FFCP PHASE1:Hg19::chr1:162601759..162601770,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:162601759..162601770,+
|short_description=p16@DDR2
|description=CAGE_peak_16_at_DDR2_5end
|association_with_transcript=-30bp_to_ENST00000415555_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4921 | |EntrezGene=4921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2731 | |HGNC=2731 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T244 | |UniProt=Q5T244 | ||
|association_with_transcript=-30bp_to_ENST00000415555_5end | |||
|cluster_id=chr1:162601759..162601770,+ | |||
|description=CAGE_peak_16_at_DDR2_5end | |||
|id=chr1:162601759..162601770,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;5.92e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.79e-26,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.41e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.41e-09;3!DOID:127;1.41e-09;3!DOID:0060072;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.30e-09,3;DOID:127,1.30e-09,3;DOID:0060072,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-41!115;UBERON:0001049!1.38e-22!57;UBERON:0005068!1.38e-22!57;UBERON:0006241!1.38e-22!57;UBERON:0007135!1.38e-22!57;UBERON:0002346!1.65e-20!90;UBERON:0003075!2.23e-19!86;UBERON:0007284!2.23e-19!86;UBERON:0002616!2.97e-18!59;UBERON:0000955!3.23e-18!69;UBERON:0006238!3.23e-18!69;UBERON:0005743!1.22e-17!86;UBERON:0001017!1.64e-17!82;UBERON:0002780!3.33e-17!41;UBERON:0001890!3.33e-17!41;UBERON:0006240!3.33e-17!41;UBERON:0003080!1.19e-16!42;UBERON:0000073!4.68e-15!94;UBERON:0001016!4.68e-15!94;UBERON:0001894!6.58e-14!7;UBERON:0006222!6.58e-14!7;UBERON:0003056!6.86e-12!61;UBERON:0000033!1.43e-09!123;UBERON:0000153!1.70e-09!129;UBERON:0007811!1.70e-09!129;UBERON:0001893!4.55e-09!34;UBERON:0003296!5.34e-09!4;UBERON:0010133!5.34e-09!4;UBERON:0002791!4.10e-08!33;UBERON:0000924!5.15e-08!173;UBERON:0006601!5.15e-08!173;UBERON:0004121!2.66e-07!169;UBERON:0001869!3.40e-07!32;UBERON:0003076!3.62e-07!15;UBERON:0003057!3.62e-07!15;UBERON:0001896!5.47e-07!3;UBERON:0005290!5.47e-07!3;UBERON:0010096!5.47e-07!3;UBERON:0000025!8.07e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.26e-25;4!UBERON:0010133;1.26e-25;4!UBERON:0001894;4.07e-15;7!UBERON:0001905;1.07e-13;2!UBERON:0000007;1.07e-13;2!UBERON:0002757;1.07e-13;2!UBERON:0010134;1.07e-13;2!UBERON:0000078;1.07e-13;2!UBERON:0005408;1.07e-13;2!UBERON:0002012;1.07e-13;2!UBERON:0001899;1.07e-13;2!UBERON:0008886;1.07e-13;2!UBERON:0001896;1.01e-09;3!UBERON:0005290;1.01e-09;3!UBERON:0002784;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.84e-25,4;UBERON:0010133,1.84e-25,4;UBERON:0001894,5.04e-15,7;UBERON:0006222,5.04e-15,7;UBERON:0000007,1.07e-13,2;UBERON:0000078,1.37e-13,2;UBERON:0007497,1.37e-13,2;UBERON:0003643,1.37e-13,2;UBERON:0003504,1.37e-13,2;UBERON:0003469,1.37e-13,2;UBERON:0003496,1.37e-13,2;UBERON:0002012,1.37e-13,2;UBERON:0008886,1.37e-13,2;UBERON:0007303,1.37e-13,2;UBERON:0002061,1.37e-13,2;UBERON:0005432,1.37e-13,2;UBERON:0004363,1.37e-13,2;UBERON:0001905,1.55e-13,2;UBERON:0002757,1.55e-13,2;UBERON:0010134,1.55e-13,2;UBERON:0005408,1.55e-13,2;UBERON:0001899,1.55e-13,2;UBERON:0001896,1.01e-09,3;UBERON:0005290,1.01e-09,3;UBERON:0010096,1.01e-09,3;UBERON:0004145,1.67e-09,3;UBERON:0003075,1.09e-07,82;UBERON:0007284,1.09e-07,82;UBERON:0002784,2.04e-07,4;UBERON:0002346,2.42e-07,86 | |||
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| ||
|short_description=p16@DDR2 | |||
}} | }} |
Latest revision as of 07:27, 18 September 2015
Short description: | p16@DDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_DDR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000415555_5end |
EntrezGene: | DDR2 |
HGNC: | 2731 |
UniProt: | Q5T244 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.79e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.84e-25 | 4 |
neuroendocrine gland | 1.84e-25 | 4 |
diencephalon | 5.04e-15 | 7 |
future diencephalon | 5.04e-15 | 7 |
pituitary gland | 1.07e-13 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.37e-13 | 2 |
developing epithelial placode | 1.37e-13 | 2 |
respiratory system arterial blood vessel | 1.37e-13 | 2 |
respiratory system blood vessel | 1.37e-13 | 2 |
respiratory system artery | 1.37e-13 | 2 |
head blood vessel | 1.37e-13 | 2 |
pulmonary artery | 1.37e-13 | 2 |
pulmonary vascular system | 1.37e-13 | 2 |
pharyngeal vasculature | 1.37e-13 | 2 |
truncus arteriosus | 1.37e-13 | 2 |
aortic sac | 1.37e-13 | 2 |
pharyngeal arch artery | 1.37e-13 | 2 |
pineal body | 1.55e-13 | 2 |
regional part of epithalamus | 1.55e-13 | 2 |
secretory circumventricular organ | 1.55e-13 | 2 |
circumventricular organ | 1.55e-13 | 2 |
epithalamus | 1.55e-13 | 2 |
medulla oblongata | 1.01e-09 | 3 |
myelencephalon | 1.01e-09 | 3 |
future myelencephalon | 1.01e-09 | 3 |
outflow tract | 1.67e-09 | 3 |
neural plate | 1.09e-07 | 82 |
presumptive neural plate | 1.09e-07 | 82 |
regional part of diencephalon | 2.04e-07 | 4 |
neurectoderm | 2.42e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.30e-09 | 3 |
leiomyoma | 1.30e-09 | 3 |
benign neoplasm | 1.59e-07 | 4 |