FFCP PHASE1:Hg19::chr1:161167199..161167216,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4720 | |EntrezGene=4720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7708 | |HGNC=7708 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000496133_5end | |association_with_transcript=0bp_to_ENST00000496133_5end | ||
|cluster_id=chr1:161167199..161167216,+ | |||
|description=CAGE_peak_2_at_NDUFS2_5end | |description=CAGE_peak_2_at_NDUFS2_5end | ||
|id=chr1:161167199..161167216,+ | |id=chr1:161167199..161167216,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.39e-45!180;CL:0000057!7.97e-31!75;CL:0000183!1.83e-21!59;CL:0000680!3.00e-21!57;CL:0000056!3.00e-21!57;CL:0000355!3.00e-21!57;CL:0000187!9.15e-21!54;CL:0000393!1.14e-16!60;CL:0000211!1.14e-16!60;CL:0000192!5.68e-16!42;CL:0000514!5.68e-16!42;CL:0002620!7.58e-15!23;CL:0000048!4.55e-12!430;CL:0000723!3.86e-11!436;CL:0000359!5.60e-11!32;CL:0000034!8.52e-11!444;CL:0000222!2.01e-09!119;CL:0002334!8.77e-08!12;CL:0002371!2.86e-07!591;CL:0002570!4.87e-07!8 | |ontology_enrichment_celltype=CL:0000055!3.39e-45!180;CL:0000057!7.97e-31!75;CL:0000183!1.83e-21!59;CL:0000680!3.00e-21!57;CL:0000056!3.00e-21!57;CL:0000355!3.00e-21!57;CL:0000187!9.15e-21!54;CL:0000393!1.14e-16!60;CL:0000211!1.14e-16!60;CL:0000192!5.68e-16!42;CL:0000514!5.68e-16!42;CL:0002620!7.58e-15!23;CL:0000048!4.55e-12!430;CL:0000723!3.86e-11!436;CL:0000359!5.60e-11!32;CL:0000034!8.52e-11!444;CL:0000222!2.01e-09!119;CL:0002334!8.77e-08!12;CL:0002371!2.86e-07!591;CL:0002570!4.87e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.94e-23;23!CL:0000057;6.89e-19;73!CL:0000187;2.32e-11;55!CL:0002570;3.24e-10;8!CL:0002334;8.94e-10;12!CL:0000192;1.49e-09;43!CL:0002320;1.93e-09;188!CL:0000393;1.99e-09;61!CL:0000211;1.99e-09;61!CL:0000359;8.06e-09;32!CL:0000188;8.34e-09;9!CL:0000723;9.61e-09;61!CL:0002551;3.39e-08;6!CL:0000134;3.46e-08;55!CL:0002559;5.86e-08;5!CL:0000048;9.18e-08;58!CL:0002556;2.14e-07;6!CL:0002552;3.28e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.89e-45,76;CL:0000048,1.35e-26,427;CL:0000723,1.15e-25,433;CL:0000034,1.84e-24,441;CL:0002620,3.44e-23,23;CL:0000187,3.85e-20,55;CL:0000680,1.31e-19,58;CL:0000056,1.31e-19,58;CL:0000355,1.31e-19,58;CL:0000393,5.36e-17,61;CL:0000211,5.36e-17,61;CL:0000192,7.11e-14,43;CL:0000514,7.11e-14,43;CL:0002320,2.97e-12,361;CL:0000134,5.23e-12,354;CL:0000219,1.05e-10,386;CL:0002570,2.66e-10,8;CL:0002334,5.88e-10,12;CL:0000359,2.25e-09,32;CL:0000188,6.06e-09,9;CL:0002551,3.00e-08,6;CL:0002559,5.18e-08,5;CL:0002552,1.82e-07,5;CL:0002556,4.10e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000355;4.03e-11;58!CL:0000514;1.49e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;7.72e-07;5!DOID:450;7.72e-07;5!DOID:66;7.72e-07;5!DOID:423;7.72e-07;5!DOID:0080000;7.72e-07;5!DOID:11722;7.72e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.41e-07,5;DOID:450,9.41e-07,5;DOID:66,9.41e-07,5;DOID:423,9.41e-07,5;DOID:0080000,9.41e-07,5;DOID:11722,9.41e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.71e-28!83;UBERON:0002329!9.71e-28!83;UBERON:0003077!9.71e-28!83;UBERON:0003059!9.71e-28!83;UBERON:0007282!9.71e-28!83;UBERON:0009618!9.71e-28!83;UBERON:0007285!9.71e-28!83;UBERON:0004290!2.67e-26!70;UBERON:0002385!1.89e-20!63;UBERON:0001015!1.89e-20!63;UBERON:0000383!1.89e-20!63;UBERON:0000486!3.34e-20!82;UBERON:0001134!3.76e-20!61;UBERON:0002036!3.76e-20!61;UBERON:0003082!3.76e-20!61;UBERON:0002049!3.98e-14!79;UBERON:0007798!3.98e-14!79;UBERON:0000475!4.42e-14!365;UBERON:0005256!2.92e-13!143;UBERON:0002199!2.99e-12!45;UBERON:0002416!2.99e-12!45;UBERON:0003102!1.20e-11!95;UBERON:0001637!2.84e-11!42;UBERON:0003509!2.84e-11!42;UBERON:0004572!2.84e-11!42;UBERON:0002097!7.66e-11!40;UBERON:0000055!1.75e-10!69;UBERON:0004535!4.38e-10!110;UBERON:0001981!2.37e-09!60;UBERON:0007500!2.37e-09!60;UBERON:0004537!2.37e-09!60;UBERON:0006965!2.37e-09!60;UBERON:0000490!2.64e-09!138;UBERON:0001009!2.83e-09!113;UBERON:0004872!3.72e-09!84;UBERON:0004573!3.91e-09!33;UBERON:0004571!3.91e-09!33;UBERON:0002100!5.21e-09!216;UBERON:0002067!4.66e-08!9;UBERON:0004016!4.66e-08!9;UBERON:0010083!4.66e-08!9;UBERON:0000468!6.25e-08!659;UBERON:0001013!1.61e-07!14;UBERON:0000119!1.67e-07!312;UBERON:0000483!7.93e-07!309 | |ontology_enrichment_uberon=UBERON:0000914!9.71e-28!83;UBERON:0002329!9.71e-28!83;UBERON:0003077!9.71e-28!83;UBERON:0003059!9.71e-28!83;UBERON:0007282!9.71e-28!83;UBERON:0009618!9.71e-28!83;UBERON:0007285!9.71e-28!83;UBERON:0004290!2.67e-26!70;UBERON:0002385!1.89e-20!63;UBERON:0001015!1.89e-20!63;UBERON:0000383!1.89e-20!63;UBERON:0000486!3.34e-20!82;UBERON:0001134!3.76e-20!61;UBERON:0002036!3.76e-20!61;UBERON:0003082!3.76e-20!61;UBERON:0002049!3.98e-14!79;UBERON:0007798!3.98e-14!79;UBERON:0000475!4.42e-14!365;UBERON:0005256!2.92e-13!143;UBERON:0002199!2.99e-12!45;UBERON:0002416!2.99e-12!45;UBERON:0003102!1.20e-11!95;UBERON:0001637!2.84e-11!42;UBERON:0003509!2.84e-11!42;UBERON:0004572!2.84e-11!42;UBERON:0002097!7.66e-11!40;UBERON:0000055!1.75e-10!69;UBERON:0004535!4.38e-10!110;UBERON:0001981!2.37e-09!60;UBERON:0007500!2.37e-09!60;UBERON:0004537!2.37e-09!60;UBERON:0006965!2.37e-09!60;UBERON:0000490!2.64e-09!138;UBERON:0001009!2.83e-09!113;UBERON:0004872!3.72e-09!84;UBERON:0004573!3.91e-09!33;UBERON:0004571!3.91e-09!33;UBERON:0002100!5.21e-09!216;UBERON:0002067!4.66e-08!9;UBERON:0004016!4.66e-08!9;UBERON:0010083!4.66e-08!9;UBERON:0000468!6.25e-08!659;UBERON:0001013!1.61e-07!14;UBERON:0000119!1.67e-07!312;UBERON:0000483!7.93e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.11e-13;41!UBERON:0002199;6.47e-13;46!UBERON:0002416;6.47e-13;46!UBERON:0003102;7.08e-12;50!UBERON:0002067;7.79e-12;9!UBERON:0002385;1.33e-09;31!UBERON:0001015;1.33e-09;31!UBERON:0000383;1.33e-09;31!UBERON:0002384;1.68e-09;198!UBERON:0001013;3.69e-09;14!UBERON:0002073;5.86e-08;5!UBERON:0001758;2.14e-07;6!UBERON:0003672;2.14e-07;6!UBERON:0004573;5.90e-07;33!UBERON:0004571;5.90e-07;33 | |||
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| ||
|short_description=p2@NDUFS2 | |short_description=p2@NDUFS2 | ||
}} | }} |
Latest revision as of 05:15, 18 September 2015
Short description: | p2@NDUFS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDUFS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000496133_5end |
EntrezGene: | NDUFS2 |
HGNC: | 7708 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.89e-45 | 76 |
multi fate stem cell | 1.35e-26 | 427 |
somatic stem cell | 1.15e-25 | 433 |
stem cell | 1.84e-24 | 441 |
skin fibroblast | 3.44e-23 | 23 |
muscle cell | 3.85e-20 | 55 |
muscle precursor cell | 1.31e-19 | 58 |
myoblast | 1.31e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-19 | 58 |
electrically responsive cell | 5.36e-17 | 61 |
electrically active cell | 5.36e-17 | 61 |
smooth muscle cell | 7.11e-14 | 43 |
smooth muscle myoblast | 7.11e-14 | 43 |
connective tissue cell | 2.97e-12 | 361 |
mesenchymal cell | 5.23e-12 | 354 |
motile cell | 1.05e-10 | 386 |
mesenchymal stem cell of adipose | 2.66e-10 | 8 |
preadipocyte | 5.88e-10 | 12 |
vascular associated smooth muscle cell | 2.25e-09 | 32 |
cell of skeletal muscle | 6.06e-09 | 9 |
fibroblast of dermis | 3.00e-08 | 6 |
hair follicle cell | 5.18e-08 | 5 |
fibroblast of gingiva | 1.82e-07 | 5 |
fibroblast of periodontium | 4.10e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.41e-07 | 5 |
myotonic disease | 9.41e-07 | 5 |
muscle tissue disease | 9.41e-07 | 5 |
myopathy | 9.41e-07 | 5 |
muscular disease | 9.41e-07 | 5 |
myotonic dystrophy | 9.41e-07 | 5 |