FFCP PHASE1:Hg19::chr1:162602212..162602242,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4921 | |EntrezGene=4921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2731 | |HGNC=2731 | ||
|TSSclassifier=strong | |||
|UniProt=Q16832 | |UniProt=Q16832 | ||
|association_with_transcript=0bp_to_NM_001014796,NM_006182,uc001gcf.2,uc001gcg.2_5end | |association_with_transcript=0bp_to_NM_001014796,NM_006182,uc001gcf.2,uc001gcg.2_5end | ||
|cluster_id=chr1:162602212..162602242,+ | |||
|description=CAGE_peak_2_at_DDR2_5end | |description=CAGE_peak_2_at_DDR2_5end | ||
|id=chr1:162602212..162602242,+ | |id=chr1:162602212..162602242,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.71e-38!180;CL:0000057!1.06e-19!75;CL:0000680!1.43e-15!57;CL:0000056!1.43e-15!57;CL:0000355!1.43e-15!57;CL:0000187!2.80e-14!54;CL:0000222!2.16e-13!119;CL:0000183!1.05e-12!59;CL:0000393!3.12e-11!60;CL:0000211!3.12e-11!60;CL:0000192!6.95e-11!42;CL:0000514!6.95e-11!42;CL:0002620!6.43e-10!23;CL:0000359!2.64e-09!32 | |ontology_enrichment_celltype=CL:0000055!1.71e-38!180;CL:0000057!1.06e-19!75;CL:0000680!1.43e-15!57;CL:0000056!1.43e-15!57;CL:0000355!1.43e-15!57;CL:0000187!2.80e-14!54;CL:0000222!2.16e-13!119;CL:0000183!1.05e-12!59;CL:0000393!3.12e-11!60;CL:0000211!3.12e-11!60;CL:0000192!6.95e-11!42;CL:0000514!6.95e-11!42;CL:0002620!6.43e-10!23;CL:0000359!2.64e-09!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.88e-10;23!CL:0000359;4.30e-09;32!CL:0000057;6.63e-09;73!CL:0000192;1.29e-08;43!CL:0000187;1.45e-08;55!CL:0000134;1.54e-07;55!CL:0000723;9.24e-07;61!CL:0002320;9.56e-07;188 | |ontology_enrichment_celltype_v019=CL:0002620;2.88e-10;23!CL:0000359;4.30e-09;32!CL:0000057;6.63e-09;73!CL:0000192;1.29e-08;43!CL:0000187;1.45e-08;55!CL:0000134;1.54e-07;55!CL:0000723;9.24e-07;61!CL:0002320;9.56e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.20e-20,76;CL:0000680,1.54e-16,58;CL:0000056,1.54e-16,58;CL:0000355,1.54e-16,58;CL:0000187,3.47e-15,55;CL:0000222,5.03e-12,121;CL:0000192,1.24e-11,43;CL:0000514,1.24e-11,43;CL:0000393,1.38e-11,61;CL:0000211,1.38e-11,61;CL:0002620,2.74e-10,23;CL:0000359,1.20e-09,32 | |||
|ontology_enrichment_development_v019=CL:0000355;8.67e-09;58!CL:0000514;1.29e-08;43 | |ontology_enrichment_development_v019=CL:0000355;8.67e-09;58!CL:0000514;1.29e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;9.61e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;9.61e-07;14 | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.17e-19!83;UBERON:0002329!1.17e-19!83;UBERON:0003077!1.17e-19!83;UBERON:0003059!1.17e-19!83;UBERON:0007282!1.17e-19!83;UBERON:0009618!1.17e-19!83;UBERON:0007285!1.17e-19!83;UBERON:0004290!1.05e-17!70;UBERON:0002385!1.01e-15!63;UBERON:0001015!1.01e-15!63;UBERON:0000383!1.01e-15!63;UBERON:0001134!2.72e-15!61;UBERON:0002036!2.72e-15!61;UBERON:0003082!2.72e-15!61;UBERON:0000486!1.50e-13!82;UBERON:0004872!3.87e-13!84;UBERON:0002049!7.38e-13!79;UBERON:0007798!7.38e-13!79;UBERON:0001981!4.37e-11!60;UBERON:0007500!4.37e-11!60;UBERON:0004537!4.37e-11!60;UBERON:0006965!4.37e-11!60;UBERON:0000055!2.04e-10!69;UBERON:0001009!5.52e-10!113;UBERON:0004535!6.90e-10!110;UBERON:0001637!3.73e-09!42;UBERON:0003509!3.73e-09!42;UBERON:0004572!3.73e-09!42;UBERON:0004573!7.20e-09!33;UBERON:0004571!7.20e-09!33;UBERON:0005256!1.03e-08!143;UBERON:0000475!1.58e-08!365;UBERON:0002199!2.11e-08!45;UBERON:0002416!2.11e-08!45;UBERON:0002097!4.20e-07!40;UBERON:0003102!4.95e-07!95;UBERON:0000490!5.02e-07!138;UBERON:0000468!6.66e-07!659 | |ontology_enrichment_uberon=UBERON:0000914!1.17e-19!83;UBERON:0002329!1.17e-19!83;UBERON:0003077!1.17e-19!83;UBERON:0003059!1.17e-19!83;UBERON:0007282!1.17e-19!83;UBERON:0009618!1.17e-19!83;UBERON:0007285!1.17e-19!83;UBERON:0004290!1.05e-17!70;UBERON:0002385!1.01e-15!63;UBERON:0001015!1.01e-15!63;UBERON:0000383!1.01e-15!63;UBERON:0001134!2.72e-15!61;UBERON:0002036!2.72e-15!61;UBERON:0003082!2.72e-15!61;UBERON:0000486!1.50e-13!82;UBERON:0004872!3.87e-13!84;UBERON:0002049!7.38e-13!79;UBERON:0007798!7.38e-13!79;UBERON:0001981!4.37e-11!60;UBERON:0007500!4.37e-11!60;UBERON:0004537!4.37e-11!60;UBERON:0006965!4.37e-11!60;UBERON:0000055!2.04e-10!69;UBERON:0001009!5.52e-10!113;UBERON:0004535!6.90e-10!110;UBERON:0001637!3.73e-09!42;UBERON:0003509!3.73e-09!42;UBERON:0004572!3.73e-09!42;UBERON:0004573!7.20e-09!33;UBERON:0004571!7.20e-09!33;UBERON:0005256!1.03e-08!143;UBERON:0000475!1.58e-08!365;UBERON:0002199!2.11e-08!45;UBERON:0002416!2.11e-08!45;UBERON:0002097!4.20e-07!40;UBERON:0003102!4.95e-07!95;UBERON:0000490!5.02e-07!138;UBERON:0000468!6.66e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.23e-09;31!UBERON:0001015;1.23e-09;31!UBERON:0000383;1.23e-09;31!UBERON:0004573;2.42e-08;33!UBERON:0004571;2.42e-08;33!UBERON:0002384;1.08e-07;198!UBERON:0002204;2.12e-07;70 | |ontology_enrichment_uberon_v019=UBERON:0002385;1.23e-09;31!UBERON:0001015;1.23e-09;31!UBERON:0000383;1.23e-09;31!UBERON:0004573;2.42e-08;33!UBERON:0004571;2.42e-08;33!UBERON:0002384;1.08e-07;198!UBERON:0002204;2.12e-07;70 | ||
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| ||
|short_description=p2@DDR2 | |short_description=p2@DDR2 | ||
}} | }} |
Latest revision as of 07:28, 18 September 2015
Short description: | p2@DDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001014796, NM_006182, uc001gcf.2, uc001gcg.2_5end |
EntrezGene: | DDR2 |
HGNC: | 2731 |
UniProt: | Q16832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.20e-20 | 76 |
muscle precursor cell | 1.54e-16 | 58 |
myoblast | 1.54e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.54e-16 | 58 |
muscle cell | 3.47e-15 | 55 |
mesodermal cell | 5.03e-12 | 121 |
smooth muscle cell | 1.24e-11 | 43 |
smooth muscle myoblast | 1.24e-11 | 43 |
electrically responsive cell | 1.38e-11 | 61 |
electrically active cell | 1.38e-11 | 61 |
skin fibroblast | 2.74e-10 | 23 |
vascular associated smooth muscle cell | 1.20e-09 | 32 |