FFCP PHASE1:Hg19::chr13:96329428..96329439,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:96329428..96329439,+
|short_description=p3@DNAJC3
|description=CAGE_peak_3_at_DNAJC3_5end
|association_with_transcript=17bp_to_ENST00000376795_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5611 | |EntrezGene=5611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9439 | |HGNC=9439 | ||
|TSSclassifier=strong | |||
|UniProt=Q13217 | |UniProt=Q13217 | ||
|association_with_transcript=17bp_to_ENST00000376795_5end | |||
|cluster_id=chr13:96329428..96329439,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_DNAJC3_5end | |||
|id=chr13:96329428..96329439,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.74e-16!76;CL:0002057!1.09e-15!42;CL:0000738!1.90e-14!140;CL:0000860!2.61e-14!45;CL:0000557!4.92e-14!71;CL:0002009!5.89e-14!65;CL:0002194!5.75e-13!63;CL:0000576!5.75e-13!63;CL:0000040!5.75e-13!63;CL:0000559!5.75e-13!63;CL:0000037!1.17e-11!172;CL:0000566!1.17e-11!172;CL:0000839!1.71e-11!70;CL:0000763!2.95e-11!112;CL:0000049!2.95e-11!112;CL:0000988!1.21e-10!182;CL:0002087!1.74e-10!119;CL:0002032!4.43e-10!165;CL:0000837!4.43e-10!165;CL:0002031!1.01e-09!124;CL:0000134!2.14e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.68e-16;33!CL:0002057;8.68e-16;33!CL:0000473;1.63e-12;39!CL:0000234;1.63e-12;39!CL:0000576;9.86e-11;48!CL:0000766;5.72e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.21e-17,72;CL:0000860,7.33e-16,42;CL:0002057,7.33e-16,42;CL:0000473,2.28e-15,48;CL:0000234,2.28e-15,48;CL:0002009,6.27e-15,61;CL:0000557,8.24e-15,67;CL:0000738,9.23e-15,136;CL:0002194,6.85e-14,59;CL:0000576,6.85e-14,59;CL:0000040,6.85e-14,59;CL:0000559,6.85e-14,59;CL:0000839,4.02e-12,66;CL:0000037,8.16e-12,168;CL:0000763,1.29e-11,108;CL:0000049,1.29e-11,108;CL:0000988,3.21e-11,177;CL:0002087,8.40e-11,115;CL:0002032,3.32e-10,161;CL:0000837,3.32e-10,161;CL:0002031,6.35e-10,120;CL:0000134,5.72e-08,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.88e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.65e-12!102;UBERON:0003061!3.65e-12!102;UBERON:0002193!8.54e-11!112;UBERON:0002371!1.66e-10!80;UBERON:0001474!7.66e-10!86;UBERON:0002405!3.37e-09!115;UBERON:0004765!5.11e-08!101;UBERON:0001434!5.11e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.52e-13,98;UBERON:0003061,5.52e-13,98;UBERON:0002193,1.09e-11,108;UBERON:0002371,2.93e-11,76;UBERON:0001474,1.51e-10,82;UBERON:0002405,1.49e-09,93;UBERON:0004765,1.65e-09,90;UBERON:0001434,3.63e-07,100 | |||
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| ||
|short_description=p3@DNAJC3 | |||
}} | }} |
Latest revision as of 06:19, 18 September 2015
Short description: | p3@DNAJC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DNAJC3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 17bp_to_ENST00000376795_5end |
EntrezGene: | DNAJC3 |
HGNC: | 9439 |
UniProt: | Q13217 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.21e-17 | 72 |
classical monocyte | 7.33e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.33e-16 | 42 |
defensive cell | 2.28e-15 | 48 |
phagocyte | 2.28e-15 | 48 |
macrophage dendritic cell progenitor | 6.27e-15 | 61 |
granulocyte monocyte progenitor cell | 8.24e-15 | 67 |
leukocyte | 9.23e-15 | 136 |
monopoietic cell | 6.85e-14 | 59 |
monocyte | 6.85e-14 | 59 |
monoblast | 6.85e-14 | 59 |
promonocyte | 6.85e-14 | 59 |
myeloid lineage restricted progenitor cell | 4.02e-12 | 66 |
hematopoietic stem cell | 8.16e-12 | 168 |
myeloid cell | 1.29e-11 | 108 |
common myeloid progenitor | 1.29e-11 | 108 |
hematopoietic cell | 3.21e-11 | 177 |
nongranular leukocyte | 8.40e-11 | 115 |
hematopoietic oligopotent progenitor cell | 3.32e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.32e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 6.35e-10 | 120 |
mesenchymal cell | 5.72e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.52e-13 | 98 |
blood island | 5.52e-13 | 98 |
hemolymphoid system | 1.09e-11 | 108 |
bone marrow | 2.93e-11 | 76 |
bone element | 1.51e-10 | 82 |
immune system | 1.49e-09 | 93 |
skeletal element | 1.65e-09 | 90 |
skeletal system | 3.63e-07 | 100 |