FFCP PHASE1:Hg19::chr12:39300081..39300097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144402 | |EntrezGene=144402 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23498 | |HGNC=23498 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZB5 | |UniProt=F8VZB5 | ||
|association_with_transcript=-10bp_to_ENST00000550863_5end | |association_with_transcript=-10bp_to_ENST00000550863_5end | ||
|cluster_id=chr12:39300081..39300097,- | |||
|description=CAGE_peak_6_at_CPNE8_5end | |description=CAGE_peak_6_at_CPNE8_5end | ||
|id=chr12:39300081..39300097,- | |id=chr12:39300081..39300097,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.40e-11;13!CL:0000313;1.65e-10;1!CL:0002032;6.91e-10;1!CL:0000557;6.91e-10;1 | |ontology_enrichment_celltype_v019=CL:0000136;3.40e-11;13!CL:0000313;1.65e-10;1!CL:0002032;6.91e-10;1!CL:0000557;6.91e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.65e-10,1;CL:0000136,9.43e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.10e-10;1 | |ontology_enrichment_development_v019=UBERON:0005425;3.10e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.65e-10;1!DOID:3371;6.91e-10;1!DOID:4549;6.91e-10;1!DOID:5861;6.91e-10;1!DOID:6496;6.91e-10;1 | |ontology_enrichment_disease_v019=DOID:2152;1.65e-10;1!DOID:3371;6.91e-10;1!DOID:4549;6.91e-10;1!DOID:5861;6.91e-10;1!DOID:6496;6.91e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,1.65e-10,1;DOID:3371,6.33e-10,1;DOID:4549,6.33e-10,1;DOID:5861,6.33e-10,1;DOID:6496,6.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-31!115;UBERON:0001049!3.07e-20!57;UBERON:0005068!3.07e-20!57;UBERON:0006241!3.07e-20!57;UBERON:0007135!3.07e-20!57;UBERON:0003075!8.20e-19!86;UBERON:0007284!8.20e-19!86;UBERON:0002346!2.79e-17!90;UBERON:0002020!2.03e-16!34;UBERON:0003528!2.03e-16!34;UBERON:0002780!8.53e-16!41;UBERON:0001890!8.53e-16!41;UBERON:0006240!8.53e-16!41;UBERON:0000073!9.71e-16!94;UBERON:0001016!9.71e-16!94;UBERON:0002616!2.15e-15!59;UBERON:0003080!3.33e-15!42;UBERON:0001869!1.49e-14!32;UBERON:0001893!1.95e-14!34;UBERON:0005743!2.20e-14!86;UBERON:0001017!6.16e-14!82;UBERON:0002791!6.76e-14!33;UBERON:0000955!1.01e-12!69;UBERON:0006238!1.01e-12!69;UBERON:0003056!9.44e-12!61;UBERON:0002619!5.54e-11!22;UBERON:0001950!9.50e-11!20;UBERON:0000956!3.27e-10!25;UBERON:0000203!3.27e-10!25;UBERON:0004121!8.63e-10!169;UBERON:0000062!3.07e-09!511;UBERON:0000924!3.46e-09!173;UBERON:0006601!3.46e-09!173;UBERON:0000153!3.75e-09!129;UBERON:0007811!3.75e-09!129;UBERON:0000033!1.20e-08!123;UBERON:0000922!2.72e-08!612;UBERON:0002420!3.13e-08!9;UBERON:0007245!3.13e-08!9;UBERON:0010009!3.13e-08!9;UBERON:0010011!3.13e-08!9;UBERON:0000454!3.13e-08!9;UBERON:0002308!3.16e-08!9;UBERON:0000125!3.16e-08!9;UBERON:0000923!2.06e-07!604;UBERON:0005291!2.06e-07!604;UBERON:0006598!2.06e-07!604;UBERON:0002532!2.06e-07!604;UBERON:0002050!2.44e-07!605;UBERON:0005423!2.44e-07!605;UBERON:0002298!9.75e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!1.22e-31!115;UBERON:0001049!3.07e-20!57;UBERON:0005068!3.07e-20!57;UBERON:0006241!3.07e-20!57;UBERON:0007135!3.07e-20!57;UBERON:0003075!8.20e-19!86;UBERON:0007284!8.20e-19!86;UBERON:0002346!2.79e-17!90;UBERON:0002020!2.03e-16!34;UBERON:0003528!2.03e-16!34;UBERON:0002780!8.53e-16!41;UBERON:0001890!8.53e-16!41;UBERON:0006240!8.53e-16!41;UBERON:0000073!9.71e-16!94;UBERON:0001016!9.71e-16!94;UBERON:0002616!2.15e-15!59;UBERON:0003080!3.33e-15!42;UBERON:0001869!1.49e-14!32;UBERON:0001893!1.95e-14!34;UBERON:0005743!2.20e-14!86;UBERON:0001017!6.16e-14!82;UBERON:0002791!6.76e-14!33;UBERON:0000955!1.01e-12!69;UBERON:0006238!1.01e-12!69;UBERON:0003056!9.44e-12!61;UBERON:0002619!5.54e-11!22;UBERON:0001950!9.50e-11!20;UBERON:0000956!3.27e-10!25;UBERON:0000203!3.27e-10!25;UBERON:0004121!8.63e-10!169;UBERON:0000062!3.07e-09!511;UBERON:0000924!3.46e-09!173;UBERON:0006601!3.46e-09!173;UBERON:0000153!3.75e-09!129;UBERON:0007811!3.75e-09!129;UBERON:0000033!1.20e-08!123;UBERON:0000922!2.72e-08!612;UBERON:0002420!3.13e-08!9;UBERON:0007245!3.13e-08!9;UBERON:0010009!3.13e-08!9;UBERON:0010011!3.13e-08!9;UBERON:0000454!3.13e-08!9;UBERON:0002308!3.16e-08!9;UBERON:0000125!3.16e-08!9;UBERON:0000923!2.06e-07!604;UBERON:0005291!2.06e-07!604;UBERON:0006598!2.06e-07!604;UBERON:0002532!2.06e-07!604;UBERON:0002050!2.44e-07!605;UBERON:0005423!2.44e-07!605;UBERON:0002298!9.75e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.65e-10;1!UBERON:0002134;3.10e-10;1!UBERON:0000941;3.10e-10;1!UBERON:0001785;3.10e-10;1!UBERON:0002464;3.10e-10;1!UBERON:0004904;3.10e-10;1!UBERON:0001021;3.10e-10;1!UBERON:0005208;3.10e-10;1!UBERON:0004145;3.10e-10;1!UBERON:0005946;3.10e-10;1!UBERON:0005965;3.10e-10;1!UBERON:0002078;3.10e-10;1!UBERON:0002331;1.72e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0004911;1.65e-10;1!UBERON:0002134;3.10e-10;1!UBERON:0000941;3.10e-10;1!UBERON:0001785;3.10e-10;1!UBERON:0002464;3.10e-10;1!UBERON:0004904;3.10e-10;1!UBERON:0001021;3.10e-10;1!UBERON:0005208;3.10e-10;1!UBERON:0004145;3.10e-10;1!UBERON:0005946;3.10e-10;1!UBERON:0005965;3.10e-10;1!UBERON:0002078;3.10e-10;1!UBERON:0002331;1.72e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.65e-10,1;UBERON:0000941,2.84e-10,1;UBERON:0001785,2.84e-10,1;UBERON:0002464,2.84e-10,1;UBERON:0004904,2.84e-10,1;UBERON:0001021,2.84e-10,1;UBERON:0003902,2.84e-10,1;UBERON:0005425,2.84e-10,1;UBERON:0002134,3.40e-10,1;UBERON:0005208,3.40e-10,1;UBERON:0005946,3.40e-10,1;UBERON:0005965,3.40e-10,1;UBERON:0002078,3.40e-10,1;UBERON:0002331,1.56e-08,10;UBERON:0000358,1.56e-08,10;UBERON:0000307,1.56e-08,10;UBERON:0000091,1.56e-08,10;UBERON:0000087,1.56e-08,10;UBERON:0007010,1.56e-08,10;UBERON:0007806,1.56e-08,10;UBERON:0008780,1.56e-08,10;UBERON:0005728,1.56e-08,10 | |||
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|short_description=p6@CPNE8 | |short_description=p6@CPNE8 | ||
}} | }} |
Latest revision as of 06:07, 18 September 2015
Short description: | p6@CPNE8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CPNE8_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000550863_5end |
EntrezGene: | CPNE8 |
HGNC: | 23498 |
UniProt: | F8VZB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.65e-10 | 1 |
fat cell | 9.43e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.65e-10 | 1 |
cranial nerve II | 2.84e-10 | 1 |
cranial nerve | 2.84e-10 | 1 |
nerve trunk | 2.84e-10 | 1 |
nerve connecting eye with brain | 2.84e-10 | 1 |
nerve | 2.84e-10 | 1 |
retinal neural layer | 2.84e-10 | 1 |
presumptive neural retina | 2.84e-10 | 1 |
tricuspid valve | 3.40e-10 | 1 |
right atrium valve | 3.40e-10 | 1 |
outflow tract of atrium | 3.40e-10 | 1 |
outflow part of right atrium | 3.40e-10 | 1 |
right cardiac atrium | 3.40e-10 | 1 |
umbilical cord | 1.56e-08 | 10 |
blastocyst | 1.56e-08 | 10 |
blastula | 1.56e-08 | 10 |
bilaminar disc | 1.56e-08 | 10 |
inner cell mass | 1.56e-08 | 10 |
cleaving embryo | 1.56e-08 | 10 |
connecting stalk | 1.56e-08 | 10 |
inner cell mass derived epiblast | 1.56e-08 | 10 |
extraembryonic mesoderm | 1.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.65e-10 | 1 |
chondrosarcoma | 6.33e-10 | 1 |
extraosseous chondrosarcoma | 6.33e-10 | 1 |
myxoid chondrosarcoma | 6.33e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 6.33e-10 | 1 |