FFCP PHASE1:Hg19::chr4:66536221..66536236,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:66536221..66536236,-
|short_description=p4@EPHA5
|description=CAGE_peak_4_at_EPHA5_5end
|association_with_transcript=-8bp_to_ENST00000511294_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2044 | |EntrezGene=2044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3389 | |HGNC=3389 | ||
|TSSclassifier=strong | |||
|UniProt=F8VP57 | |UniProt=F8VP57 | ||
|association_with_transcript=-8bp_to_ENST00000511294_5end | |||
|cluster_id=chr4:66536221..66536236,- | |||
|coexpression_cluster_id=C1943 | |||
|description=CAGE_peak_4_at_EPHA5_5end | |||
|id=chr4:66536221..66536236,- | |||
|ontology_enrichment_celltype=CL:0000055!7.50e-11!180;CL:0000133!5.88e-07!59;CL:0000359!6.80e-07!32 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.34e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;2.03e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,2.24e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0001017!6.30e-37!82;UBERON:0005743!4.83e-36!86;UBERON:0001049!1.82e-35!57;UBERON:0005068!1.82e-35!57;UBERON:0006241!1.82e-35!57;UBERON:0007135!1.82e-35!57;UBERON:0000073!1.02e-34!94;UBERON:0001016!1.02e-34!94;UBERON:0003075!4.92e-34!86;UBERON:0007284!4.92e-34!86;UBERON:0002346!1.93e-32!90;UBERON:0000955!1.50e-31!69;UBERON:0006238!1.50e-31!69;UBERON:0002616!6.14e-31!59;UBERON:0002780!3.80e-28!41;UBERON:0001890!3.80e-28!41;UBERON:0006240!3.80e-28!41;UBERON:0003080!5.10e-27!42;UBERON:0002020!3.13e-24!34;UBERON:0003528!3.13e-24!34;UBERON:0001893!6.49e-24!34;UBERON:0001869!9.49e-24!32;UBERON:0003056!2.84e-23!61;UBERON:0002791!3.58e-23!33;UBERON:0004121!1.11e-22!169;UBERON:0000924!4.12e-22!173;UBERON:0006601!4.12e-22!173;UBERON:0000033!7.82e-22!123;UBERON:0000153!1.05e-20!129;UBERON:0007811!1.05e-20!129;UBERON:0000956!4.04e-20!25;UBERON:0000203!4.04e-20!25;UBERON:0002619!2.33e-19!22;UBERON:0000025!2.58e-19!194;UBERON:0007023!1.60e-18!115;UBERON:0001950!8.97e-18!20;UBERON:0000483!3.60e-17!309;UBERON:0000119!1.56e-16!312;UBERON:0004111!7.18e-16!241;UBERON:0000477!3.31e-15!286;UBERON:0000481!8.59e-14!347;UBERON:0000475!6.02e-12!365;UBERON:0000922!7.59e-10!612;UBERON:0002050!1.05e-09!605;UBERON:0005423!1.05e-09!605;UBERON:0000923!1.59e-09!604;UBERON:0005291!1.59e-09!604;UBERON:0006598!1.59e-09!604;UBERON:0002532!1.59e-09!604;UBERON:0003076!1.81e-09!15;UBERON:0003057!1.81e-09!15;UBERON:0000064!2.75e-08!219;UBERON:0001871!9.64e-08!7;UBERON:0004733!2.17e-07!12;UBERON:0002028!2.17e-07!12;UBERON:0007277!2.17e-07!12;UBERON:0000468!2.82e-07!659;UBERON:0000467!3.12e-07!625;UBERON:0000480!4.02e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.20e-28;22!UBERON:0001950;3.13e-26;20!UBERON:0000956;3.37e-26;25!UBERON:0000203;3.37e-26;25!UBERON:0001869;1.19e-25;32!UBERON:0003528;6.94e-25;34!UBERON:0002020;6.94e-25;34!UBERON:0002791;9.49e-24;32!UBERON:0001893;9.28e-23;34!UBERON:0002780;1.78e-21;41!UBERON:0001890;1.78e-21;41!UBERON:0000073;7.90e-20;53!UBERON:0002616;7.90e-20;53!UBERON:0000955;6.37e-16;68!UBERON:0001017;3.30e-15;75!UBERON:0001016;8.12e-13;83!UBERON:0001871;8.13e-10;6!UBERON:0000200;3.31e-08;6!UBERON:0002021;9.54e-08;5!UBERON:0000349;1.34e-07;5!UBERON:0004733;1.72e-07;12!UBERON:0002028;1.72e-07;12!UBERON:0001872;2.31e-07;5!UBERON:0002298;5.73e-07;6!UBERON:0004732;9.63e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.13e-43,81;UBERON:0001049,7.52e-41,56;UBERON:0005068,7.52e-41,56;UBERON:0006241,7.52e-41,56;UBERON:0007135,7.52e-41,56;UBERON:0001016,2.14e-39,89;UBERON:0000073,1.43e-37,53;UBERON:0002616,1.43e-37,53;UBERON:0003075,7.01e-37,82;UBERON:0007284,7.01e-37,82;UBERON:0000955,1.24e-36,68;UBERON:0006238,1.24e-36,68;UBERON:0002346,9.06e-36,86;UBERON:0002780,3.13e-31,41;UBERON:0001890,3.13e-31,41;UBERON:0003080,3.13e-31,41;UBERON:0006240,3.13e-31,41;UBERON:0010371,2.65e-29,104;UBERON:0001869,1.24e-28,32;UBERON:0002619,1.30e-28,22;UBERON:0003528,3.08e-28,34;UBERON:0002020,3.08e-28,34;UBERON:0003056,5.97e-27,61;UBERON:0002791,2.28e-26,32;UBERON:0001893,2.31e-26,34;UBERON:0000956,3.02e-26,25;UBERON:0000203,3.02e-26,25;UBERON:0001950,3.39e-26,20;UBERON:0010314,2.25e-25,132;UBERON:0004121,1.82e-22,171;UBERON:0000924,1.82e-22,171;UBERON:0006601,1.82e-22,171;UBERON:0000025,4.89e-16,192;UBERON:0000483,1.26e-12,306;UBERON:0000119,2.99e-12,309;UBERON:0007023,5.38e-12,114;UBERON:0011216,6.17e-12,223;UBERON:0003076,1.42e-10,15;UBERON:0003057,1.42e-10,15;UBERON:0004111,3.14e-10,240;UBERON:0001871,7.76e-10,6;UBERON:0000200,3.58e-08,6;UBERON:0002021,9.75e-08,5;UBERON:0004733,1.35e-07,12;UBERON:0002028,1.35e-07,12;UBERON:0007277,1.35e-07,12;UBERON:0000349,1.38e-07,5;UBERON:0001872,2.62e-07,5;UBERON:0002298,5.94e-07,6;UBERON:0004732,7.75e-07,13 | |||
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| ||
|short_description=p4@EPHA5 | |||
}} | }} |
Latest revision as of 06:10, 18 September 2015
Short description: | p4@EPHA5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EPHA5_5end |
Coexpression cluster: | C1943_extraskeletal_temporal_occipital_adrenal_parietal_duodenum_bone |
Association with transcript: | -8bp_to_ENST00000511294_5end |
EntrezGene: | EPHA5 |
HGNC: | 3389 |
UniProt: | F8VP57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sarcoma | 2.24e-07 | 20 |