FFCP PHASE1:Hg19::chr13:99738867..99738880,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:99738867..99738880,- to FFCP PHASE1:Hg19::chr13:99738867..99738880,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23348 | |EntrezGene=23348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14132 | |HGNC=14132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000427887_5end | |||
|cluster_id=chr13:99738867..99738880,- | |||
|description=CAGE_peak_4_at_DOCK9_5end | |||
|id=chr13:99738867..99738880,- | |||
|ontology_enrichment_celltype=CL:0002139!8.34e-08!24;CL:0002076!3.43e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.75e-13;24!CL:0000071;6.90e-10;18!CL:0000115;1.23e-07;36!CL:0000791;2.44e-07;18!CL:0000789;2.44e-07;18!CL:0002419;2.44e-07;18!CL:1000413;7.88e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.69e-13,24;CL:0000071,5.03e-10,18;CL:0002546,5.03e-10,18;CL:0000115,1.29e-08,36;CL:0000791,9.17e-08,18;CL:0000789,9.17e-08,18;CL:0002420,9.17e-08,18;CL:0002419,9.17e-08,18;CL:0000790,9.17e-08,18;CL:1000413,5.97e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;6.90e-10;18!CL:0000790;2.44e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-25!115;UBERON:0004119!2.04e-07!169;UBERON:0000925!2.04e-07!169;UBERON:0006595!2.04e-07!169;UBERON:0001049!3.91e-07!57;UBERON:0005068!3.91e-07!57;UBERON:0006241!3.91e-07!57;UBERON:0007135!3.91e-07!57;UBERON:0000064!4.07e-07!219;UBERON:0004111!4.14e-07!241;UBERON:0001007!4.15e-07!155;UBERON:0001555!4.15e-07!155;UBERON:0007026!4.15e-07!155;UBERON:0000153!5.02e-07!129;UBERON:0007811!5.02e-07!129;UBERON:0004921!6.76e-07!129;UBERON:0004185!6.76e-07!129;UBERON:0000477!7.97e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.90e-10;18!UBERON:0001986;6.90e-10;18!UBERON:0004852;6.90e-10;18!UBERON:0000487;6.46e-09;22!UBERON:0004921;2.37e-08;33!UBERON:0000490;1.18e-07;33!UBERON:0006914;2.22e-07;25!UBERON:0001044;5.30e-07;6!UBERON:0003293;5.30e-07;6!UBERON:0003294;5.30e-07;6!UBERON:0010047;5.30e-07;6!UBERON:0003408;5.30e-07;6!UBERON:0000167;5.30e-07;6!UBERON:0003915;7.88e-07;9!UBERON:0004700;7.88e-07;9!UBERON:0001917;7.88e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.78e-16,114;UBERON:0004638,5.03e-10,18;UBERON:0001986,5.03e-10,18;UBERON:0004852,5.03e-10,18;UBERON:0000487,4.72e-09,22;UBERON:0000166,6.12e-08,22;UBERON:0006914,1.70e-07,25;UBERON:0001044,2.10e-07,6;UBERON:0003293,2.10e-07,6;UBERON:0003294,2.10e-07,6;UBERON:0010047,2.10e-07,6;UBERON:0000167,2.10e-07,6;UBERON:0003915,5.97e-07,9;UBERON:0004700,5.97e-07,9;UBERON:0001917,5.97e-07,9 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,1.0007329835313,0,0,2.53299878168311,0,0,0,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0.767658796194425,0.309632246632152,2.75826367343678,0.90361775633475,0.369754010166788,0.697204805222715,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0.768482119587302,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0,0,0.764546456250458,0,1.12101712596307,0,1.37696839079683,1.57204305099666,2.87842098599313,0.334372990781356,0,0.946895611469467,0,1.33692548262208,0.294605907474837,0.221533894583621,0.541607727530031,0.896639238079726,1.30059347559878,1.47994114143309,2.21080014228679,0.579606171470105,2.07601188426885,0.535081656179426,1.04535523804977,0.793165398882963,0.383220493601921,0.68725489096526,0.759059076058509,0.95569624297229,0,2.85135613334512,1.50575119077773,1.15187950038977,0,1.89421801635213,1.64225599384209,3.42731463482045,4.01160293675261,1.44824403882799,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.189069634328136,0,0.263504357079378,0.982343066232845,0.364295288292542,0.370784442784429,0,0,0,0,0,0,3.57772333260069,0.860234595106124,2.42998351125316,2.26123176769604,2.51699661725944,2.20094433552054,1.67195973229448,1.29208379584664,1.42306505074684,1.33888245105868,1.20848795132744,0,3.1728067481262,0.367663080345869,3.24056779152704,1.87529429396568,2.91888184414021,2.13961812918312,0,0,2.01521918323448,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.67355336034844,0.817309515567294,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0,0.113432183160021,0.89694817844431,0,0.211931901159562,0,0.103052529238439,0.515281080091258,0,0.675105328965065,0,0.504867548488229,0.0920498986422993,0,0,0,0.169560592310488,3.47869535693934,4.63668405004419,4.58887352622406,0.121973706129595,0,0.580969714347592,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.964044119533928,0.55146986366197,0.217879444092406,0.71181185733329,0.808987848960987,0.392442930250692,0.38474715694639,0,0,0,0,0,0,1.77236972004421,0,0.614942192715568,0,1.64625428112938,2.24803506515239,0.201057944823262,0.740707561268237,0,0,0,0.115930404975077,0.117408694235822,1.15493158208859,0.462985512576611,1.52203321787679,0,0,0,0,0,0.93733833986777,1.84780341018745,2.41017665312057,0.179117045405697,0.290633938513962,0.383382679165211,0.492663237895943,0.352193736052904,0.207328115540772,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,2.08014873822732,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0.205476322550383,0.537182889719687,2.57795831185113,3.15249216323084,2.58753089831421,1.66845947163673,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0.542530047399471,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,1.44737618286021,1.50999940573032,3.09509917629989,0.909382714338778,0,0.30239029332968,0.248107807818777,0.61384789315225,0.280660094433074,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.966875596732978,2.6065841139427,0.736647911487171,0.34444334449382,0.364182336013434,0.393373244878272,0,0.15403067420883,0.784349769176855,0,0.316654886678627,1.13733384070897,0.340187410553031,1.29549549661284,0,0,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0,0,1.03041011647722,0,0.330037999682352,2.29706215198469,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0.826424576804891,1.15314040419064,3.44554323735377,1.11273558941105,0,0.31481234683064,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.539617372749944,0,0.589062011728432,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0.422215270595328,0.987884678879706,0,0,1.15466535270614,0,0,1.50630081242847,0,0,0.443430153536676,0.459446800413919,0.507447609232169,0,1.13929437434833,0.714695326373367,1.64544909234478,0,0,0,0,0,0,0.185803175125719,0,0.426851060090485,0.159426272728822,0,0.383010740264733,0,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,2.46174797895425,0.270455678475983,0,0,0.561421621224659,4.24873719888493,0,0.111443384277478,0,0.71623345421307,0,0,0.994147647766298,1.1253553312841,0.333926115068718,0.16480387422676,0.422250816255987,1.39473591775749,3.31540698637377,0.755798243562828,0.715880777515084,1.23084805461069,0,0.898683511473268,0.179021174675609,0,0.394573622547734,0,0,0,0.371072392647405,0,0,0.0874599999961957,1.44999915086959,0.455173793141999,3.55955110409873,0.236387681767936,0,0,0.347249989866585,0.885741385813839,0.60298219312704,0,1.54810963903714,0.886642856860642,1.09692698576986,0.21787692703798,0.697118721393016,2.07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| ||
|short_description=p4@DOCK9 | |||
}} | }} |
Latest revision as of 08:13, 18 September 2015
Short description: | p4@DOCK9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DOCK9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000427887_5end |
EntrezGene: | DOCK9 |
HGNC: | 14132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.69e-13 | 24 |
blood vessel endothelial cell | 5.03e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.03e-10 | 18 |
endothelial cell | 1.29e-08 | 36 |
mature alpha-beta T cell | 9.17e-08 | 18 |
alpha-beta T cell | 9.17e-08 | 18 |
immature T cell | 9.17e-08 | 18 |
mature T cell | 9.17e-08 | 18 |
immature alpha-beta T cell | 9.17e-08 | 18 |
endothelial cell of artery | 5.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.78e-16 | 114 |
blood vessel endothelium | 5.03e-10 | 18 |
endothelium | 5.03e-10 | 18 |
cardiovascular system endothelium | 5.03e-10 | 18 |
simple squamous epithelium | 4.72e-09 | 22 |
oral opening | 6.12e-08 | 22 |
squamous epithelium | 1.70e-07 | 25 |
saliva-secreting gland | 2.10e-07 | 6 |
gland of oral region | 2.10e-07 | 6 |
gland of foregut | 2.10e-07 | 6 |
oral gland | 2.10e-07 | 6 |
oral cavity | 2.10e-07 | 6 |
endothelial tube | 5.97e-07 | 9 |
arterial system endothelium | 5.97e-07 | 9 |
endothelium of artery | 5.97e-07 | 9 |