FFCP PHASE1:Hg19::chr12:32655048..32655108,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19125 | |||
|TSSclassifier=strong | |||
|UniProt=G3XA97,E9PNX0,Q96M96,F8VVF1 | |||
|association_with_transcript=0bp_to_ENST00000266482,ENST00000395740,ENST00000427716,ENST00000473513,ENST00000493087,ENST00000497153,ENST00000551984_5end | |||
|cluster_id=chr12:32655048..32655108,+ | |||
|description=CAGE_peak_6_at_FGD4_5end | |||
|id=chr12:32655048..32655108,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.49e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.01e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.84e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.61e-40!94;UBERON:0001016!4.61e-40!94;UBERON:0005743!2.59e-36!86;UBERON:0001017!7.73e-35!82;UBERON:0007023!6.50e-34!115;UBERON:0001049!1.21e-32!57;UBERON:0005068!1.21e-32!57;UBERON:0006241!1.21e-32!57;UBERON:0007135!1.21e-32!57;UBERON:0002346!1.35e-32!90;UBERON:0002780!7.83e-31!41;UBERON:0001890!7.83e-31!41;UBERON:0006240!7.83e-31!41;UBERON:0003075!1.23e-30!86;UBERON:0007284!1.23e-30!86;UBERON:0003080!1.31e-29!42;UBERON:0002616!6.04e-29!59;UBERON:0003056!5.86e-28!61;UBERON:0000924!1.64e-27!173;UBERON:0006601!1.64e-27!173;UBERON:0000955!3.07e-27!69;UBERON:0006238!3.07e-27!69;UBERON:0004121!9.04e-26!169;UBERON:0001893!1.86e-25!34;UBERON:0002020!3.08e-25!34;UBERON:0003528!3.08e-25!34;UBERON:0002791!9.97e-25!33;UBERON:0001869!5.37e-24!32;UBERON:0000153!7.91e-20!129;UBERON:0007811!7.91e-20!129;UBERON:0000033!1.13e-19!123;UBERON:0000956!2.04e-18!25;UBERON:0000203!2.04e-18!25;UBERON:0002619!2.15e-17!22;UBERON:0001950!7.44e-16!20;UBERON:0000483!2.11e-14!309;UBERON:0000119!4.19e-14!312;UBERON:0000481!7.18e-10!347;UBERON:0000475!1.60e-09!365;UBERON:0000025!3.10e-09!194;UBERON:0000922!3.92e-09!612;UBERON:0004111!4.51e-09!241;UBERON:0000477!5.77e-09!286;UBERON:0000468!7.73e-09!659;UBERON:0002420!1.54e-08!9;UBERON:0007245!1.54e-08!9;UBERON:0010009!1.54e-08!9;UBERON:0010011!1.54e-08!9;UBERON:0000454!1.54e-08!9;UBERON:0002308!2.82e-08!9;UBERON:0000125!2.82e-08!9;UBERON:0002050!1.26e-07!605;UBERON:0005423!1.26e-07!605;UBERON:0000923!1.77e-07!604;UBERON:0005291!1.77e-07!604;UBERON:0006598!1.77e-07!604;UBERON:0002532!1.77e-07!604;UBERON:0000064!4.12e-07!219;UBERON:0009663!5.39e-07!7;UBERON:0001894!9.19e-07!7;UBERON:0006222!9.19e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.01e-30;41!UBERON:0001890;1.01e-30;41!UBERON:0001893;1.58e-29;34!UBERON:0003528;2.32e-29;34!UBERON:0002020;2.32e-29;34!UBERON:0001869;2.62e-29;32!UBERON:0002791;2.74e-29;32!UBERON:0000073;6.80e-26;53!UBERON:0002616;6.80e-26;53!UBERON:0002619;1.22e-24;22!UBERON:0000956;2.02e-24;25!UBERON:0000203;2.02e-24;25!UBERON:0001950;2.10e-22;20!UBERON:0001017;1.16e-18;75!UBERON:0000955;2.66e-18;68!UBERON:0001016;3.46e-18;83!UBERON:0002420;1.32e-11;9!UBERON:0007245;1.32e-11;9!UBERON:0010009;1.32e-11;9!UBERON:0010011;1.32e-11;9!UBERON:0000454;1.32e-11;9!UBERON:0000125;2.79e-11;9!UBERON:0002308;2.79e-11;9!UBERON:0007023;1.88e-10;114!UBERON:0009663;2.04e-09;7!UBERON:0011216;2.79e-09;132!UBERON:0001894;4.94e-09;7!UBERON:0001871;3.92e-08;6!UBERON:0002298;1.15e-07;6!UBERON:0000200;1.45e-07;6!UBERON:0000349;3.13e-07;5!UBERON:0002021;8.36e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.53e-53,89;UBERON:0001017,5.91e-49,81;UBERON:0001049,2.93e-48,56;UBERON:0005068,2.93e-48,56;UBERON:0006241,2.93e-48,56;UBERON:0007135,2.93e-48,56;UBERON:0000073,5.10e-45,53;UBERON:0002616,5.10e-45,53;UBERON:0002346,6.07e-45,86;UBERON:0003075,6.65e-43,82;UBERON:0007284,6.65e-43,82;UBERON:0002780,1.39e-42,41;UBERON:0001890,1.39e-42,41;UBERON:0003080,1.39e-42,41;UBERON:0006240,1.39e-42,41;UBERON:0000955,2.45e-40,68;UBERON:0006238,2.45e-40,68;UBERON:0004121,3.36e-38,171;UBERON:0000924,3.36e-38,171;UBERON:0006601,3.36e-38,171;UBERON:0010371,4.17e-37,104;UBERON:0003056,2.44e-36,61;UBERON:0007023,1.08e-35,114;UBERON:0001893,9.28e-35,34;UBERON:0003528,1.91e-34,34;UBERON:0002020,1.91e-34,34;UBERON:0001869,1.24e-32,32;UBERON:0002791,1.68e-32,32;UBERON:0010314,3.60e-26,132;UBERON:0002619,1.36e-24,22;UBERON:0000956,1.52e-24,25;UBERON:0000203,1.52e-24,25;UBERON:0011216,2.08e-24,223;UBERON:0001950,2.39e-22,20;UBERON:0002420,1.05e-11,9;UBERON:0007245,1.05e-11,9;UBERON:0010009,1.05e-11,9;UBERON:0010011,1.05e-11,9;UBERON:0000454,1.05e-11,9;UBERON:0000125,2.52e-11,9;UBERON:0002308,2.52e-11,9;UBERON:0000025,2.76e-10,192;UBERON:0000483,3.52e-10,306;UBERON:0000119,7.68e-10,309;UBERON:0009663,1.81e-09,7;UBERON:0001894,3.92e-09,7;UBERON:0006222,3.92e-09,7;UBERON:0001871,4.38e-08,6;UBERON:0003076,8.68e-08,15;UBERON:0003057,8.68e-08,15;UBERON:0002298,1.08e-07,6;UBERON:0004111,1.26e-07,240;UBERON:0000200,1.61e-07,6;UBERON:0000349,2.73e-07,5;UBERON:0002021,8.79e-07,5 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.704772020479856,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0,0,6.93091576576261,8.28493439319789,0,0,0.730310090387373,0,0,0,0,2.86235987131057,0.684372125364421,1.88313959392204,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.01392563272577,0,0,5.38848457835187,0.886917589850256,2.0202000709419,7.7932549921139,0,0.370784442784429,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,0,0.419499436209906,4.12677062910101,0,0.258416759169329,1.42306505074684,1.67360306382335,0,0.760272105718513,0,2.20597848207521,0,1.07159673940896,0.44905874525234,0.450445921933289,0,0,1.09921046358244,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0.311211035399766,0.404132016209064,0,0.302714855289863,0,0,0.936480230490962,0.570471821544449,1.64393548606981,0.23486899728753,0.809364721840658,0.140450806702248,3.47062091133319,0,2.78979609174567,0,0,0,0,0,0,1.10825646193673,0,0,0,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.580969714347592,1.65857688024593,0.756962552626885,0.36497735907583,0,0,0,4.17931135228781,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.77236972004421,0,0.614942192715568,0.171567810298526,0.329250856225877,0,0,0,0,0,1.44331342025273,4.9850074139283,0.352226082707465,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,4.82583996620485,3.4378958300245,9.37739577680376,1.71072446022705,1.7480673759565,2.70308752059526,4.28739648945867,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,1.15825045334063,2.4657158706046,0.716243852959582,0.112085143993527,0,0,0,3.04913549066956,16.9181810014908,5.41302168944387,8.37581326671744,5.10351001322531,0,0,0,8.83378740377807,2.00068208423871,1.35632511849868,0,0,0.157702415033935,0,0.601892199455438,0,2.0694614258501,0,0,0.347534457872331,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0.182091168006717,0.655622074797121,0,0,0,0,0.105551628892876,0,1.19065593693561,0,0,0,0,0,0,0,0,0,2.3080511260475,0.328014645699706,0.325378394664303,2.16386124460217,0,0,0,0,0,2.03008508413456,0.462145851343933,0.460511024178389,1.37836572484531,0.966782203814463,0.725083469571143,0.681813019328807,2.31483292681517,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58189712359363,0.190630193923825,0,2.1396949401696,0,0,0,0.54907405947211,0.471249609382746,0.202182481573316,0,0.421258456238981,0,0,0,0.545999645631943,0,0,0,0,0,0.578775534266688,2.62357900818653,0,0,0,0,0.0982490410131212,0,0,1.26664581178598,0.987884678879706,0,0,0,0.670302275535787,0,3.29503302718727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29027781123349,0,0,0,0,0,1.37402137902306,0,0,0,5.27547857585509,0,0,0,8.99294313594114,0,0,1.61158997199083,0,0,0,0,0,0,6.95903353436409,9.84685914873589,0.333926115068718,0.16480387422676,0,0.398495976502139,0,4.53478946137697,0,0,0,0.0898683511473268,0,0,0.493217028184668,0,0,4.84666373047609,8.16359263824291,9.98068990005971,0,0,0,0,0,0,0.689486746482929,6.12369688104834,2.2571249341328,11.5146380155799,15.9187298985538,0,1.76926815889959,1.47773809476774,5.70402032600329,0,0,1.15425387755696,0.227884111694002,0,0,0,0.31900115973192,0,0,0,4.39544717906069,0,0,0,0,0,0,0,0,0.424059214301822,4.54416143458391,0,1.23840590304675,1.22206028986725,0,0,0,9.57096088325614,1.60515529459758,11.4789578405416,0.182454789215666,0,0,0,1.20990716048664,15.3036380815245,1.70603764996917,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.678923115418936,0.529536760149002,5.64951851951331,0,0,7.91384949448484,0.195551382734803,0,0.213452994739353,0,1.00863292007874,0,6.86379991447858,0,0,0,0,0,0,0,6.60462317580768,6.84526894459965,0,0,0,1.39641200636127,2.06244381610515,2.87149209830726,0.399358000997982,0,4.24025769139558,2.41860500952215,0,3.49487848582361,0,0.0824158583811665,0.337017719270924,1.37798474120648,2.79421995817089,8.74752658790234,7.35498393002508,0.482259445395058,0.962776056180637,1.24632101408756,0,0,6.19645477911852,0,0.236417121897595,0.524545881349981,0,0.537862017998534,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0,0,2.19828350517124,0,5.30060121082357,5.55376927319298,0,0,0.427149650270779,1.10043013569766,0,0.496166021811951,0,0,0,2.72008901684737,1.7548292581589,4.28883807468846,1.31149052283922,0,9.74674997963685,4.75902433117656,6.13435560461849,5.73409195690071,6.76667214374799,8.07253238237985,2.35192679391592,0,6.21761381920756,5.42384133735438,0,0,3.91286777249228,0,0,0,0.757612021100357,1.25783950876288,8.00830099436882,0,0.151230923763239,0.15543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| |||
|short_description=p6@FGD4 | |||
}} |
Latest revision as of 05:06, 18 September 2015
Short description: | p6@FGD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FGD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000266482, ENST00000395740, ENST00000427716, ENST00000473513, ENST00000493087, ENST00000497153, ENST00000551984_5end |
EntrezGene: | FGD4 |
HGNC: | 19125 |
UniProt: | G3XA97E9PNX0Q96M96F8VVF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.84e-08 | 10 |