FFCP PHASE1:Hg19::chr1:45478568..45478588,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:45478568..45478588,+
|short_description=p7@UROD
|description=CAGE_peak_7_at_UROD_5end
|association_with_transcript=0bp_to_ENST00000428106,ENST00000496439_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7389 | |EntrezGene=7389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12591 | |HGNC=12591 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000428106,ENST00000496439_5end | |||
|cluster_id=chr1:45478568..45478588,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_7_at_UROD_5end | |||
|id=chr1:45478568..45478588,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.13e-19;2!CL:0000558;3.13e-19;2!CL:0002601;8.24e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.13e-19,2;CL:0000765,3.13e-19,2;CL:0000050,3.13e-19,2;CL:0000038,3.13e-19,2;CL:0000558,3.13e-19,2;CL:0000547,3.13e-19,2;CL:0000549,3.13e-19,2;CL:0000550,3.13e-19,2;CL:0000552,3.13e-19,2;CL:0000763,2.19e-13,108;CL:0000049,2.19e-13,108;CL:0002601,1.07e-09,1;CL:0002032,3.25e-08,161;CL:0000837,3.25e-08,161;CL:0000037,8.97e-08,168;CL:0000988,2.94e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.32e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.80e-39;8!DOID:8692;3.97e-31;31!DOID:1240;7.23e-20;39!DOID:2531;3.85e-13;51!DOID:0060083;3.85e-13;51!DOID:8552;3.88e-10;1!DOID:9119;8.24e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.44e-39,8;DOID:8692,2.29e-32,31;DOID:1240,2.22e-25,39;DOID:2531,5.30e-19,51;DOID:0060083,5.30e-19,51;DOID:8552,4.06e-10,1;DOID:9119,6.91e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.77e-07!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0.364295288292542,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.772057809126758,0.435758888184812,0.474541238222193,0.674156540800822,0.588664395376038,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.546273504020151,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,169.707144523953,203.135345446348,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0.308033580176089,1.59691809095107,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0,0,0,0.606547444719948,1.58510321173008,0.421258456238981,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0.35667105148125,1.06428319221179,0,0,0,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0,0,0.443430153536676,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0,0,0,0,0.798317485731266,0.383010740264733,0.423347165447766,0,0.280797178113459,0,0.156679895773023,2.50634477090067,0,0,0,0,0,0,0,0,0,0.835218521685727,7.38524393686274,8.11367035427949,1.33228787199128,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0.21787692703798,0,0,0.113942055847001,0,0,0,0,0,0,0,0,3.15802195610297,6.54227415789824,7.84250137270958,5.87375554415449,7.40039557624322,2.06617552674492,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0.290268993867255,0,0.246346371159628,0,0.176512253383001,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0.0787831823072236,0.247247575143499,0.337017719270924,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0.262272940674991,0.105600336519406,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,1.31348033198942,0,0.226624183040251,0.879313402068495,14.5757577803443,0,0,0,0,0,1.25763444079733,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0.249960815924213,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0.196300467230486,0,0,0,0,0.485710993059139,0.233939463462106,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.42265572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| |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0.364295288292542,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.772057809126758,0.435758888184812,0.474541238222193,0.674156540800822,0.588664395376038,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.546273504020151,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,169.707144523953,203.135345446348,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0.308033580176089,1.59691809095107,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0,0,0,0.606547444719948,1.58510321173008,0.421258456238981,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0.35667105148125,1.06428319221179,0,0,0,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0,0,0.443430153536676,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0,0,0,0,0.798317485731266,0.383010740264733,0.423347165447766,0,0.280797178113459,0,0.156679895773023,2.50634477090067,0,0,0,0,0,0,0,0,0,0.835218521685727,7.38524393686274,8.11367035427949,1.33228787199128,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0.21787692703798,0,0,0.113942055847001,0,0,0,0,0,0,0,0,3.15802195610297,6.54227415789824,7.84250137270958,5.87375554415449,7.40039557624322,2.06617552674492,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0.290268993867255,0,0.246346371159628,0,0.176512253383001,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0.0787831823072236,0.247247575143499,0.337017719270924,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0.262272940674991,0.105600336519406,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,1.31348033198942,0,0.226624183040251,0.879313402068495,14.5757577803443,0,0,0,0,0,1.25763444079733,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0.249960815924213,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0.196300467230486,0,0,0,0,0.485710993059139,0.233939463462106,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.42265572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| ||
|short_description=p7@UROD | |||
}} | }} |
Latest revision as of 07:17, 18 September 2015
Short description: | p7@UROD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_UROD_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000428106, ENST00000496439_5end |
EntrezGene: | UROD |
HGNC: | 12591 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.13e-19 | 2 |
erythroblast | 3.13e-19 | 2 |
megakaryocyte-erythroid progenitor cell | 3.13e-19 | 2 |
erythroid progenitor cell | 3.13e-19 | 2 |
reticulocyte | 3.13e-19 | 2 |
proerythroblast | 3.13e-19 | 2 |
basophilic erythroblast | 3.13e-19 | 2 |
polychromatophilic erythroblast | 3.13e-19 | 2 |
orthochromatic erythroblast | 3.13e-19 | 2 |
myeloid cell | 2.19e-13 | 108 |
common myeloid progenitor | 2.19e-13 | 108 |
uterine smooth muscle cell | 1.07e-09 | 1 |
hematopoietic oligopotent progenitor cell | 3.25e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.25e-08 | 161 |
hematopoietic stem cell | 8.97e-08 | 168 |
hematopoietic cell | 2.94e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.44e-39 | 8 |
myeloid leukemia | 2.29e-32 | 31 |
leukemia | 2.22e-25 | 39 |
hematologic cancer | 5.30e-19 | 51 |
immune system cancer | 5.30e-19 | 51 |
chronic myeloid leukemia | 4.06e-10 | 1 |
acute myeloid leukemia | 6.91e-10 | 1 |