FFCP PHASE1:Hg19::chr6:33265493..33265505,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:33265493..33265505,-
|short_description=p17@RGL2
|description=CAGE_peak_17_at_RGL2_5end
|association_with_transcript=-24bp_to_ENST00000485077_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5863 | |EntrezGene=5863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9769 | |HGNC=9769 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000485077_5end | |||
|cluster_id=chr6:33265493..33265505,- | |||
|description=CAGE_peak_17_at_RGL2_5end | |||
|id=chr6:33265493..33265505,- | |||
|ontology_enrichment_celltype=CL:0002076!1.38e-19!43;CL:0000223!1.17e-17!59;CL:0000066!5.32e-17!254;CL:0002368!9.28e-13!13;CL:0002202!2.39e-09!9;CL:0002632!2.39e-09!9;CL:0002251!8.48e-08!21;CL:0000039!3.60e-07!7;CL:0000586!3.60e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.48e-14;19!CL:0002537;3.81e-11;5!CL:0002577;7.77e-09;3!CL:0000039;5.56e-08;7!CL:0000586;5.56e-08;7!CL:0000313;4.01e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.82e-14,19;CL:0002537,3.95e-11,5;CL:0002577,8.73e-09,3;CL:0000039,4.82e-08,7;CL:0000586,4.82e-08,7;CL:0000313,4.51e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.09e-12;2!UBERON:0003124;2.22e-07;1!UBERON:0000358;4.01e-07;1!UBERON:0008425;4.01e-07;1!UBERON:0009143;9.77e-07;1!UBERON:0008801;9.77e-07;1!UBERON:0005754;9.77e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.62e-17!106;DOID:0050687!2.53e-14!143;DOID:299!1.27e-10!25;DOID:5093!4.18e-07!4;DOID:1612!4.18e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.77e-13;4!DOID:1612;1.77e-13;4!DOID:0050619;2.58e-07;1!DOID:1357;2.58e-07;1!DOID:2152;4.01e-07;1!DOID:1799;9.77e-07;1!DOID:10165;9.77e-07;1!DOID:1798;9.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.21e-13,4;DOID:1612,1.21e-13,4;DOID:0050619,2.50e-07,1;DOID:1357,2.50e-07,1;DOID:2152,4.51e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.74e-18!169;UBERON:0000925!1.74e-18!169;UBERON:0006595!1.74e-18!169;UBERON:0000077!3.51e-14!130;UBERON:0005631!7.59e-14!14;UBERON:0000158!7.59e-14!14;UBERON:0001007!2.06e-13!155;UBERON:0001555!2.06e-13!155;UBERON:0007026!2.06e-13!155;UBERON:0001004!1.61e-12!72;UBERON:0004921!2.14e-11!129;UBERON:0004185!2.14e-11!129;UBERON:0005911!2.29e-11!82;UBERON:0000161!1.34e-10!35;UBERON:0003124!3.36e-10!7;UBERON:0000466!6.68e-10!126;UBERON:0000478!3.49e-09!24;UBERON:0005153!7.92e-09!37;UBERON:0000464!1.12e-08!104;UBERON:0005178!2.42e-08!34;UBERON:0002224!2.42e-08!34;UBERON:0001041!4.02e-08!98;UBERON:0005181!5.76e-08!35;UBERON:0000065!1.04e-07!53;UBERON:0002048!2.89e-07!22;UBERON:0000117!2.89e-07!22;UBERON:0000171!2.89e-07!22;UBERON:0000170!2.89e-07!22;UBERON:0005597!2.89e-07!22;UBERON:0000118!2.89e-07!22;UBERON:0000915!4.23e-07!52;UBERON:0005177!6.01e-07!107;UBERON:0004175!6.32e-07!25;UBERON:0001987!6.78e-07!4;UBERON:0004340!6.78e-07!4;UBERON:0007196!7.36e-07!14;UBERON:0001558!7.36e-07!14;UBERON:0005156!9.15e-07!59;UBERON:0000990!9.15e-07!59;UBERON:0000166!9.30e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.26e-18;24!UBERON:0006947;7.45e-17;3!UBERON:0004054;7.45e-17;3!UBERON:0005631;3.10e-14;10!UBERON:0000158;3.10e-14;10!UBERON:0001987;5.34e-14;4!UBERON:0000305;2.32e-13;7!UBERON:0005904;8.81e-13;4!UBERON:0000058;7.43e-09;10!UBERON:0001764;2.58e-07;1!UBERON:0001825;2.58e-07;1!UBERON:0004911;4.01e-07;1!UBERON:0001000;9.77e-07;1!UBERON:0001831;9.77e-07;1!UBERON:0000998;9.77e-07;1!UBERON:0001301;9.77e-07;1!UBERON:0006868;9.77e-07;1!UBERON:0005352;9.77e-07;1!UBERON:0001567;9.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.35e-25,14;UBERON:0000158,2.35e-25,14;UBERON:0000478,4.50e-18,24;UBERON:0006947,3.74e-17,3;UBERON:0004054,3.74e-17,3;UBERON:0001987,6.36e-14,4;UBERON:0004340,6.36e-14,4;UBERON:0003124,1.17e-13,7;UBERON:0000305,2.36e-13,7;UBERON:0005904,5.27e-13,4;UBERON:0004871,1.07e-11,8;UBERON:0004175,2.68e-10,25;UBERON:0001764,2.50e-07,1;UBERON:0001825,2.50e-07,1;UBERON:0004911,4.51e-07,1;UBERON:0000058,4.95e-07,19;UBERON:0001301,6.38e-07,1;UBERON:0001000,6.76e-07,1;UBERON:0005352,6.76e-07,1 | |||
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| ||
|short_description=p17@RGL2 | |||
}} | }} |
Latest revision as of 06:35, 18 September 2015
Short description: | p17@RGL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RGL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000485077_5end |
EntrezGene: | RGL2 |
HGNC: | 9769 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.82e-14 | 19 |
amnion mesenchymal stem cell | 3.95e-11 | 5 |
placental epithelial cell | 8.73e-09 | 3 |
germ line cell | 4.82e-08 | 7 |
germ cell | 4.82e-08 | 7 |
serous secreting cell | 4.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.35e-25 | 14 |
membranous layer | 2.35e-25 | 14 |
extraembryonic structure | 4.50e-18 | 24 |
male genital duct | 3.74e-17 | 3 |
internal male genitalia | 3.74e-17 | 3 |
placenta | 6.36e-14 | 4 |
allantois | 6.36e-14 | 4 |
chorion | 1.17e-13 | 7 |
amnion | 2.36e-13 | 7 |
duct of male reproductive system | 5.27e-13 | 4 |
somatic layer of lateral plate mesoderm | 1.07e-11 | 8 |
internal genitalia | 2.68e-10 | 25 |
maxillary sinus | 2.50e-07 | 1 |
paranasal sinus | 2.50e-07 | 1 |
epithelium of female gonad | 4.51e-07 | 1 |
duct | 4.95e-07 | 19 |
epididymis | 6.38e-07 | 1 |
vas deferens | 6.76e-07 | 1 |
spermatic cord | 6.76e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.21e-13 | 4 |
breast cancer | 1.21e-13 | 4 |
paranasal sinus cancer | 2.50e-07 | 1 |
maxillary sinus cancer | 2.50e-07 | 1 |
ovary epithelial cancer | 4.51e-07 | 1 |