FFCP PHASE1:Hg19::chr4:667686..667705,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7586 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-24bp_to_ENST00000505477_5end | |||
|cluster_id=chr4:667686..667705,+ | |||
|description=CAGE_peak_4_at_MYL5_5end | |||
|id=chr4:667686..667705,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.85e-23!679;CL:0000004!1.85e-23!679;CL:0000255!1.85e-23!679;CL:0000012!2.44e-22!682;CL:0000144!4.79e-22!625;CL:0000222!1.30e-21!119;CL:0002371!1.44e-19!591;CL:0000220!2.33e-18!246;CL:0002321!7.33e-18!248;CL:0000192!9.21e-17!42;CL:0000514!9.21e-17!42;CL:0000680!1.90e-16!57;CL:0000056!1.90e-16!57;CL:0000355!1.90e-16!57;CL:0000183!2.28e-16!59;CL:0000187!2.34e-15!54;CL:0000359!8.04e-14!32;CL:0000003!5.01e-13!722;CL:0000393!3.01e-12!60;CL:0000211!3.01e-12!60;CL:0000055!8.33e-11!180;CL:0000066!1.48e-09!254;CL:0000063!5.65e-09!578;CL:0002139!2.89e-08!24;CL:0000115!1.86e-07!35;CL:0000213!3.72e-07!57;CL:0000215!3.72e-07!57;CL:0000071!5.38e-07!18;CL:0002546!5.38e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.18e-16;32!CL:0000192;2.79e-15;43!CL:0000187;8.23e-11;55!CL:0002139;2.06e-09;24!CL:0000071;3.58e-08;18!CL:0000393;8.57e-08;61!CL:0000211;8.57e-08;61!CL:0000115;1.32e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.57e-24,121;CL:0000192,3.01e-22,43;CL:0000514,3.01e-22,43;CL:0000680,3.67e-20,58;CL:0000056,3.67e-20,58;CL:0000355,3.67e-20,58;CL:0000187,1.38e-18,55;CL:0000359,3.43e-18,32;CL:0002321,2.25e-17,250;CL:0000393,4.28e-16,61;CL:0000211,4.28e-16,61;CL:0002139,1.34e-09,24;CL:0000115,8.50e-09,36;CL:0000071,1.68e-08,18;CL:0002546,1.68e-08,18;CL:0000723,1.63e-07,433;CL:0000048,1.83e-07,427;CL:0002078,5.31e-07,45;CL:0000034,9.47e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;2.79e-15;43!CL:0000355;4.09e-11;58!CL:0002546;3.58e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.09e-18!79;UBERON:0007798!1.09e-18!79;UBERON:0001637!6.76e-18!42;UBERON:0003509!6.76e-18!42;UBERON:0004572!6.76e-18!42;UBERON:0000055!8.31e-18!69;UBERON:0004872!1.53e-16!84;UBERON:0001981!3.72e-16!60;UBERON:0007500!3.72e-16!60;UBERON:0004537!3.72e-16!60;UBERON:0006965!3.72e-16!60;UBERON:0003914!1.98e-15!118;UBERON:0004290!2.98e-15!70;UBERON:0000914!1.25e-14!83;UBERON:0002329!1.25e-14!83;UBERON:0003077!1.25e-14!83;UBERON:0003059!1.25e-14!83;UBERON:0007282!1.25e-14!83;UBERON:0009618!1.25e-14!83;UBERON:0007285!1.25e-14!83;UBERON:0000926!6.28e-14!448;UBERON:0004120!6.28e-14!448;UBERON:0006603!6.28e-14!448;UBERON:0000486!1.91e-13!82;UBERON:0004535!1.98e-13!110;UBERON:0001134!3.00e-13!61;UBERON:0002036!3.00e-13!61;UBERON:0003082!3.00e-13!61;UBERON:0004573!3.12e-13!33;UBERON:0004571!3.12e-13!33;UBERON:0002385!5.17e-13!63;UBERON:0001015!5.17e-13!63;UBERON:0000383!5.17e-13!63;UBERON:0001009!1.53e-12!113;UBERON:0005256!2.28e-12!143;UBERON:0000490!3.34e-12!138;UBERON:0002100!1.27e-11!216;UBERON:0003104!6.03e-10!238;UBERON:0009142!6.03e-10!238;UBERON:0000468!3.79e-09!659;UBERON:0000480!6.08e-09!626;UBERON:0000467!9.25e-09!625;UBERON:0000119!2.52e-08!312;UBERON:0000923!5.12e-08!604;UBERON:0005291!5.12e-08!604;UBERON:0006598!5.12e-08!604;UBERON:0002532!5.12e-08!604;UBERON:0000483!5.41e-08!309;UBERON:0000947!8.05e-08!21;UBERON:0010191!8.05e-08!21;UBERON:0002050!8.33e-08!605;UBERON:0005423!8.33e-08!605;UBERON:0000922!3.05e-07!612;UBERON:0003081!4.29e-07!216;UBERON:0000481!5.17e-07!347;UBERON:0001986!5.38e-07!18;UBERON:0004638!5.38e-07!18;UBERON:0004852!5.38e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.50e-15;42!UBERON:0003509;8.50e-15;42!UBERON:0004572;8.50e-15;42!UBERON:0007500;2.09e-13;56!UBERON:0001981;2.09e-13;56!UBERON:0004537;2.09e-13;56!UBERON:0004573;3.51e-13;33!UBERON:0004571;3.51e-13;33!UBERON:0000055;2.38e-11;65!UBERON:0002049;4.69e-10;75!UBERON:0007798;4.69e-10;75!UBERON:0003914;1.15e-09;74!UBERON:0004638;3.58e-08;18!UBERON:0001986;3.58e-08;18!UBERON:0004852;3.58e-08;18!UBERON:0000947;5.32e-08;21!UBERON:0010191;5.32e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.02e-22,42;UBERON:0003509,4.02e-22,42;UBERON:0004572,4.02e-22,42;UBERON:0000055,4.19e-21,68;UBERON:0004872,7.96e-21,83;UBERON:0007500,9.90e-21,59;UBERON:0001981,9.90e-21,59;UBERON:0004537,9.90e-21,59;UBERON:0006965,9.90e-21,59;UBERON:0002049,1.97e-20,78;UBERON:0007798,1.97e-20,78;UBERON:0007503,2.63e-20,78;UBERON:0000490,1.14e-19,148;UBERON:0002329,2.33e-19,71;UBERON:0003059,2.33e-19,71;UBERON:0007282,2.33e-19,71;UBERON:0004290,2.33e-19,71;UBERON:0009618,2.33e-19,71;UBERON:0003077,7.82e-19,72;UBERON:0007285,7.82e-19,72;UBERON:0003914,1.87e-18,117;UBERON:0007524,2.52e-18,73;UBERON:0001134,8.74e-18,62;UBERON:0002036,8.74e-18,62;UBERON:0003082,8.74e-18,62;UBERON:0000486,7.77e-17,83;UBERON:0002385,1.01e-16,64;UBERON:0001015,1.01e-16,64;UBERON:0000383,1.01e-16,64;UBERON:0004535,2.70e-16,109;UBERON:0004573,2.24e-15,33;UBERON:0004571,2.24e-15,33;UBERON:0001009,2.74e-15,112;UBERON:0005256,6.78e-14,122;UBERON:0000926,1.74e-13,315;UBERON:0004120,1.74e-13,315;UBERON:0006603,1.74e-13,315;UBERON:0003104,1.56e-11,160;UBERON:0009142,1.56e-11,160;UBERON:0000119,9.09e-11,309;UBERON:0000483,1.65e-10,306;UBERON:0002100,1.68e-10,199;UBERON:0004638,1.68e-08,18;UBERON:0001986,1.68e-08,18;UBERON:0004852,1.68e-08,18;UBERON:0000947,1.75e-08,21;UBERON:0010191,1.75e-08,21;UBERON:0002050,4.55e-07,564;UBERON:0005423,5.68e-07,581;UBERON:0003081,5.72e-07,203;UBERON:0000487,6.55e-07,22 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.986680828671798,2.00146596706261,0,1.74467704820074,5.06599756336621,1.26343974685366,1.30592814099919,1.22866968250754,2.79120467188971,0.655324116390517,1.58260186937072,0.247532705920093,0.662794751455832,2.6893005858071,0.602694528023977,0.730310090387373,1.95173119516203,0.61560529038394,1.42800483870977,0.313454721478088,0,0.547497700291537,0.376627918784408,0.0764134057479513,0.328402357799783,0.0787107813136792,0,0.383829398097213,0.309632246632152,0.919421224478927,0.6024118375565,1.84877005083394,0,0.284338464974843,0.293600439334847,0,0.200544447470142,0,1.11957737119962,0.32389366601898,1.28787783817093,0.145398238779565,0,0.485168122375632,0.232429036905685,1.6446715520873,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.545812300115692,0.674170453335254,0.306083892370903,0.962787081228281,0.639337125799041,1.31940520074686,0.199463657621632,0.852449501065388,0.290209238628584,1.70215567407342,0.622822248995575,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0.422510572623884,0.425208599930087,0.838634582033504,0.336985893439485,1.05123824989054,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,1.40648818027883,0,0,0.869079113764942,0.795285947051099,0,0.0945348171640679,0.886917589850256,0.702678285545008,0.196468613246569,2.18577172975525,2.22470665670658,0.97364218096405,0.522389211897802,0.664789802594326,0,0,0,0.993812036833525,2.58070378531837,2.42998351125316,2.26123176769604,2.51699661725944,2.20094433552054,2.50793959844173,2.32575083252396,2.13459757612026,0.33472061276467,2.81980521976403,1.52054421143703,1.95249646038536,2.94130464276695,1.62028389576352,1.07159673940896,1.12264686313085,1.57656072676651,0,0.949265659568129,2.74802615895611,0,0,2.61656431285521,0,1.51956613997496,2.51577443545116,0.573673241497627,1.06400514659507,1.12135520028461,3.20246987189115,5.92002116201184,0.311211035399766,1.34710672069688,1.30769522490767,1.36221684880438,0.576175924479999,1.40592859100278,1.5608003841516,2.85235910772225,1.04614076386261,0.587172493218824,0.809364721840658,0.561803226808994,0.61246251376468,1.10550885580591,0.309977343527296,0,0,0.910161361938026,0.718618141816238,0.336672227908132,0.375355559615893,0.831192346452549,0.438977620880838,1.5324389789951,0.45071417671979,1.92834711372036,0.89694817844431,0.640672166455702,0.211931901159562,0.600182192168805,0.309157587715317,0.257640540045629,0.744467425326359,1.35021065793013,1.36411807225678,1.26216887122057,0.368199594569197,0.161646056818812,1.06502877754984,0.906768884048762,0.508681776931463,1.93260853163297,0.545492241181669,2.58124135850103,0.365921118388786,0,0.116193942869518,0.414644220061482,0.252320850875628,0,3.12899064659632,1.92972281457866,1.38134921352481,1.39310378409594,1.44375896333917,1.0647612003586,1.34867752062481,1.68707720918437,1.43382164552112,1.52515610864684,1.89816495288877,1.07865046528132,3.13954344200554,1.92373578473195,1.4763109092493,0,2.057870056657,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0,2.23038153388083,1.20725313949488,2.24803506515239,0.301586917234893,0.0925884451585296,1.3032332212413,4.15973914111831,2.88662684050547,0.115930404975077,1.40890433082986,1.29929802984966,3.24089858803628,0.761016608938393,0.790204397959275,0,0.738651018262192,1.17002132569619,1.33768046059855,3.74935335947108,1.84780341018745,1.27597587518148,0.806026704325635,0.871901815541886,1.15014803749563,0,0.264145302039678,0,0,0.25248486685276,0.63497894292169,0.763976851116555,0,1.71072446022705,1.02827492703324,1.50171528921959,0.857479297891735,1.00917975910825,1.30788020649984,0.7333828582095,1.03417372606222,3.57656445851882,2.535908257668,0.26593811658487,3.12022310734098,1.28603687131071,1.41849132023278,2.1313774321288,1.14382394926518,0.542621605391443,1.64648067356154,1.62868092146868,0.355391948742546,1.58390374586686,0.904318131178758,1.74306691720059,1.79951384127703,2.43247561282381,1.00451418286425,0,3.35474797688216,1.14861935834114,0,1.73737568001095,1.43833425785268,1.61154866915906,0,0,0.215627574859517,0,0,0,0,0,1.27587750330633,0,0,0,0.12269149171914,1.00034104211935,1.08506009479894,0.415941723061614,0.713715955188647,1.26161932027148,0.117141414992713,1.20378439891088,0,2.0694614258501,0.664225598535437,1.10621501125022,0.521301686808497,0.587403472388222,2.40200396667599,0,0.215714200818617,0,1.5156378572313,4.99306318531491,2.11673205330776,0.992431231275107,0.61384789315225,1.40330047216537,1.40953064181271,1.02341449813341,2.2519548960105,0,1.54209693802656,0.710246901252508,1.23190734020714,1.03850885836724,1.39452454151951,0.120859449591622,2.00506470303285,0.920809889358963,1.60740227430449,2.91345868810747,2.097990639350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| |||
|short_description=p4@MYL5 | |||
}} |
Latest revision as of 06:20, 18 September 2015
Short description: | p4@MYL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYL5_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000505477_5end |
EntrezGene: | MYL5 |
HGNC: | 7586 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.57e-24 | 121 |
smooth muscle cell | 3.01e-22 | 43 |
smooth muscle myoblast | 3.01e-22 | 43 |
muscle precursor cell | 3.67e-20 | 58 |
myoblast | 3.67e-20 | 58 |
multi-potent skeletal muscle stem cell | 3.67e-20 | 58 |
muscle cell | 1.38e-18 | 55 |
vascular associated smooth muscle cell | 3.43e-18 | 32 |
embryonic cell | 2.25e-17 | 250 |
electrically responsive cell | 4.28e-16 | 61 |
electrically active cell | 4.28e-16 | 61 |
endothelial cell of vascular tree | 1.34e-09 | 24 |
endothelial cell | 8.50e-09 | 36 |
blood vessel endothelial cell | 1.68e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.68e-08 | 18 |
somatic stem cell | 1.63e-07 | 433 |
multi fate stem cell | 1.83e-07 | 427 |
meso-epithelial cell | 5.31e-07 | 45 |
stem cell | 9.47e-07 | 441 |