FFCP PHASE1:Hg19::chr15:56657750..56657757,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29585 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENST00000558083_5end | |||
|cluster_id=chr15:56657750..56657757,+ | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_6_at_TEX9_5end | |||
|id=chr15:56657750..56657757,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.05e-20!24;CL:0000826!1.05e-20!24;CL:0000838!3.05e-08!52;CL:0000542!5.26e-08!53;CL:0000051!5.26e-08!53;CL:0000236!1.82e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.77e-55;24!CL:0000946;4.08e-18;1!CL:0000786;4.08e-18;1!CL:0000542;4.48e-15;53!CL:0000236;5.25e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.55e-55,24;CL:0000826,7.55e-55,24;CL:0000838,4.62e-25,52;CL:0000542,1.41e-24,53;CL:0000051,1.41e-24,53;CL:0000236,4.09e-19,14;CL:0000946,4.44e-18,1;CL:0000786,4.44e-18,1;CL:0000980,4.44e-18,1;CL:0002087,7.14e-11,115;CL:0002031,2.16e-10,120;CL:0000785,1.03e-09,2;CL:0000955,1.03e-09,2;CL:0000818,1.03e-09,2;CL:0000954,1.03e-09,2;CL:0000816,1.03e-09,2;CL:0000738,4.34e-09,136;CL:0002032,1.46e-07,161;CL:0000837,1.46e-07,161;CL:0000037,3.26e-07,168;CL:0000817,6.88e-07,3;CL:0000988,8.32e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.48e-15;53!UBERON:0004872;2.35e-10;7!CL:0000954;9.87e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.78e-27;10!DOID:630;3.16e-18;1!DOID:0050177;3.16e-18;1!DOID:0050427;3.16e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.94e-27,10;DOID:630,3.16e-18,1;DOID:0050177,3.16e-18,1;DOID:0050427,3.16e-18,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.03e-23;3!UBERON:0004177;4.11e-14;5!UBERON:0005057;4.11e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.99e-23,3;UBERON:0004854,8.99e-23,3;UBERON:0009034,8.99e-23,3;UBERON:0002095,8.99e-23,3;UBERON:0004782,8.99e-23,3;UBERON:0003281,8.99e-23,3;UBERON:0009664,8.99e-23,3;UBERON:0002296,8.99e-23,3;UBERON:0005602,8.99e-23,3;UBERON:0001179,8.99e-23,3;UBERON:0006293,8.99e-23,3;UBERON:0004177,2.46e-10,7;UBERON:0005057,2.46e-10,7;UBERON:0000945,3.70e-09,8;UBERON:0010039,3.70e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,1.54934401160603,1.9903692548239,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,1.28019066769952,0.400395987036012,0,1.32208974556972,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0.540031437238115,0,0.534120355637366,0,0,0,0,0,0.159426272728822,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.828851746593443,0,0,1.23084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.635746315921515,0,0,0,0,0,0.353830258013357,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0.193978032976839,0,0,0,0,0.126621591911757,0.586654148204409,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0.0846733320657845,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0.496166021811951,0,8.28189668990092,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18944576355981,0,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,1.03382309777839,0,1.69899965072379,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0,0.101988829741982,0,0.459474497674225,0,0,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0.80822463617505,0,0,0.162806537221949,0,0,0,0,0,0,0,0,3.20568492303233 | |||
|short_description=p6@TEX9 | |||
}} |
Latest revision as of 05:28, 18 September 2015
Short description: | p6@TEX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TEX9_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | -19bp_to_ENST00000558083_5end |
EntrezGene: | TEX9 |
HGNC: | 29585 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.55e-55 | 24 |
pro-B cell | 7.55e-55 | 24 |
lymphoid lineage restricted progenitor cell | 4.62e-25 | 52 |
lymphocyte | 1.41e-24 | 53 |
common lymphoid progenitor | 1.41e-24 | 53 |
B cell | 4.09e-19 | 14 |
antibody secreting cell | 4.44e-18 | 1 |
plasma cell | 4.44e-18 | 1 |
plasmablast | 4.44e-18 | 1 |
nongranular leukocyte | 7.14e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.16e-10 | 120 |
mature B cell | 1.03e-09 | 2 |
pre-B-II cell | 1.03e-09 | 2 |
transitional stage B cell | 1.03e-09 | 2 |
small pre-B-II cell | 1.03e-09 | 2 |
immature B cell | 1.03e-09 | 2 |
leukocyte | 4.34e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.46e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.46e-07 | 161 |
hematopoietic stem cell | 3.26e-07 | 168 |
precursor B cell | 6.88e-07 | 3 |
hematopoietic cell | 8.32e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.99e-23 | 3 |
gastrointestinal system mesentery | 8.99e-23 | 3 |
stomach region | 8.99e-23 | 3 |
mesentery | 8.99e-23 | 3 |
gastrointestinal system serosa | 8.99e-23 | 3 |
mesentery of stomach | 8.99e-23 | 3 |
gut mesentery | 8.99e-23 | 3 |
dorsal mesentery | 8.99e-23 | 3 |
dorsal mesogastrium | 8.99e-23 | 3 |
peritoneal cavity | 8.99e-23 | 3 |
spleen primordium | 8.99e-23 | 3 |
hemopoietic organ | 2.46e-10 | 7 |
immune organ | 2.46e-10 | 7 |
stomach | 3.70e-09 | 8 |
food storage organ | 3.70e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.94e-27 | 10 |
genetic disease | 3.16e-18 | 1 |
monogenic disease | 3.16e-18 | 1 |
xeroderma pigmentosum | 3.16e-18 | 1 |