FFCP PHASE1:Hg19::chr7:32338899..32338916,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:32338899..32338916,- to FFCP PHASE1:Hg19::chr7:32338899..32338916,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5137 | |EntrezGene=5137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8776 | |HGNC=8776 | ||
|TSSclassifier=strong | |||
|UniProt=E9PE92,Q75MP2 | |UniProt=E9PE92,Q75MP2 | ||
|association_with_transcript=24bp_to_ENST00000396193,uc003tco.1_5end | |||
|cluster_id=chr7:32338899..32338916,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_14_at_PDE1C_5end | |||
|id=chr7:32338899..32338916,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.06e-25;4!UBERON:0007284;2.06e-25;4!UBERON:0003056;4.99e-16;3!UBERON:0008801;2.75e-12;1!UBERON:0004874;2.75e-12;1!UBERON:0006238;1.25e-09;10!UBERON:0006601;5.54e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.07e-49!115;UBERON:0003075!2.62e-22!86;UBERON:0007284!2.62e-22!86;UBERON:0001049!6.15e-22!57;UBERON:0005068!6.15e-22!57;UBERON:0006241!6.15e-22!57;UBERON:0007135!6.15e-22!57;UBERON:0001017!1.50e-21!82;UBERON:0005743!1.79e-21!86;UBERON:0002346!9.20e-21!90;UBERON:0000073!1.87e-20!94;UBERON:0001016!1.87e-20!94;UBERON:0000955!7.67e-19!69;UBERON:0006238!7.67e-19!69;UBERON:0002616!1.03e-17!59;UBERON:0004121!2.23e-16!169;UBERON:0000924!1.22e-15!173;UBERON:0006601!1.22e-15!173;UBERON:0002780!2.01e-15!41;UBERON:0001890!2.01e-15!41;UBERON:0006240!2.01e-15!41;UBERON:0000153!2.25e-15!129;UBERON:0007811!2.25e-15!129;UBERON:0003080!6.66e-15!42;UBERON:0000033!3.45e-14!123;UBERON:0002020!4.22e-14!34;UBERON:0003528!4.22e-14!34;UBERON:0003056!6.96e-14!61;UBERON:0002791!5.16e-13!33;UBERON:0001893!1.74e-12!34;UBERON:0001869!7.51e-11!32;UBERON:0002308!1.12e-10!9;UBERON:0000125!1.12e-10!9;UBERON:0003076!2.01e-08!15;UBERON:0003057!2.01e-08!15;UBERON:0009663!2.45e-08!7;UBERON:0002420!3.09e-08!9;UBERON:0007245!3.09e-08!9;UBERON:0010009!3.09e-08!9;UBERON:0010011!3.09e-08!9;UBERON:0000454!3.09e-08!9;UBERON:0000369!2.38e-07!4;UBERON:0002435!2.38e-07!4;UBERON:0000204!2.38e-07!4;UBERON:0010082!2.38e-07!4;UBERON:0003135!6.29e-07!11;UBERON:0000956!6.35e-07!25;UBERON:0000203!6.35e-07!25;UBERON:0003978!7.78e-07!3;UBERON:0009751!7.78e-07!3;UBERON:0000946!7.78e-07!3;UBERON:0002523!7.78e-07!3;UBERON:0005983!7.78e-07!3;UBERON:0002165!7.78e-07!3;UBERON:0002062!7.78e-07!3;UBERON:0007280!7.78e-07!3;UBERON:0000062!8.41e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.25e-33;3!UBERON:0000946;1.25e-33;3!UBERON:0001905;6.37e-24;2!UBERON:0002757;6.37e-24;2!UBERON:0010134;6.37e-24;2!UBERON:0005408;6.37e-24;2!UBERON:0001899;6.37e-24;2!UBERON:0002133;3.69e-23;2!UBERON:0002134;1.18e-12;1!UBERON:0005208;1.18e-12;1!UBERON:0004145;1.18e-12;1!UBERON:0005946;1.18e-12;1!UBERON:0005965;1.18e-12;1!UBERON:0002078;1.18e-12;1!UBERON:0003296;1.86e-12;4!UBERON:0010133;1.86e-12;4!UBERON:0002784;1.86e-12;4!UBERON:0006834;2.75e-12;1!UBERON:0001831;2.75e-12;1!UBERON:0000989;2.75e-12;1!UBERON:0002135;2.75e-12;1!UBERON:0002146;2.75e-12;1!UBERON:0008811;2.75e-12;1!UBERON:0005623;2.75e-12;1!UBERON:0001567;2.75e-12;1!UBERON:0010313;1.54e-10;10!UBERON:0000966;5.44e-10;5!UBERON:0005388;5.44e-10;5!UBERON:0001802;5.44e-10;5!UBERON:0001894;1.72e-07;7!UBERON:0002081;5.89e-07;2!UBERON:0001829;9.01e-07;2!UBERON:0004089;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,8.46e-34,3;UBERON:0009751,8.46e-34,3;UBERON:0000946,8.46e-34,3;UBERON:0002523,8.46e-34,3;UBERON:0005983,8.46e-34,3;UBERON:0002165,8.46e-34,3;UBERON:0002062,8.46e-34,3;UBERON:0007280,8.46e-34,3;UBERON:0001905,6.38e-24,2;UBERON:0002757,6.38e-24,2;UBERON:0010134,6.38e-24,2;UBERON:0005408,6.38e-24,2;UBERON:0001899,6.38e-24,2;UBERON:0002133,2.49e-23,2;UBERON:0004797,7.03e-15,7;UBERON:0002134,1.25e-12,1;UBERON:0005208,1.25e-12,1;UBERON:0005946,1.25e-12,1;UBERON:0005965,1.25e-12,1;UBERON:0002078,1.25e-12,1;UBERON:0002135,1.75e-12,1;UBERON:0003296,1.86e-12,4;UBERON:0010133,1.86e-12,4;UBERON:0002784,1.86e-12,4;UBERON:0001831,1.96e-12,1;UBERON:0001567,1.96e-12,1;UBERON:0008801,1.96e-12,1;UBERON:0000989,2.46e-12,1;UBERON:0008811,2.46e-12,1;UBERON:0006258,2.46e-12,1;UBERON:0005876,2.46e-12,1;UBERON:0004874,2.46e-12,1;UBERON:0002146,2.75e-12,1;UBERON:0005623,2.75e-12,1;UBERON:0006834,3.85e-12,1;UBERON:0010313,1.37e-10,10;UBERON:0002342,1.37e-10,10;UBERON:0005062,1.37e-10,10;UBERON:0000966,1.87e-08,6;UBERON:0005388,1.87e-08,6;UBERON:0001802,1.87e-08,6;UBERON:0003075,9.90e-08,82;UBERON:0007284,9.90e-08,82;UBERON:0001894,1.72e-07,7;UBERON:0006222,1.72e-07,7;UBERON:0002346,2.48e-07,86;UBERON:0002081,6.07e-07,2;UBERON:0010227,6.07e-07,2;UBERON:0001829,7.61e-07,2;UBERON:0004089,7.61e-07,2;UBERON:0007023,8.74e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,1.14494394852423,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.463721619900307,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68107518185313,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,1.05562704063997,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.384751292518985,0.341826167541004,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0.664653872707185,0,1.2557316736289,0,0,0,0,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.484945082442097,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,1.67569440763353,1.3749625440701,2.15361907373044,0.599037001496973,0.429226048136571,0.223171457441873,0.604651252380536,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0,0.242998226632099,0,0.472834243795189,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,1.52183498429854,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0.320075189082423,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0.126831620387814,0,1.64477330057155,1.48863353516788,0,0,9.10693120993088,16.4779023887224,0.606965604236632,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0.785577949580009,0,0,0,0,2.64463213453628,2.05417695252545,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0.233939463462106,0,0,0,3.4081560191083,0,0.231522474323834,0.218559560503957,0,0,0,0.392616934229891,0,0.8453114551668,0,0.281951753939561,0.257831551894309,0,0,0.705789743431384,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,1.0028301571695,0.303114792872958,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0.25458863311266,0,0.870866991587845,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,1.1001729976458,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,1.14494394852423,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.463721619900307,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68107518185313,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,1.05562704063997,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.384751292518985,0.341826167541004,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0.664653872707185,0,1.2557316736289,0,0,0,0,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.484945082442097,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,1.67569440763353,1.3749625440701,2.15361907373044,0.599037001496973,0.429226048136571,0.223171457441873,0.604651252380536,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0,0.242998226632099,0,0.472834243795189,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,1.52183498429854,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0.320075189082423,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0.126831620387814,0,1.64477330057155,1.48863353516788,0,0,9.10693120993088,16.4779023887224,0.606965604236632,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0.785577949580009,0,0,0,0,2.64463213453628,2.05417695252545,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0.233939463462106,0,0,0,3.4081560191083,0,0.231522474323834,0.218559560503957,0,0,0,0.392616934229891,0,0.8453114551668,0,0.281951753939561,0.257831551894309,0,0,0.705789743431384,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,1.0028301571695,0.303114792872958,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0.25458863311266,0,0.870866991587845,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,1.1001729976458,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p14@PDE1C | |||
}} | }} |
Latest revision as of 07:32, 18 September 2015
Short description: | p14@PDE1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PDE1C_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 24bp_to_ENST00000396193, uc003tco.1_5end |
EntrezGene: | PDE1C |
HGNC: | 8776 |
UniProt: | E9PE92Q75MP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data