FFCP PHASE1:Hg19::chr1:43637915..43637998,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10969 | |EntrezGene=10969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15531 | |HGNC=15531 | ||
|TSSclassifier=strong | |||
|UniProt=Q99848,Q6IB29 | |UniProt=Q99848,Q6IB29 | ||
|association_with_transcript=0bp_to_ENST00000236051,ENST00000472982,ENST00000483082,NM_006824,uc001cin.2_5end | |association_with_transcript=0bp_to_ENST00000236051,ENST00000472982,ENST00000483082,NM_006824,uc001cin.2_5end | ||
|cluster_id=chr1:43637915..43637998,- | |||
|description=CAGE_peak_1_at_EBNA1BP2_5end | |description=CAGE_peak_1_at_EBNA1BP2_5end | ||
|id=chr1:43637915..43637998,- | |id=chr1:43637915..43637998,- | ||
|ontology_enrichment_celltype=CL:0000066!8.54e-29!254;CL:0000548!4.22e-24!679;CL:0000004!4.22e-24!679;CL:0000255!4.22e-24!679;CL:0000012!1.66e-23!682;CL:0000220!2.42e-19!246;CL:0002321!2.96e-19!248;CL:0000076!4.48e-18!62;CL:0000003!3.17e-13!722;CL:0000063!3.32e-12!578;CL:0000055!2.69e-10!180;CL:0000222!3.41e-10!119;CL:0000144!1.18e-09!625;CL:0000077!2.81e-08!19;CL:0000223!1.02e-07!59;CL:0002076!1.77e-07!43;CL:0000213!2.44e-07!57;CL:0000215!2.44e-07!57;CL:0000057!6.81e-07!75 | |ontology_enrichment_celltype=CL:0000066!8.54e-29!254;CL:0000548!4.22e-24!679;CL:0000004!4.22e-24!679;CL:0000255!4.22e-24!679;CL:0000012!1.66e-23!682;CL:0000220!2.42e-19!246;CL:0002321!2.96e-19!248;CL:0000076!4.48e-18!62;CL:0000003!3.17e-13!722;CL:0000063!3.32e-12!578;CL:0000055!2.69e-10!180;CL:0000222!3.41e-10!119;CL:0000144!1.18e-09!625;CL:0000077!2.81e-08!19;CL:0000223!1.02e-07!59;CL:0002076!1.77e-07!43;CL:0000213!2.44e-07!57;CL:0000215!2.44e-07!57;CL:0000057!6.81e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000076;4.45e-09;63!CL:0000077;2.86e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.33e-29,253;CL:0002321,4.97e-19,250;CL:0000076,1.34e-17,63;CL:0000222,6.04e-10,121;CL:0000077,2.81e-08,19;CL:0000223,5.68e-08,58;CL:0002076,8.67e-08,42;CL:0000213,2.16e-07,58;CL:0000215,2.16e-07,58;CL:0000057,7.88e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.28e-40!239;DOID:162!7.64e-39!235;DOID:0050687!2.31e-22!143;DOID:305!5.48e-18!106;DOID:0050686!1.25e-16!137;DOID:2531!8.20e-09!51;DOID:0060083!8.20e-09!51;DOID:1240!3.00e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.28e-40,239;DOID:162,7.64e-39,235;DOID:0050687,2.31e-22,143;DOID:305,5.48e-18,106;DOID:0050686,1.25e-16,137;DOID:2531,8.20e-09,51;DOID:0060083,8.20e-09,51;DOID:1240,3.00e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0003104!5.46e-08!238;UBERON:0009142!5.46e-08!238;UBERON:0000490!1.39e-07!138;UBERON:0001637!3.33e-07!42;UBERON:0003509!3.33e-07!42;UBERON:0004572!3.33e-07!42;UBERON:0000487!4.64e-07!22;UBERON:0001981!5.76e-07!60;UBERON:0007500!5.76e-07!60;UBERON:0004537!5.76e-07!60;UBERON:0006965!5.76e-07!60;UBERON:0003102!6.09e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;4.66e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,2.43e-08,148;UBERON:0003102,2.04e-07,99;UBERON:0001637,3.33e-07,42;UBERON:0003509,3.33e-07,42;UBERON:0004572,3.33e-07,42;UBERON:0000487,4.64e-07,22;UBERON:0007500,4.75e-07,59;UBERON:0001981,4.75e-07,59;UBERON:0004537,4.75e-07,59;UBERON:0006965,4.75e-07,59 | |||
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93873821,86.8740614141761 | ||
|short_description=p1@EBNA1BP2 | |short_description=p1@EBNA1BP2 | ||
}} | }} |
Latest revision as of 04:06, 18 September 2015
Short description: | p1@EBNA1BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EBNA1BP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000236051, ENST00000472982, ENST00000483082, NM_006824, uc001cin.2_5end |
EntrezGene: | EBNA1BP2 |
HGNC: | 15531 |
UniProt: | Q99848Q6IB29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.33e-29 | 253 |
embryonic cell | 4.97e-19 | 250 |
squamous epithelial cell | 1.34e-17 | 63 |
mesodermal cell | 6.04e-10 | 121 |
mesothelial cell | 2.81e-08 | 19 |
endodermal cell | 5.68e-08 | 58 |
endo-epithelial cell | 8.67e-08 | 42 |
lining cell | 2.16e-07 | 58 |
barrier cell | 2.16e-07 | 58 |
fibroblast | 7.88e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 2.43e-08 | 148 |
surface structure | 2.04e-07 | 99 |
artery | 3.33e-07 | 42 |
arterial blood vessel | 3.33e-07 | 42 |
arterial system | 3.33e-07 | 42 |
simple squamous epithelium | 4.64e-07 | 22 |
epithelial tube open at both ends | 4.75e-07 | 59 |
blood vessel | 4.75e-07 | 59 |
blood vasculature | 4.75e-07 | 59 |
vascular cord | 4.75e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.28e-40 | 239 |
cancer | 7.64e-39 | 235 |
cell type cancer | 2.31e-22 | 143 |
carcinoma | 5.48e-18 | 106 |
organ system cancer | 1.25e-16 | 137 |
hematologic cancer | 8.20e-09 | 51 |
immune system cancer | 8.20e-09 | 51 |
leukemia | 3.00e-07 | 39 |