FFCP PHASE1:Hg19::chr10:43892668..43892762,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3185 | |EntrezGene=3185 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5039 | |HGNC=5039 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477108_5end | |association_with_transcript=0bp_to_ENST00000477108_5end | ||
|cluster_id=chr10:43892668..43892762,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_HNRNPF_5end | |description=CAGE_peak_3_at_HNRNPF_5end | ||
|id=chr10:43892668..43892762,- | |id=chr10:43892668..43892762,- | ||
|ontology_enrichment_celltype=CL:0000037!1.52e-30!172;CL:0000566!1.52e-30!172;CL:0000988!8.19e-30!182;CL:0000738!1.73e-29!140;CL:0002032!3.16e-28!165;CL:0000837!3.16e-28!165;CL:0002031!5.12e-27!124;CL:0000766!8.22e-26!76;CL:0002087!1.32e-24!119;CL:0000763!1.80e-23!112;CL:0000049!1.80e-23!112;CL:0000557!2.63e-23!71;CL:0000839!1.17e-22!70;CL:0002009!5.13e-22!65;CL:0002194!6.17e-21!63;CL:0000576!6.17e-21!63;CL:0000040!6.17e-21!63;CL:0000559!6.17e-21!63;CL:0002057!8.38e-21!42;CL:0000860!8.31e-17!45;CL:0000945!2.08e-07!24;CL:0000826!2.08e-07!24 | |ontology_enrichment_celltype=CL:0000037!1.52e-30!172;CL:0000566!1.52e-30!172;CL:0000988!8.19e-30!182;CL:0000738!1.73e-29!140;CL:0002032!3.16e-28!165;CL:0000837!3.16e-28!165;CL:0002031!5.12e-27!124;CL:0000766!8.22e-26!76;CL:0002087!1.32e-24!119;CL:0000763!1.80e-23!112;CL:0000049!1.80e-23!112;CL:0000557!2.63e-23!71;CL:0000839!1.17e-22!70;CL:0002009!5.13e-22!65;CL:0002194!6.17e-21!63;CL:0000576!6.17e-21!63;CL:0000040!6.17e-21!63;CL:0000559!6.17e-21!63;CL:0002057!8.38e-21!42;CL:0000860!8.31e-17!45;CL:0000945!2.08e-07!24;CL:0000826!2.08e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.12e-18;33!CL:0002057;3.12e-18;33!CL:0000473;2.68e-16;39!CL:0000234;2.68e-16;39!CL:0000576;5.82e-15;48!CL:0000766;5.74e-13;69!CL:0002087;5.07e-09;104!CL:0000763;6.48e-09;100!CL:0000738;2.41e-08;136!CL:0000945;2.36e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.57e-34,168;CL:0000738,4.54e-33,136;CL:0000988,1.86e-32,177;CL:0002032,2.12e-31,161;CL:0000837,2.12e-31,161;CL:0002031,1.15e-30,120;CL:0000766,1.16e-30,72;CL:0002087,3.89e-28,115;CL:0000557,4.67e-28,67;CL:0000839,2.28e-27,66;CL:0000763,4.93e-27,108;CL:0000049,4.93e-27,108;CL:0002009,7.09e-27,61;CL:0002194,9.71e-26,59;CL:0000576,9.71e-26,59;CL:0000040,9.71e-26,59;CL:0000559,9.71e-26,59;CL:0000473,2.47e-22,48;CL:0000234,2.47e-22,48;CL:0000860,8.37e-21,42;CL:0002057,8.37e-21,42;CL:0000945,2.08e-07,24;CL:0000826,2.08e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-15;42!CL:0000049;1.77e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.25e-27!112;UBERON:0002390!3.05e-25!102;UBERON:0003061!3.05e-25!102;UBERON:0002371!3.60e-21!80;UBERON:0002405!1.27e-20!115;UBERON:0001474!6.36e-18!86;UBERON:0004765!3.73e-13!101;UBERON:0001434!3.73e-13!101;UBERON:0003081!1.17e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.72e-31,108;UBERON:0002390,3.45e-29,98;UBERON:0003061,3.45e-29,98;UBERON:0002405,1.14e-28,93;UBERON:0002371,2.70e-25,76;UBERON:0001474,1.83e-21,82;UBERON:0004765,5.00e-17,90;UBERON:0001434,1.33e-14,100;UBERON:0003081,5.26e-12,203 | |||
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| ||
|short_description=p3@HNRNPF | |short_description=p3@HNRNPF | ||
}} | }} |
Latest revision as of 06:17, 18 September 2015
Short description: | p3@HNRNPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HNRNPF_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000477108_5end |
EntrezGene: | HNRNPF |
HGNC: | 5039 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.57e-34 | 168 |
leukocyte | 4.54e-33 | 136 |
hematopoietic cell | 1.86e-32 | 177 |
hematopoietic oligopotent progenitor cell | 2.12e-31 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-31 | 161 |
hematopoietic lineage restricted progenitor cell | 1.15e-30 | 120 |
myeloid leukocyte | 1.16e-30 | 72 |
nongranular leukocyte | 3.89e-28 | 115 |
granulocyte monocyte progenitor cell | 4.67e-28 | 67 |
myeloid lineage restricted progenitor cell | 2.28e-27 | 66 |
myeloid cell | 4.93e-27 | 108 |
common myeloid progenitor | 4.93e-27 | 108 |
macrophage dendritic cell progenitor | 7.09e-27 | 61 |
monopoietic cell | 9.71e-26 | 59 |
monocyte | 9.71e-26 | 59 |
monoblast | 9.71e-26 | 59 |
promonocyte | 9.71e-26 | 59 |
defensive cell | 2.47e-22 | 48 |
phagocyte | 2.47e-22 | 48 |
classical monocyte | 8.37e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.37e-21 | 42 |
lymphocyte of B lineage | 2.08e-07 | 24 |
pro-B cell | 2.08e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.72e-31 | 108 |
hematopoietic system | 3.45e-29 | 98 |
blood island | 3.45e-29 | 98 |
immune system | 1.14e-28 | 93 |
bone marrow | 2.70e-25 | 76 |
bone element | 1.83e-21 | 82 |
skeletal element | 5.00e-17 | 90 |
skeletal system | 1.33e-14 | 100 |
lateral plate mesoderm | 5.26e-12 | 203 |