FFCP PHASE1:Hg19::chr11:47470650..47470653,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5913 | |EntrezGene=5913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9863 | |HGNC=9863 | ||
|TSSclassifier=strong | |||
|UniProt=E9PK11 | |UniProt=E9PK11 | ||
|association_with_transcript=34bp_to_ENST00000529341_5end | |association_with_transcript=34bp_to_ENST00000529341_5end | ||
|cluster_id=chr11:47470650..47470653,- | |||
|coexpression_cluster_id=C737 | |||
|description=CAGE_peak_5_at_RAPSN_5end | |description=CAGE_peak_5_at_RAPSN_5end | ||
|id=chr11:47470650..47470653,- | |id=chr11:47470650..47470653,- | ||
|ontology_enrichment_celltype=CL:0000188!2.95e-53!9;CL:0000515!3.93e-40!4;CL:0000680!4.96e-16!57;CL:0000056!4.96e-16!57;CL:0000355!4.96e-16!57;CL:0002242!1.78e-11!1;CL:0000228!1.78e-11!1;CL:0002372!1.78e-11!1;CL:0000183!6.90e-10!59;CL:0000222!1.65e-08!119;CL:0000187!2.36e-08!54;CL:0000393!1.90e-07!60;CL:0000211!1.90e-07!60 | |ontology_enrichment_celltype=CL:0000188!2.95e-53!9;CL:0000515!3.93e-40!4;CL:0000680!4.96e-16!57;CL:0000056!4.96e-16!57;CL:0000355!4.96e-16!57;CL:0002242!1.78e-11!1;CL:0000228!1.78e-11!1;CL:0002372!1.78e-11!1;CL:0000183!6.90e-10!59;CL:0000222!1.65e-08!119;CL:0000187!2.36e-08!54;CL:0000393!1.90e-07!60;CL:0000211!1.90e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000228;6.31e-21;1!CL:0002372;6.31e-21;1!CL:0000056;1.41e-20;4!CL:0000188;2.26e-20;9!CL:0000680;3.34e-12;7!CL:0002262;2.47e-11;2!CL:1000398;2.47e-11;2!CL:0002575;2.47e-11;2!CL:0000632;7.26e-08;3!CL:0000515;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,6.31e-21,1;CL:0002372,6.31e-21,1;CL:0000515,1.15e-20,4;CL:0000188,2.41e-20,9;CL:0002262,2.23e-11,2;CL:1000398,2.23e-11,2;CL:0002575,2.73e-11,2;CL:0000632,6.78e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000515;1.41e-20;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!2.59e-20!2;UBERON:0001134!6.88e-15!61;UBERON:0002036!6.88e-15!61;UBERON:0003082!6.88e-15!61;UBERON:0002385!2.26e-14!63;UBERON:0001015!2.26e-14!63;UBERON:0000383!2.26e-14!63;UBERON:0001723!4.14e-14!3;UBERON:0001033!4.14e-14!3;UBERON:0010056!4.14e-14!3;UBERON:0004290!8.56e-13!70;UBERON:0000486!1.03e-10!82;UBERON:0000914!1.44e-10!83;UBERON:0002329!1.44e-10!83;UBERON:0003077!1.44e-10!83;UBERON:0003059!1.44e-10!83;UBERON:0007282!1.44e-10!83;UBERON:0009618!1.44e-10!83;UBERON:0007285!1.44e-10!83;UBERON:0000490!1.37e-08!138;UBERON:0005256!3.19e-08!143 | |ontology_enrichment_uberon=UBERON:0000341!2.59e-20!2;UBERON:0001134!6.88e-15!61;UBERON:0002036!6.88e-15!61;UBERON:0003082!6.88e-15!61;UBERON:0002385!2.26e-14!63;UBERON:0001015!2.26e-14!63;UBERON:0000383!2.26e-14!63;UBERON:0001723!4.14e-14!3;UBERON:0001033!4.14e-14!3;UBERON:0010056!4.14e-14!3;UBERON:0004290!8.56e-13!70;UBERON:0000486!1.03e-10!82;UBERON:0000914!1.44e-10!83;UBERON:0002329!1.44e-10!83;UBERON:0003077!1.44e-10!83;UBERON:0003059!1.44e-10!83;UBERON:0007282!1.44e-10!83;UBERON:0009618!1.44e-10!83;UBERON:0007285!1.44e-10!83;UBERON:0000490!1.37e-08!138;UBERON:0005256!3.19e-08!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.61e-20;16!UBERON:0002036;4.61e-20;16!UBERON:0001281;2.47e-11;2!UBERON:0003497;2.47e-11;2!UBERON:0003909;2.47e-11;2!UBERON:0003835;2.47e-11;2!UBERON:0002385;1.37e-09;31!UBERON:0001015;1.37e-09;31!UBERON:0000383;1.37e-09;31!UBERON:0001280;5.54e-08;3!UBERON:0004647;5.54e-08;3!UBERON:0001723;7.26e-08;3!UBERON:0001033;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.23e-11,2;UBERON:0003497,2.23e-11,2;UBERON:0003909,2.23e-11,2;UBERON:0003835,2.23e-11,2;UBERON:0001280,5.18e-08,3;UBERON:0004647,5.18e-08,3;UBERON:0005171,5.18e-08,3;UBERON:0001723,8.29e-08,3;UBERON:0001033,8.29e-08,3;UBERON:0010056,8.29e-08,3 | |||
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|short_description=p5@RAPSN | |short_description=p5@RAPSN | ||
}} | }} |
Latest revision as of 05:28, 18 September 2015
Short description: | p5@RAPSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAPSN_5end |
Coexpression cluster: | C737_rhabdomyosarcoma_skeletal_mesenchymal_Skeletal_Pericytes_tongue_diaphragm |
Association with transcript: | 34bp_to_ENST00000529341_5end |
EntrezGene: | RAPSN |
HGNC: | 9863 |
UniProt: | E9PK11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 6.31e-21 | 1 |
myotube | 6.31e-21 | 1 |
skeletal muscle myoblast | 1.15e-20 | 4 |
cell of skeletal muscle | 2.41e-20 | 9 |
endothelial cell of sinusoid | 2.23e-11 | 2 |
endothelial cell of hepatic sinusoid | 2.23e-11 | 2 |
central nervous system pericyte | 2.73e-11 | 2 |
hepatic stellate cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.23e-11 | 2 |
abdomen blood vessel | 2.23e-11 | 2 |
sinusoid | 2.23e-11 | 2 |
abdominal segment blood vessel | 2.23e-11 | 2 |
liver parenchyma | 5.18e-08 | 3 |
liver lobule | 5.18e-08 | 3 |
hepatic duct | 5.18e-08 | 3 |
tongue | 8.29e-08 | 3 |
gustatory system | 8.29e-08 | 3 |
future tongue | 8.29e-08 | 3 |