FFCP PHASE1:Hg19::chr17:79196733..79196744,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:79196733..79196744,- to FFCP PHASE1:Hg19::chr17:79196733..79196744,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22994 | |EntrezGene=22994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29511 | |HGNC=29511 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPN4,B2RN10 | |UniProt=Q9UPN4,B2RN10 | ||
|association_with_transcript=6bp_to_ENST00000374782,ENST00000450824,NM_001009811,NM_014984,uc002jzn.1,uc002jzo.1,uc002jzp.1,uc010wum.1_5end | |||
|cluster_id=chr17:79196733..79196744,- | |||
|description=CAGE_peak_2_at_AZI1_5end | |||
|id=chr17:79196733..79196744,- | |||
|ontology_enrichment_celltype=CL:0000066!1.87e-15!254;CL:0000148!1.19e-07!10;CL:0000541!1.19e-07!10;CL:0000063!4.28e-07!578;CL:0000548!8.34e-07!679;CL:0000004!8.34e-07!679;CL:0000255!8.34e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.38e-20;10!CL:0000147;3.70e-14;14!CL:0000710;2.36e-09;20!CL:0002567;7.81e-09;3!CL:0002322;1.71e-08;5!CL:0000082;2.13e-07;19!CL:0002077;8.96e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.99e-21,10;CL:0000541,3.99e-21,10;CL:0000147,1.57e-14,14;CL:0000066,9.12e-10,253;CL:0000710,1.33e-09,20;CL:0002567,1.84e-09,3;CL:0002322,3.14e-08,5;CL:0000333,1.10e-07,41;CL:0002077,2.46e-07,34;CL:0000082,6.26e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.56e-12;29!UBERON:0001041;4.53e-08;30 | |||
|ontology_enrichment_disease=DOID:305!7.07e-16!106;DOID:0050687!3.91e-14!143;DOID:162!6.12e-14!235;DOID:14566!2.25e-13!239 | |||
|ontology_enrichment_disease_v019=DOID:1325;8.11e-13;7!DOID:3904;8.11e-13;7!DOID:3905;8.32e-10;9!DOID:1324;9.67e-10;15!DOID:0050615;4.81e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.01e-11,7;DOID:3904,1.01e-11,7;DOID:1324,4.02e-09,15;DOID:3905,7.57e-09,9;DOID:305,1.79e-08,106;DOID:0050615,1.80e-08,16;DOID:5093,4.62e-07,4;DOID:1612,4.62e-07,4;DOID:0050687,9.55e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.01e-07;37!UBERON:0004802;2.13e-07;19!UBERON:0000115;2.13e-07;19!UBERON:0001737;3.48e-07;9!UBERON:0001557;3.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,4.41e-08,38;UBERON:0003258,4.41e-08,38;UBERON:0000072,4.55e-07,47;UBERON:0001737,6.18e-07,9;UBERON:0004802,6.26e-07,19;UBERON:0000115,6.26e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,2.09340350391728,1.09220686065086,0.527533956456907,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0.984968464614303,1.22400414746552,0.940364164434263,0.572471974262113,0.136874425072884,1.50651167513763,0.305653622991805,0.0821005894499457,0.314843125254717,0,0.383829398097213,0.464448369948228,0.919421224478927,0.6024118375565,0.739508020333575,0.542270404062111,0.142169232487422,0,0.553995408531877,0.802177789880567,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0.755751887377619,0.242584061187816,0,0.822335776043652,0.309706370895104,0.575384784644301,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0,0.622822248995575,0,0.521482918420201,0,0,0,0,0,0.425208599930087,0,0.112328631146495,0.150176892841506,0.16072558669708,0.570025487482497,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0,0.567208902984407,0.443458794925128,0.702678285545008,0.196468613246569,1.09288586487763,0,0.324547393654683,0,0.531831842075461,0.238490624305342,0,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0.735326160691737,0,0.17859945656816,0.44905874525234,0.450445921933289,1.53316637465883,0,0.549605231791222,1.31780417436063,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0.49333509683432,0,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0.910161361938026,1.43723628363248,0,0.500474079487857,0,0.438977620880838,0,0,0.567160915800105,0.538168907066586,0.213557388818567,0,1.20036438433761,0.103052529238439,0.257640540045629,0,0.506328996723799,0,0.504867548488229,0,0,0.355009592516614,0.201504196455281,0.508681776931463,0.386521706326594,0,0.286804595389004,1.46368447355514,1.19276791489337,1.39432731443422,0.518305275076852,1.00928340350251,0.36497735907583,0,0,1.38134921352481,0,0,1.0647612003586,1.01150814046861,1.20505514941741,0.661763836394364,0.217879444092406,1.66089433377768,0.674156540800822,0.196221465125346,2.30848294167834,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0.439001141634502,0,0,0.462942225792648,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0.380508304469197,1.58040879591855,1.71697232418975,0.984868024349589,0,0.148631162288728,0,0,0,0.268675568108545,0,1.15014803749563,0.492663237895943,0.264145302039678,0,0.144119953416961,0.25248486685276,1.71444314588856,1.90994212779139,3.51652341630141,1.71072446022705,1.43958489784653,4.80548892550268,2.00078502841405,0.224262168690721,0.87192013766656,0.22001485746285,0.129271715757778,0,0.845302752556,0,0,1.28603687131071,0,0.799266537048298,0,0,0.823240336780769,0,0.710783897485092,0,0,0,0.299918973546171,3.64871341923571,1.50677127429638,0,0,0,0,0.289562613335158,0.205476322550383,0,0.784596007954691,0,0,0.513372145118994,0.254094624222463,0,0,0.167516265334349,0.637938751653163,1.49801404789436,0,1.65766205374414,0,0.500170521059677,0,0,0.178428988797162,0,0.35142424497814,0.300946099727719,0,0,0,0.553107505625109,0.0868836144680828,0.391602314925481,0,0.206768026122887,0,0.213455115606889,0,0,0.30239029332968,0,0.460385919864187,0.561320188866147,0,0,0.321707842287215,0,0,0.532685175939381,0.246381468041427,0.519254429183621,0,1.57117284469109,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.262248829918848,0.451199612907412,0.231046011313244,0,1.46139224653261,0.316654886678627,0,0.510281115829547,0,0,0.541892875087706,1.00337954770971,0.764628819135115,0,0,0,0.261435451024901,0.256450125116389,0,0,0,2.38080608527693,1.56768049849117,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.267096106940212,0.661139661443912,0.192190067365106,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0.511795582622668,0.42793898803392,0,0,0.179872457583315,0,0,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,1.01455188481352,0,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0,0.349934720244983,0.288666338176536,0.670302275535787,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0.238231775457789,0,1.94541993357815,0,0,0.747768497892312,4.81239927631679,0.980160863924127,0,0.432807638929335,0.0711418433484141,0.159426272728822,0.399158742865633,1.7235483311913,0.635020748171649,0.649243880549111,0.561594356226918,1.369408074199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| ||
|short_description=p2@AZI1 | |||
}} | }} |
Latest revision as of 05:57, 18 September 2015
Short description: | p2@AZI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AZI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000374782, ENST00000450824, NM_001009811, NM_014984, uc002jzn.1, uc002jzo.1, uc002jzp.1, uc010wum.1_5end |
EntrezGene: | AZI1 |
HGNC: | 29511 |
UniProt: | Q9UPN4B2RN10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.99e-21 | 10 |
melanoblast | 3.99e-21 | 10 |
pigment cell | 1.57e-14 | 14 |
epithelial cell | 9.12e-10 | 253 |
neurecto-epithelial cell | 1.33e-09 | 20 |
light melanocyte | 1.84e-09 | 3 |
embryonic stem cell | 3.14e-08 | 5 |
migratory neural crest cell | 1.10e-07 | 41 |
ecto-epithelial cell | 2.46e-07 | 34 |
epithelial cell of lung | 6.26e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 4.41e-08 | 38 |
endoderm of foregut | 4.41e-08 | 38 |
segment of respiratory tract | 4.55e-07 | 47 |
larynx | 6.18e-07 | 9 |
respiratory tract epithelium | 6.26e-07 | 19 |
lung epithelium | 6.26e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.01e-11 | 7 |
bronchogenic carcinoma | 1.01e-11 | 7 |
lung cancer | 4.02e-09 | 15 |
lung carcinoma | 7.57e-09 | 9 |
carcinoma | 1.79e-08 | 106 |
respiratory system cancer | 1.80e-08 | 16 |
thoracic cancer | 4.62e-07 | 4 |
breast cancer | 4.62e-07 | 4 |
cell type cancer | 9.55e-07 | 143 |