FFCP PHASE1:Hg19::chr19:42364460..42364541,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6223 | |EntrezGene=6223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10402 | |HGNC=10402 | ||
|TSSclassifier=strong | |||
|UniProt=P39019 | |UniProt=P39019 | ||
|association_with_transcript=-303bp_to_AB528300,BC007615,DQ891823,EU176636_5end | |association_with_transcript=-303bp_to_AB528300,BC007615,DQ891823,EU176636_5end | ||
|cluster_id=chr19:42364460..42364541,+ | |||
|description=CAGE_peak_3_at_RPS19_5end | |description=CAGE_peak_3_at_RPS19_5end | ||
|id=chr19:42364460..42364541,+ | |id=chr19:42364460..42364541,+ | ||
|ontology_enrichment_celltype=CL:0000012!1.93e-31!682;CL:0000548!2.72e-31!679;CL:0000004!2.72e-31!679;CL:0000255!2.72e-31!679;CL:0000144!5.85e-29!625;CL:0002371!2.17e-28!591;CL:0000003!4.25e-25!722;CL:0000220!4.94e-24!246;CL:0002321!1.13e-23!248;CL:0000222!1.35e-21!119;CL:0000680!3.79e-16!57;CL:0000056!3.79e-16!57;CL:0000355!3.79e-16!57;CL:0000183!7.08e-16!59;CL:0000192!9.98e-16!42;CL:0000514!9.98e-16!42;CL:0000187!3.75e-15!54;CL:0000393!8.24e-14!60;CL:0000211!8.24e-14!60;CL:0000359!9.33e-14!32;CL:0000055!8.82e-13!180;CL:0000063!2.02e-10!578;CL:0000066!5.58e-10!254;CL:0000071!3.41e-07!18;CL:0002546!3.41e-07!18;CL:0000076!6.17e-07!62 | |ontology_enrichment_celltype=CL:0000012!1.93e-31!682;CL:0000548!2.72e-31!679;CL:0000004!2.72e-31!679;CL:0000255!2.72e-31!679;CL:0000144!5.85e-29!625;CL:0002371!2.17e-28!591;CL:0000003!4.25e-25!722;CL:0000220!4.94e-24!246;CL:0002321!1.13e-23!248;CL:0000222!1.35e-21!119;CL:0000680!3.79e-16!57;CL:0000056!3.79e-16!57;CL:0000355!3.79e-16!57;CL:0000183!7.08e-16!59;CL:0000192!9.98e-16!42;CL:0000514!9.98e-16!42;CL:0000187!3.75e-15!54;CL:0000393!8.24e-14!60;CL:0000211!8.24e-14!60;CL:0000359!9.33e-14!32;CL:0000055!8.82e-13!180;CL:0000063!2.02e-10!578;CL:0000066!5.58e-10!254;CL:0000071!3.41e-07!18;CL:0002546!3.41e-07!18;CL:0000076!6.17e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.46e-13;32!CL:0000192;1.56e-11;43!CL:0000187;7.79e-09;55!CL:0000071;1.81e-07;18!CL:0000393;4.43e-07;61!CL:0000211;4.43e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.14e-23,250;CL:0000222,1.64e-22,121;CL:0000680,2.36e-16,58;CL:0000056,2.36e-16,58;CL:0000355,2.36e-16,58;CL:0000192,4.32e-16,43;CL:0000514,4.32e-16,43;CL:0000187,2.55e-15,55;CL:0000359,6.23e-14,32;CL:0000393,6.66e-14,61;CL:0000211,6.66e-14,61;CL:0000066,1.03e-09,253;CL:0000071,1.95e-07,18;CL:0002546,1.95e-07,18;CL:0000076,2.92e-07,63;CL:0000213,5.80e-07,58;CL:0000215,5.80e-07,58;CL:0002078,6.66e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;1.56e-11;43!CL:0000355;8.77e-09;58!CL:0002546;1.81e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!9.78e-19!82;UBERON:0004872!1.88e-17!84;UBERON:0001981!2.30e-16!60;UBERON:0007500!2.30e-16!60;UBERON:0004537!2.30e-16!60;UBERON:0006965!2.30e-16!60;UBERON:0004290!4.27e-16!70;UBERON:0000914!1.57e-15!83;UBERON:0002329!1.57e-15!83;UBERON:0003077!1.57e-15!83;UBERON:0003059!1.57e-15!83;UBERON:0007282!1.57e-15!83;UBERON:0009618!1.57e-15!83;UBERON:0007285!1.57e-15!83;UBERON:0000055!1.62e-15!69;UBERON:0001637!1.07e-14!42;UBERON:0003509!1.07e-14!42;UBERON:0004572!1.07e-14!42;UBERON:0002049!1.14e-14!79;UBERON:0007798!1.14e-14!79;UBERON:0001134!6.73e-14!61;UBERON:0002036!6.73e-14!61;UBERON:0003082!6.73e-14!61;UBERON:0003914!1.38e-12!118;UBERON:0002385!1.40e-12!63;UBERON:0001015!1.40e-12!63;UBERON:0000383!1.40e-12!63;UBERON:0002100!2.26e-12!216;UBERON:0005256!9.22e-12!143;UBERON:0000490!1.34e-11!138;UBERON:0004535!1.51e-11!110;UBERON:0004573!3.45e-11!33;UBERON:0004571!3.45e-11!33;UBERON:0001009!6.73e-11!113;UBERON:0003104!7.75e-10!238;UBERON:0009142!7.75e-10!238;UBERON:0006914!3.02e-07!25;UBERON:0001986!3.41e-07!18;UBERON:0004638!3.41e-07!18;UBERON:0004852!3.41e-07!18;UBERON:0000487!5.76e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.59e-10;42!UBERON:0003509;2.59e-10;42!UBERON:0004572;2.59e-10;42!UBERON:0004573;5.30e-10;33!UBERON:0004571;5.30e-10;33!UBERON:0007500;5.63e-10;56!UBERON:0001981;5.63e-10;56!UBERON:0004537;5.63e-10;56!UBERON:0003914;1.44e-08;74!UBERON:0004638;1.81e-07;18!UBERON:0001986;1.81e-07;18!UBERON:0004852;1.81e-07;18!UBERON:0006914;3.27e-07;25!UBERON:0000487;6.59e-07;22!UBERON:0000490;8.35e-07;33 | |||
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| ||
|short_description=p3@RPS19 | |short_description=p3@RPS19 | ||
}} | }} |
Latest revision as of 06:49, 18 September 2015
Short description: | p3@RPS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPS19_5end |
Coexpression cluster: | NA |
Association with transcript: | -303bp_to_AB528300, BC007615, DQ891823, EU176636_5end |
EntrezGene: | RPS19 |
HGNC: | 10402 |
UniProt: | P39019 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.14e-23 | 250 |
mesodermal cell | 1.64e-22 | 121 |
muscle precursor cell | 2.36e-16 | 58 |
myoblast | 2.36e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.36e-16 | 58 |
smooth muscle cell | 4.32e-16 | 43 |
smooth muscle myoblast | 4.32e-16 | 43 |
muscle cell | 2.55e-15 | 55 |
vascular associated smooth muscle cell | 6.23e-14 | 32 |
electrically responsive cell | 6.66e-14 | 61 |
electrically active cell | 6.66e-14 | 61 |
epithelial cell | 1.03e-09 | 253 |
blood vessel endothelial cell | 1.95e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.95e-07 | 18 |
squamous epithelial cell | 2.92e-07 | 63 |
lining cell | 5.80e-07 | 58 |
barrier cell | 5.80e-07 | 58 |
meso-epithelial cell | 6.66e-07 | 45 |