FFCP PHASE1:Hg19::chr11:47430019..47430027,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91252 | |EntrezGene=91252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20859 | |HGNC=20859 | ||
|TSSclassifier=strong | |||
|UniProt=Q96H72 | |UniProt=Q96H72 | ||
|association_with_transcript=-18bp_to_NM_001128225,NM_152264_5end | |association_with_transcript=-18bp_to_NM_001128225,NM_152264_5end | ||
|cluster_id=chr11:47430019..47430027,+ | |||
|description=CAGE_peak_6_at_SLC39A13_5end | |description=CAGE_peak_6_at_SLC39A13_5end | ||
|id=chr11:47430019..47430027,+ | |id=chr11:47430019..47430027,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000898;6.75e-09;3!CL:0000895;4.55e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,8.74e-09,3;CL:0000810,6.12e-07,1;CL:0000895,6.12e-07,1;CL:0002436,6.12e-07,1;CL:0002427,6.12e-07,1;CL:0002428,6.12e-07,1;CL:0002429,6.12e-07,1;CL:0002433,6.12e-07,1;CL:0002431,6.12e-07,1;CL:0002432,6.12e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.59e-07;1!CL:0002427;4.55e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.05e-09!94;UBERON:0001016!6.05e-09!94;UBERON:0002616!7.37e-08!59;UBERON:0005743!6.04e-07!86;UBERON:0002346!9.69e-07!90 | |ontology_enrichment_uberon=UBERON:0000073!6.05e-09!94;UBERON:0001016!6.05e-09!94;UBERON:0002616!7.37e-08!59;UBERON:0005743!6.04e-07!86;UBERON:0002346!9.69e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;6.45e-13;2!UBERON:0002021;3.58e-11;5!UBERON:0002114;1.33e-08;2!UBERON:0000941;1.59e-07;1!UBERON:0001785;1.59e-07;1!UBERON:0002464;1.59e-07;1!UBERON:0004904;1.59e-07;1!UBERON:0001021;1.59e-07;1!UBERON:0007190;4.55e-07;1!UBERON:0001950;9.98e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.09e-13,2;UBERON:0002021,2.11e-11,5;UBERON:0002114,1.15e-08,2;UBERON:0000941,1.46e-07,1;UBERON:0001785,1.46e-07,1;UBERON:0002464,1.46e-07,1;UBERON:0004904,1.46e-07,1;UBERON:0001021,1.46e-07,1;UBERON:0003902,1.46e-07,1;UBERON:0005425,1.46e-07,1;UBERON:0001016,9.35e-07,89;UBERON:0001950,9.71e-07,20 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.37129905888014,0.662794751455832,0,0,0,0.975865597581014,0,0.816002764977012,0.313454721478088,0,0.410623275218653,0.502170558379211,0.0764134057479513,0,0.157421562627358,0,0.383829398097213,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0.880801318004542,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0.464858073811369,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0.434377689410233,0.605399502633369,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0,0,0.954053754535364,0,0.587237189370939,0,0,1.68152568894461,0.526768169550154,0.983548850569165,0.393010762749165,0.616804496998528,0.334372990781356,0.977766799900771,0.473447805734733,0,0.111410456885174,2.06224135232386,0.664601683750863,0.270803863765016,0.640456598628376,0.520237390239513,0.164437904603676,0.552700035571697,0.289803085735052,0.889719378972363,0.535081656179426,0,0.113309342697566,1.14966148080576,1.37450978193052,0.506039384039006,0.637130828648193,0,0,0.602300476311091,0.895906278080929,0,1.18388626022008,0.821127996921047,0.403213486449465,0.802320587350522,0.289648807765598,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0.886917589850256,0.351339142772504,0.0654895377488563,0,0,0.649094787309367,0,0,0.238490624305342,0,0.371457501329565,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0.805658634218294,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,1.2333377420858,0,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0,0.570471821544449,0,0,0.161872944368132,0.140450806702248,0,0.368502951935304,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0.226864366320042,0.179389635688862,0.640672166455702,0.211931901159562,0,0.103052529238439,0.515281080091258,0,0,0.0974370051611986,0,0.276149695926898,0,0.355009592516614,0.201504196455281,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.518305275076852,0.252320850875628,0,0,1.28648187638577,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.352226082707465,0,0,0.190254152234598,0,0,0.246217006087397,0,0.297262324577456,0.93733833986777,0.16798212819886,0,0.0895585227028483,0,0,0,0.44024217006613,0,0.288239906833923,0.25248486685276,0.317489471460845,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0.571652865261156,0.224262168690721,0,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,1.74306691720059,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0.410952645100767,0.358121926479791,0.224170287987055,0.591092280605782,0.646882724578552,0.641715181398742,0.254094624222463,0,0,0.670065061337395,1.27587750330633,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.260650843404249,0.783204629850962,1.02943027143257,1.03384013061444,0.431428401637234,0.426910231213777,0.303127571446259,0,1.20956117331872,0.496215615637554,0.153461973288062,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0.902399225814824,0.0770153371044148,0,0,0,1.13733384070897,0,0.215915916102139,1.54227252690289,0,0,0,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0.328014645699706,0,0.515205058238611,0.27470839445503,0.082509499920588,0,0,0,0.290012154876366,0.308097234229289,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0,0.405820753925408,0.6196469961995,0,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.470719003883896,0,0,0.443430153536676,0,1.01489521846434,0,0.569647187174163,0,0.411362273086194,0,0,0,0,0,0,0.371606350251437,0,0.213425530045242,0.956557636372934,0,0,0,0.324621940274555,0,0.684704037099577,0,2.50634477090067,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0.447352215784832,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0.146508179271894,0.242721043499027,0,0,0.47748896947538,0.890894042497916,0.614321404198464,0,0,0,0,0.422250816255987,0.597743964753209,0.276283915531148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| ||
|short_description=p6@SLC39A13 | |short_description=p6@SLC39A13 | ||
}} | }} |
Latest revision as of 05:23, 18 September 2015
Short description: | p6@SLC39A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC39A13_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_NM_001128225, NM_152264_5end |
EntrezGene: | SLC39A13 |
HGNC: | 20859 |
UniProt: | Q96H72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 8.74e-09 | 3 |
CD4-positive, alpha-beta thymocyte | 6.12e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.12e-07 | 1 |
mature CD4 single-positive thymocyte | 6.12e-07 | 1 |
resting double-positive thymocyte | 6.12e-07 | 1 |
double-positive blast | 6.12e-07 | 1 |
CD69-positive double-positive thymocyte | 6.12e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.12e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.12e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.12e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.09e-13 | 2 |
occipital lobe | 2.11e-11 | 5 |
duodenum | 1.15e-08 | 2 |
cranial nerve II | 1.46e-07 | 1 |
cranial nerve | 1.46e-07 | 1 |
nerve trunk | 1.46e-07 | 1 |
nerve connecting eye with brain | 1.46e-07 | 1 |
nerve | 1.46e-07 | 1 |
retinal neural layer | 1.46e-07 | 1 |
presumptive neural retina | 1.46e-07 | 1 |
nervous system | 9.35e-07 | 89 |
neocortex | 9.71e-07 | 20 |