FFCP PHASE1:Hg19::chr1:162602212..162602242,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:162602212..162602242,+ to FFCP PHASE1:Hg19::chr1:162602212..162602242,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4921 | |EntrezGene=4921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2731 | |HGNC=2731 | ||
|TSSclassifier=strong | |||
|UniProt=Q16832 | |UniProt=Q16832 | ||
|association_with_transcript=0bp_to_NM_001014796,NM_006182,uc001gcf.2,uc001gcg.2_5end | |||
|cluster_id=chr1:162602212..162602242,+ | |||
|description=CAGE_peak_2_at_DDR2_5end | |||
|id=chr1:162602212..162602242,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.71e-38!180;CL:0000057!1.06e-19!75;CL:0000680!1.43e-15!57;CL:0000056!1.43e-15!57;CL:0000355!1.43e-15!57;CL:0000187!2.80e-14!54;CL:0000222!2.16e-13!119;CL:0000183!1.05e-12!59;CL:0000393!3.12e-11!60;CL:0000211!3.12e-11!60;CL:0000192!6.95e-11!42;CL:0000514!6.95e-11!42;CL:0002620!6.43e-10!23;CL:0000359!2.64e-09!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.88e-10;23!CL:0000359;4.30e-09;32!CL:0000057;6.63e-09;73!CL:0000192;1.29e-08;43!CL:0000187;1.45e-08;55!CL:0000134;1.54e-07;55!CL:0000723;9.24e-07;61!CL:0002320;9.56e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.20e-20,76;CL:0000680,1.54e-16,58;CL:0000056,1.54e-16,58;CL:0000355,1.54e-16,58;CL:0000187,3.47e-15,55;CL:0000222,5.03e-12,121;CL:0000192,1.24e-11,43;CL:0000514,1.24e-11,43;CL:0000393,1.38e-11,61;CL:0000211,1.38e-11,61;CL:0002620,2.74e-10,23;CL:0000359,1.20e-09,32 | |||
|ontology_enrichment_development_v019=CL:0000355;8.67e-09;58!CL:0000514;1.29e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.61e-07;14 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.17e-19!83;UBERON:0002329!1.17e-19!83;UBERON:0003077!1.17e-19!83;UBERON:0003059!1.17e-19!83;UBERON:0007282!1.17e-19!83;UBERON:0009618!1.17e-19!83;UBERON:0007285!1.17e-19!83;UBERON:0004290!1.05e-17!70;UBERON:0002385!1.01e-15!63;UBERON:0001015!1.01e-15!63;UBERON:0000383!1.01e-15!63;UBERON:0001134!2.72e-15!61;UBERON:0002036!2.72e-15!61;UBERON:0003082!2.72e-15!61;UBERON:0000486!1.50e-13!82;UBERON:0004872!3.87e-13!84;UBERON:0002049!7.38e-13!79;UBERON:0007798!7.38e-13!79;UBERON:0001981!4.37e-11!60;UBERON:0007500!4.37e-11!60;UBERON:0004537!4.37e-11!60;UBERON:0006965!4.37e-11!60;UBERON:0000055!2.04e-10!69;UBERON:0001009!5.52e-10!113;UBERON:0004535!6.90e-10!110;UBERON:0001637!3.73e-09!42;UBERON:0003509!3.73e-09!42;UBERON:0004572!3.73e-09!42;UBERON:0004573!7.20e-09!33;UBERON:0004571!7.20e-09!33;UBERON:0005256!1.03e-08!143;UBERON:0000475!1.58e-08!365;UBERON:0002199!2.11e-08!45;UBERON:0002416!2.11e-08!45;UBERON:0002097!4.20e-07!40;UBERON:0003102!4.95e-07!95;UBERON:0000490!5.02e-07!138;UBERON:0000468!6.66e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.23e-09;31!UBERON:0001015;1.23e-09;31!UBERON:0000383;1.23e-09;31!UBERON:0004573;2.42e-08;33!UBERON:0004571;2.42e-08;33!UBERON:0002384;1.08e-07;198!UBERON:0002204;2.12e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.16e-18,73;UBERON:0002329,2.18e-18,71;UBERON:0003059,2.18e-18,71;UBERON:0007282,2.18e-18,71;UBERON:0004290,2.18e-18,71;UBERON:0009618,2.18e-18,71;UBERON:0003077,3.24e-18,72;UBERON:0007285,3.24e-18,72;UBERON:0002385,2.55e-16,64;UBERON:0001015,2.55e-16,64;UBERON:0000383,2.55e-16,64;UBERON:0001134,7.19e-16,62;UBERON:0002036,7.19e-16,62;UBERON:0003082,7.19e-16,62;UBERON:0007503,2.88e-14,78;UBERON:0000486,3.62e-14,83;UBERON:0004872,9.56e-12,83;UBERON:0002049,2.24e-11,78;UBERON:0007798,2.24e-11,78;UBERON:0007500,1.08e-09,59;UBERON:0001981,1.08e-09,59;UBERON:0004537,1.08e-09,59;UBERON:0006965,1.08e-09,59;UBERON:0005256,3.17e-09,122;UBERON:0001009,3.84e-09,112;UBERON:0004535,4.92e-09,109;UBERON:0000055,5.49e-09,68;UBERON:0004573,8.16e-09,33;UBERON:0004571,8.16e-09,33;UBERON:0001637,8.31e-09,42;UBERON:0003509,8.31e-09,42;UBERON:0004572,8.31e-09,42;UBERON:0002199,9.40e-09,46;UBERON:0002416,9.40e-09,46;UBERON:0003104,2.52e-08,160;UBERON:0009142,2.52e-08,160;UBERON:0000490,3.04e-08,148;UBERON:0002097,2.12e-07,41 | |||
|phase1_expression=7.26713517082227,5.1384125733836,9.72585388262201,2.00146596706261,2.68176656656373,3.48935409640147,2.53299878168311,19.5833160762318,7.31319758959548,1.22866968250754,0,0,0.263766978228454,33.4169152992126,17.2326635378516,10.7572023432284,11.4511960324556,9.49403117503585,11.2224543721817,0.984968464614303,1.83600622119828,0,1.14494394852423,1.36874425072884,2.38531015230125,0.0764134057479513,0,0,0,0,1.54816123316076,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,4.87613732627923,5.36560687762909,7.03244090139417,6.50590474292219,10.0267582127178,6.66293987219789,7.95285947051099,2.91980922181582,4.25406677238305,2.4390233720882,1.31752178539689,4.51877810467109,0,0,0,0,0,0,0,0,5.56534740626774,5.16140757063675,3.12426451446835,8.47961912886015,5.87299210693868,0.825354125820202,1.25396979922086,1.8089173141853,2.13459757612026,0,0.805658634218294,2.28081631715554,0.976248230192678,2.94130464276695,0.81014194788176,16.9669483739752,7.4094692966636,5.74318550464943,4.5994991239765,7.59412527654503,4.76324534219059,0,0,0,5.96366342034382,17.0951190747183,20.3910138452357,19.2180535901705,10.2853830837524,3.36406560085384,9.60740961567345,8.14002909776628,14.9381296991888,6.60082293141472,7.68270944633256,11.6545219286597,13.82822218752,8.66989297785048,8.42832207441865,6.84566185853339,9.41526687476347,11.508580867089,7.93177427403845,7.30344194851692,26.5400422631361,12.6519346831121,14.8789124893102,20.1960485737949,8.15980866619238,7.28129089550421,5.03032699271367,21.3786864721664,12.6369705070684,32.9706297426178,11.4134181429018,9.80760946556863,7.06118876861005,2.83580457900053,27.9847831674625,11.1049842185655,12.2920502672546,20.106103437655,9.99609533612857,12.6243864622358,9.30584281657949,36.2869114318722,7.69752340773469,16.6606291001116,13.3472353031334,15.8413135682436,26.2707098462295,14.5083021447802,14.7517715310124,0,0,0,0,0,0.232387885739037,0.621966330092223,0,0,9.38697193978896,12.2215778256648,8.28809528114883,5.10804720835177,10.1063127433742,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,2.8810180793198,0,0,0,2.95394953340702,0,0.122988438543114,4.28919525746314,0,0,0.100528972411631,0,7.81939932744779,0,2.88662684050547,2.31860809950154,4.46153038096122,5.19719211939866,0.462985512576611,13.3177906564219,0,0,0,0,0,0,0,0.141775097242386,1.34337784054272,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,6.92127047784643,7.25778008560728,5.86087236050235,3.4214489204541,5.55268460597947,13.8157806608202,12.862189468376,8.52196241024741,4.3596006883328,21.7081326030012,18.61512706912,7.15312891703765,13.524844040896,21.8069255599594,11.4408180602503,4.62973273671856,4.25547396069835,6.39413229638638,9.0076136004633,1.62786481617433,2.46972101034231,16.2868092146868,10.6617584622764,1.58390374586686,12.359014459443,8.71533458600294,5.99837947092342,0,0,0,17.7322393063771,10.3375742250703,8.5582143024431,17.0841941867743,17.0545347716818,8.77398719875488,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,32.8813197807295,25.5086965740435,7.32415563989286,12.2702808303176,12.3116002270042,8.67363282686641,9.60559602940248,11.736897889381,9.09630016223939,8.27784570340039,12.6202863721733,7.00602840458472,28.324058316595,5.67823356641948,2.40200396667599,0,0,0,0,0,1.20956117331872,8.93188108147597,9.05425642399569,1.40330047216537,9.09787959715477,6.65219423786715,5.62988724002626,1.48418066444991,16.5004372368841,9.76589489222199,30.3049205690956,15.058378446325,13.5966142798152,0,0,0,20.7814151177938,10.5612877443896,6.81846957789005,0,0,0,0,0,0,0,0.215915916102139,0,0.812839312631559,0,0,0,0,0,0,7.1806035032589,1.31205858279882,11.3882438132506,2.67906630284078,6.50143200210238,9.65361149070879,0.574265537996172,0,12.8547143875328,9.57040111092008,10.4753059637958,9.82423518247229,8.95937721149449,32.3334937053504,16.0968530244794,11.9317278382541,7.92385117255962,0,0,0,0,1.85938219718914,22.3516766249754,12.5466708628908,17.249880489861,6.38767236380426,14.7888608652762,12.2313984608587,9.01686786474545,22.7016605309397,13.6043152629052,6.86268698125769,2.303080121802,8.98671874871233,13.6827396608153,1.56989728039846,14.0300516914985,9.60879604076192,7.53999375012393,7.27856933663938,3.17020642346017,3.37006764991185,0,10.4796800541452,5.28250733783777,11.3294926468628,5.65621727814851,11.3008116620243,9.92457618383023,9.28814565337708,8.76901770507525,6.36653087693356,11.1502107847928,8.52223583243357,5.5768229657955,2.53526042279017,12.3333762895484,9.726655060299,6.06340787518125,29.4451683178596,5.69990615303693,8.56166721695745,4.17420491142287,7.34862912514464,0,0,0,3.57746442951761,0,0,0,0,0,0,0,0,0,0,0,0,7.58450905005059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9881134453921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| ||
|short_description=p2@DDR2 | |||
}} | }} |
Latest revision as of 07:28, 18 September 2015
Short description: | p2@DDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001014796, NM_006182, uc001gcf.2, uc001gcg.2_5end |
EntrezGene: | DDR2 |
HGNC: | 2731 |
UniProt: | Q16832 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.20e-20 | 76 |
muscle precursor cell | 1.54e-16 | 58 |
myoblast | 1.54e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.54e-16 | 58 |
muscle cell | 3.47e-15 | 55 |
mesodermal cell | 5.03e-12 | 121 |
smooth muscle cell | 1.24e-11 | 43 |
smooth muscle myoblast | 1.24e-11 | 43 |
electrically responsive cell | 1.38e-11 | 61 |
electrically active cell | 1.38e-11 | 61 |
skin fibroblast | 2.74e-10 | 23 |
vascular associated smooth muscle cell | 1.20e-09 | 32 |