286235987131057,0.958120975510189,1.00434111675842,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.767658796194425,1.08371286321253,0,0.6024118375565,0,0.387336002901508,0.142169232487422,0,0,1.00272223735071,1.08505435357926,0.447830948479849,0,0,0.726991193897824,1.13362783106643,0.727752183563449,1.16214518452842,1.23350366406548,0,0.575384784644301,0.512321413058201,0.47296445977717,0.689491361473237,0.645484683583826,0,1.31769637679823,0.272906150057846,0.449446968890169,0.612167784741805,0.641858054152187,0,0.659702600373432,0.997318288108159,0.852449501065388,0.580418477257168,1.70215567407342,0.622822248995575,0.251248665256743,1.0429658368404,0,0.605399502633369,0.368277635987565,0,0.211255286311942,0.850417199860174,0,0.786300418025466,0.450530678524519,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0.764546456250458,0,0,0,0.196709770113833,0,0,0,0.651844533267181,0,0,0.111410456885174,1.17842362989935,0.221533894583621,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0.453237370790265,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0.795285947051099,0.973269740605272,0.567208902984407,0,0.966182642624386,0.392937226493138,0,0,0.649094787309367,0,0.132957960518865,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0,0,0.417989933073621,0.775250277507987,0.71153252537342,2.00832367658802,1.61131726843659,0,0.732186172644509,0.367663080345869,0.81014194788176,0.892997282840798,0.898117490504679,1.12611480483322,0,0,0.366403487860815,1.31780417436063,0,0.436094052142534,0,0.506522046658319,2.38336525463794,1.14734648299525,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0.490385709340376,0.454072282934794,0.576175924479999,0.468642863667593,0,1.1409436430889,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0,0.309977343527296,0,0.494533858557114,0,0,0,0,0.277064115484183,0,0,0.600952235626387,0.453728732640084,1.97328599257748,0,0.635795703478686,1.50045548042201,0.206105058476878,2.31876486041066,0.18611685633159,2.36286865137773,0.974370051611986,1.7670364197088,0.552299391853796,0.161646056818812,1.77504796258307,0.302256294682921,0.67824236924195,0.773043412653187,0.272746120590835,0,1.34171076742555,1.45782745153634,1.04574548582567,1.0366105501537,1.00928340350251,0.36497735907583,0,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,0,0.245976877086227,0.171567810298526,0.439001141634502,0,0,0,0,1.03993478527958,0,0.463721619900307,0.117408694235822,0.577465791044295,0,0.380508304469197,0.790204397959275,0,0.492434012174795,0,0.297262324577456,1.87467667973554,0.335964256397719,0.283550194484773,0.358234090811393,0,0,0,0,0.621984346622316,0.144119953416961,0.37872730027914,0.190493682876507,1.14596527667483,0,0,0.205654985406647,0,0.285826432630578,0.336393253036082,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,2.08014873822732,0,1.41849132023278,0,0.285955987316295,0.542621605391443,0,0,0,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0.502257091432126,0,0.239624855491583,0,1.42636905040718,0.723906533337896,0.410952645100767,0.895304816199478,0,0.394061520403854,0.215627574859517,0.128343036279748,0.76228387266739,0,2.31986643833309,0.167516265334349,0,1.49801404789436,2.99161459204025,1.24324654030811,0,0,0.271265023699736,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0.343143423810856,0.206768026122887,0.647142602455851,0.426910231213777,1.21251028578504,0,0.30239029332968,1.24053903909388,2.91577749247319,0.561320188866147,0.128139149255701,0.511707249066704,0.321707842287215,0,0.308419387605311,0.355123450626254,0.0821271560138091,1.03850885836724,0.116210378459959,0.604297247958111,0.40101294060657,0,0.114814448164607,0.364182336013434,0.524497659837696,0,0,0,0,0.105551628892876,0,0.340187410553031,0,4.62681758070868,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.206082023295445,1.09883357782012,0.41254749960294,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0.460511024178389,0.275673144969061,0.214840489736547,0,0.255679882248303,0.0890320356467374,0,0,2.16941611240793,0.2023155617111,0,0.94443704049192,0,0.924100740528266,0,0,0.18532421910392,0.572499546967965,0.372158369359667,0.316379424718726,0.38126038784765,0.511795582622668,0.42793898803392,0.95460974377781,0,0.539617372749944,0,0.1178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| ||
|short_description=p3@LEMD2 | |short_description=p3@LEMD2 | ||
}} | }} |
Latest revision as of 08:15, 18 September 2015
Short description: | p3@LEMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LEMD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_uc003ofe.2_5end |
EntrezGene: | LEMD2 |
HGNC: | 21244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.46e-11 | 5 |
neutrophil | 1.24e-08 | 3 |
granulocyte | 9.35e-08 | 8 |
germ line cell | 9.87e-07 | 7 |
germ cell | 9.87e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.10e-08 | 8 |
gonad | 4.25e-07 | 21 |
indifferent external genitalia | 4.25e-07 | 21 |
indifferent gonad | 4.25e-07 | 21 |
gonad primordium | 4.25e-07 | 21 |