FFCP PHASE1:Hg19::chr9:95726263..95726315,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89846 | |EntrezGene=89846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16027 | |HGNC=16027 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7P2,A8K9G1 | |UniProt=F8W7P2,A8K9G1 | ||
|association_with_transcript=20bp_to_ENST00000416701,uc004asx.2_5end | |association_with_transcript=20bp_to_ENST00000416701,uc004asx.2_5end | ||
|cluster_id=chr9:95726263..95726315,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_FGD3_5end | |description=CAGE_peak_2_at_FGD3_5end | ||
|id=chr9:95726263..95726315,+ | |id=chr9:95726263..95726315,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.84e-59!172;CL:0000566!1.84e-59!172;CL:0000988!3.58e-57!182;CL:0002032!3.86e-54!165;CL:0000837!3.86e-54!165;CL:0000738!2.57e-53!140;CL:0002087!5.73e-42!119;CL:0002031!3.99e-41!124;CL:0000542!2.46e-35!53;CL:0000051!2.46e-35!53;CL:0000838!4.04e-35!52;CL:0000084!1.69e-21!25;CL:0000827!1.69e-21!25;CL:0000763!7.36e-21!112;CL:0000049!7.36e-21!112;CL:0000791!4.12e-17!18;CL:0000789!4.12e-17!18;CL:0002420!4.12e-17!18;CL:0002419!4.12e-17!18;CL:0000790!4.12e-17!18;CL:0000766!1.15e-15!76;CL:0000945!1.15e-12!24;CL:0000826!1.15e-12!24;CL:0000839!1.27e-11!70;CL:0000557!3.04e-11!71;CL:0000625!4.00e-11!11;CL:0002194!2.78e-09!63;CL:0000576!2.78e-09!63;CL:0000040!2.78e-09!63;CL:0000559!2.78e-09!63;CL:0000236!6.96e-09!14;CL:0002057!7.60e-09!42;CL:0002009!1.26e-08!65;CL:0000134!8.71e-08!358;CL:0000860!1.22e-07!45;CL:0002320!5.27e-07!365;CL:0000624!7.76e-07!6 | |ontology_enrichment_celltype=CL:0000037!1.84e-59!172;CL:0000566!1.84e-59!172;CL:0000988!3.58e-57!182;CL:0002032!3.86e-54!165;CL:0000837!3.86e-54!165;CL:0000738!2.57e-53!140;CL:0002087!5.73e-42!119;CL:0002031!3.99e-41!124;CL:0000542!2.46e-35!53;CL:0000051!2.46e-35!53;CL:0000838!4.04e-35!52;CL:0000084!1.69e-21!25;CL:0000827!1.69e-21!25;CL:0000763!7.36e-21!112;CL:0000049!7.36e-21!112;CL:0000791!4.12e-17!18;CL:0000789!4.12e-17!18;CL:0002420!4.12e-17!18;CL:0002419!4.12e-17!18;CL:0000790!4.12e-17!18;CL:0000766!1.15e-15!76;CL:0000945!1.15e-12!24;CL:0000826!1.15e-12!24;CL:0000839!1.27e-11!70;CL:0000557!3.04e-11!71;CL:0000625!4.00e-11!11;CL:0002194!2.78e-09!63;CL:0000576!2.78e-09!63;CL:0000040!2.78e-09!63;CL:0000559!2.78e-09!63;CL:0000236!6.96e-09!14;CL:0002057!7.60e-09!42;CL:0002009!1.26e-08!65;CL:0000134!8.71e-08!358;CL:0000860!1.22e-07!45;CL:0002320!5.27e-07!365;CL:0000624!7.76e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.54e-28;25!CL:0000791;6.60e-24;18!CL:0000789;6.60e-24;18!CL:0002419;6.60e-24;18!CL:0000542;1.44e-23;53!CL:0000625;2.73e-15;11!CL:0000945;1.53e-11;24!CL:0002087;6.94e-11;104!CL:0000236;1.02e-09;13!CL:0000738;1.86e-09;136!CL:0000988;2.94e-09;177!CL:0000624;3.74e-09;6!CL:0000094;1.34e-08;8!CL:0000081;2.24e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.49e-49,168;CL:0000988,4.26e-49,177;CL:0000738,3.64e-43,136;CL:0002032,4.38e-43,161;CL:0000837,4.38e-43,161;CL:0000838,1.51e-40,52;CL:0000542,1.82e-39,53;CL:0000051,1.82e-39,53;CL:0002031,4.58e-30,120;CL:0002087,3.44e-29,115;CL:0000084,2.51e-28,25;CL:0000827,2.51e-28,25;CL:0000791,6.57e-24,18;CL:0000789,6.57e-24,18;CL:0002420,6.57e-24,18;CL:0002419,6.57e-24,18;CL:0000790,6.57e-24,18;CL:0000625,2.70e-15,11;CL:0000763,1.15e-11,108;CL:0000049,1.15e-11,108;CL:0000945,1.69e-11,24;CL:0000826,1.69e-11,24;CL:0000236,1.55e-10,14;CL:0000624,3.79e-09,6;CL:0000094,9.01e-09,8;CL:0000134,1.95e-08,354;CL:0002320,7.93e-08,361;CL:0000081,1.66e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.60e-24;18!CL:0000051;1.44e-23;53 | |||
|ontology_enrichment_disease=DOID:2531!7.23e-13!51;DOID:0060083!7.23e-13!51;DOID:1240!1.40e-09!39 | |ontology_enrichment_disease=DOID:2531!7.23e-13!51;DOID:0060083!7.23e-13!51;DOID:1240!1.40e-09!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.12e-09,51;DOID:0060083,2.12e-09,51;DOID:1240,5.23e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.06e-21!102;UBERON:0003061!1.06e-21!102;UBERON:0002193!1.95e-19!112;UBERON:0007023!1.25e-13!115;UBERON:0000178!5.94e-13!15;UBERON:0000179!5.94e-13!15;UBERON:0000463!5.94e-13!15;UBERON:0002371!1.36e-09!80;UBERON:0002405!5.26e-09!115;UBERON:0001474!5.97e-08!86 | |ontology_enrichment_uberon=UBERON:0002390!1.06e-21!102;UBERON:0003061!1.06e-21!102;UBERON:0002193!1.95e-19!112;UBERON:0007023!1.25e-13!115;UBERON:0000178!5.94e-13!15;UBERON:0000179!5.94e-13!15;UBERON:0000463!5.94e-13!15;UBERON:0002371!1.36e-09!80;UBERON:0002405!5.26e-09!115;UBERON:0001474!5.97e-08!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.09e-18;15!UBERON:0000179;6.09e-18;15!UBERON:0000463;6.09e-18;15!UBERON:0002390;3.09e-13;32!UBERON:0002193;9.84e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.36e-18,15;UBERON:0000179,6.36e-18,15;UBERON:0000463,6.36e-18,15;UBERON:0002390,1.04e-13,98;UBERON:0003061,1.04e-13,98;UBERON:0002193,6.88e-13,108;UBERON:0004177,9.37e-09,7;UBERON:0005057,9.37e-09,7;UBERON:0002384,5.17e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44522898393444,2.79142004129816,2.51874500203774,8.65401409067589,15.7370053219857,6.65709330259127,0,0,0,0.46480320348181,0.284338464974843,2.34880351467878,5.53995408531877,8.42286679374595,9.98250005292918,3.13481663935894,9.39291631455041,2.31818010870768,0.145398238779565,1.13362783106643,0.242584061187816,0.464858073811369,0,0,0.863077176966451,1.5369642391746,0.236482229888585,0,2.5819387343353,0,0.376484679085209,0,0.224723484445085,1.22433556948361,0.320929027076094,0.639337125799041,0,0.997318288108159,0.426224750532694,0.580418477257168,0.56738522469114,1.86846674698672,0.502497330513487,1.0429658368404,0.217188844705117,1.21079900526674,1.47311054395026,0.632924774881769,1.26753171787165,0.637812899895131,0,0.336985893439485,0.150176892841506,0.16072558669708,0.855038231223746,0.79566670879636,1.46131323011707,1.75996244461323,4.36910889009705,3.55803701545422,1.70692089026603,1.20118796110804,4.02326707968138,2.64417949113945,0.954053754535364,3.98449078376614,4.11066032559657,2.29363936875137,2.64342657158052,3.36305137788922,1.84368859342554,63.1438362065404,48.3403238181473,71.7549231508287,129.067974441603,70.3992095928555,79.5392313634352,75.9824240790854,111.521867342059,56.2697283276939,54.4973380675708,81.5119629932697,69.4254952913159,68.9314542067355,97.1828016207726,83.4577053713262,143.742330524586,122.3364146087,132.432709904408,111.853010471325,101.638480399717,61.6984994699093,59.1039206230123,115.123959868874,75.818568609135,63.806178477929,43.7207940446252,67.3070782277644,77.687872970732,78.7063577279779,74.5848343938653,46.8042958244997,36.894034010126,26.7440195783507,58.0745859570024,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.982343066232845,0,0,0.324547393654683,1.0447784237956,0.797747763113191,2.38490624305342,1.71598473234038,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.4341217543427,3.44367627920718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,1.97065295158377,8.62874653329615,8.08579650609011,8.35895729818376,6.18587923789262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,21.7445179347443,38.8150597597797,35.3629222769608,33.6258755052941,0,0,0,0,0,2.99602809578873,2.99161459204025,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.8385487804884,34.5142721309787,38.5286483670434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98836183652353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,28.9245137262337,22.9391162142713,26.2037706100115,36.6876934204995,36.6112423046713,23.3450392029378,30.2417604853344,38.070008462125,0,0,0,0.557409525377156,2.16403819464667,14.5840778864249,0.797131363644112,3.5924286857907,4.5961288831768,2.32840940996271,0.649243880549111,1.96558024679421,9.58585651939407,0.156679895773023,2.50634477090067,11.511840890509,0.481764225311099,0,0.851692475380653,0,0.307240764308458,0.223676107892416,0.333698283423817,1.56310476321632,0,2.46174797895425,9.19549306818343,0,5.63948020351398,0,0.439524537815682,0,5.90649936670635,0,0,0.296964680832639,0,0,0,0,4.44970460412251,0,0.796991953004279,14.3667636076197,0.503865495708552,0,1.47701766553283,0,0,0,0,0.986434056369336,23.948309234694,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0,0.0915975934018623,0.533034776018635,15.3289947293605,0.156980256395025,3.98908036560375,0,0,0,0,7.94682894901893,0,0,6.07818207165946,0,1.99052386215701,1.94606641907346,1.22206028986725,4.44781693020933,5.43681331364613,4.49014382873458,0.134802265961354,0.802577647298789,0,3.10173141666632,0,0,0,4.83962864194656,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.84279131327997,0,0,0,0,0.126621591911757,0,0,1.06726497369676,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,7.62373327410012,0.558564802544508,0.687481272035051,0.717873024576814,0.199679000498991,0.429226048136571,0,0.403100834920358,0,0,0.236349546921671,0.0824158583811665,0.606631894687664,0,4.48768659948658,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.945668487590378,0.524545881349981,0,0,0,0,0,0,0,0,0,0,2.29859058098149,0,0,0.293104467356165,1.32506888912221,0,0.26446520348538,0,0.704815022316672,2.45611048905698,1.25763444079733,6.21358583020793,24.8083010905975,1.58089305518355,1.21792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0.22185810307370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| 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| ||
|short_description=p2@FGD3 | |short_description=p2@FGD3 | ||
}} | }} |
Latest revision as of 07:55, 18 September 2015
Short description: | p2@FGD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FGD3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 20bp_to_ENST00000416701, uc004asx.2_5end |
EntrezGene: | FGD3 |
HGNC: | 16027 |
UniProt: | F8W7P2A8K9G1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.49e-49 | 168 |
hematopoietic cell | 4.26e-49 | 177 |
leukocyte | 3.64e-43 | 136 |
hematopoietic oligopotent progenitor cell | 4.38e-43 | 161 |
hematopoietic multipotent progenitor cell | 4.38e-43 | 161 |
lymphoid lineage restricted progenitor cell | 1.51e-40 | 52 |
lymphocyte | 1.82e-39 | 53 |
common lymphoid progenitor | 1.82e-39 | 53 |
hematopoietic lineage restricted progenitor cell | 4.58e-30 | 120 |
nongranular leukocyte | 3.44e-29 | 115 |
T cell | 2.51e-28 | 25 |
pro-T cell | 2.51e-28 | 25 |
mature alpha-beta T cell | 6.57e-24 | 18 |
alpha-beta T cell | 6.57e-24 | 18 |
immature T cell | 6.57e-24 | 18 |
mature T cell | 6.57e-24 | 18 |
immature alpha-beta T cell | 6.57e-24 | 18 |
CD8-positive, alpha-beta T cell | 2.70e-15 | 11 |
myeloid cell | 1.15e-11 | 108 |
common myeloid progenitor | 1.15e-11 | 108 |
lymphocyte of B lineage | 1.69e-11 | 24 |
pro-B cell | 1.69e-11 | 24 |
B cell | 1.55e-10 | 14 |
CD4-positive, alpha-beta T cell | 3.79e-09 | 6 |
granulocyte | 9.01e-09 | 8 |
mesenchymal cell | 1.95e-08 | 354 |
connective tissue cell | 7.93e-08 | 361 |
blood cell | 1.66e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 6.36e-18 | 15 |
haemolymphatic fluid | 6.36e-18 | 15 |
organism substance | 6.36e-18 | 15 |
hematopoietic system | 1.04e-13 | 98 |
blood island | 1.04e-13 | 98 |
hemolymphoid system | 6.88e-13 | 108 |
hemopoietic organ | 9.37e-09 | 7 |
immune organ | 9.37e-09 | 7 |
connective tissue | 5.17e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.12e-09 | 51 |
immune system cancer | 2.12e-09 | 51 |
leukemia | 5.23e-07 | 39 |