FFCP PHASE1:Hg19::chr11:5264923..5264932,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3044 | |EntrezGene=3044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4828 | |HGNC=4828 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-101bp_to_NR_001589,uc001mag.2_5end | |association_with_transcript=-101bp_to_NR_001589,uc001mag.2_5end | ||
|cluster_id=chr11:5264923..5264932,- | |||
|coexpression_cluster_id=C644 | |||
|description=CAGE_peak_6_at_HBBP1_5end | |description=CAGE_peak_6_at_HBBP1_5end | ||
|id=chr11:5264923..5264932,- | |id=chr11:5264923..5264932,- | ||
|ontology_enrichment_celltype=CL:0000764!1.56e-34!2;CL:0000765!1.56e-34!2;CL:0000050!1.56e-34!2;CL:0000038!1.56e-34!2;CL:0000558!1.56e-34!2;CL:0000547!1.56e-34!2;CL:0000549!1.56e-34!2;CL:0000550!1.56e-34!2;CL:0000552!1.56e-34!2;CL:0000763!3.12e-11!112;CL:0000049!3.12e-11!112;CL:0002032!2.15e-07!165;CL:0000837!2.15e-07!165;CL:0000037!4.63e-07!172;CL:0000566!4.63e-07!172;CL:0002573!9.12e-07!2 | |ontology_enrichment_celltype=CL:0000764!1.56e-34!2;CL:0000765!1.56e-34!2;CL:0000050!1.56e-34!2;CL:0000038!1.56e-34!2;CL:0000558!1.56e-34!2;CL:0000547!1.56e-34!2;CL:0000549!1.56e-34!2;CL:0000550!1.56e-34!2;CL:0000552!1.56e-34!2;CL:0000763!3.12e-11!112;CL:0000049!3.12e-11!112;CL:0002032!2.15e-07!165;CL:0000837!2.15e-07!165;CL:0000037!4.63e-07!172;CL:0000566!4.63e-07!172;CL:0002573!9.12e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.34e-79;2!CL:0000558;2.34e-79;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.34e-79,2;CL:0000765,2.34e-79,2;CL:0000050,2.34e-79,2;CL:0000038,2.34e-79,2;CL:0000558,2.34e-79,2;CL:0000547,2.34e-79,2;CL:0000549,2.34e-79,2;CL:0000550,2.34e-79,2;CL:0000552,2.34e-79,2;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.03e-51!8;DOID:8692!9.23e-26!31;DOID:1240!2.01e-20!39;DOID:8552!2.66e-18!1;DOID:2531!1.52e-15!51;DOID:0060083!1.52e-15!51 | |||
|ontology_enrichment_disease_v019=DOID:8552;6.62e-41;1!DOID:8692;9.21e-11;31!DOID:1240;2.00e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,6.62e-41,1;DOID:8692,2.68e-12,31;DOID:1240,6.08e-10,39;DOID:2531,8.80e-08,51;DOID:0060083,8.80e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19259876645935,2.61435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31331400360688,0.451191321234361,0.784250137270958,0.671286347903371,0,1.90723894776454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19259876645935,2.61435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31331400360688,0.451191321234361,0.784250137270958,0.671286347903371,0,1.90723894776454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@HBBP1 | |short_description=p6@HBBP1 | ||
}} | }} |
Latest revision as of 07:47, 18 September 2015
Short description: | p6@HBBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HBBP1_5end |
Coexpression cluster: | C644_chronic_Reticulocytes_acute_CD34_leukemia_liver_schwannoma |
Association with transcript: | -101bp_to_NR_001589, uc001mag.2_5end |
EntrezGene: | HBBP1 |
HGNC: | 4828 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.34e-79 | 2 |
erythroblast | 2.34e-79 | 2 |
megakaryocyte-erythroid progenitor cell | 2.34e-79 | 2 |
erythroid progenitor cell | 2.34e-79 | 2 |
reticulocyte | 2.34e-79 | 2 |
proerythroblast | 2.34e-79 | 2 |
basophilic erythroblast | 2.34e-79 | 2 |
polychromatophilic erythroblast | 2.34e-79 | 2 |
orthochromatic erythroblast | 2.34e-79 | 2 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 6.62e-41 | 1 |
myeloid leukemia | 2.68e-12 | 31 |
leukemia | 6.08e-10 | 39 |
hematologic cancer | 8.80e-08 | 51 |
immune system cancer | 8.80e-08 | 51 |