FFCP PHASE1:Hg19::chr7:29152388..29152434,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:29152388..29152434,- to FFCP PHASE1:Hg19::chr7:29152388..29152434,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54504 | |EntrezGene=54504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14399 | |HGNC=14399 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLV0 | |UniProt=C9JLV0 | ||
|association_with_transcript=102bp_to_ENST00000448959_5end | |||
|cluster_id=chr7:29152388..29152434,- | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_2_at_CPVL_5end | |||
|id=chr7:29152388..29152434,- | |||
|ontology_enrichment_celltype=CL:0002009!7.90e-35!65;CL:0002194!1.01e-32!63;CL:0000576!1.01e-32!63;CL:0000040!1.01e-32!63;CL:0000559!1.01e-32!63;CL:0002057!7.64e-32!42;CL:0000557!1.68e-30!71;CL:0000860!2.06e-30!45;CL:0000839!6.82e-28!70;CL:0000766!2.78e-27!76;CL:0000763!2.82e-17!112;CL:0000049!2.82e-17!112;CL:0002087!6.32e-12!119;CL:0002031!1.04e-11!124;CL:0000738!9.57e-11!140;CL:0002032!1.38e-07!165;CL:0000837!1.38e-07!165;CL:0000037!3.08e-07!172;CL:0000566!3.08e-07!172;CL:0000039!4.73e-07!7;CL:0000586!4.73e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.28e-17;39!CL:0000234;1.28e-17;39!CL:0002541;3.52e-15;3!CL:0000860;6.28e-15;33!CL:0002057;6.28e-15;33!CL:0000349;4.48e-11;19!CL:0000576;5.39e-11;48!CL:0000039;1.15e-10;7!CL:0000586;1.15e-10;7!CL:0002537;6.34e-09;5!CL:0000766;4.61e-08;69!CL:0000235;6.04e-07;6!CL:0002619;9.60e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.18e-16,59;CL:0000576,2.18e-16,59;CL:0000040,2.18e-16,59;CL:0000559,2.18e-16,59;CL:0000473,2.56e-16,48;CL:0000234,2.56e-16,48;CL:0002009,9.77e-16,61;CL:0002541,3.53e-15,3;CL:0000839,2.80e-14,66;CL:0000557,5.16e-14,67;CL:0000766,8.51e-13,72;CL:0000860,5.67e-12,42;CL:0002057,5.67e-12,42;CL:0000349,4.35e-11,19;CL:0000039,1.41e-10,7;CL:0000586,1.41e-10,7;CL:0002537,6.52e-09,5;CL:0000763,2.23e-07,108;CL:0000049,2.23e-07,108;CL:0000235,8.34e-07,6;CL:0002619,9.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.30e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:170;3.59e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:170,2.96e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.91e-25!80;UBERON:0001474!1.72e-23!86;UBERON:0002390!1.39e-22!102;UBERON:0003061!1.39e-22!102;UBERON:0002193!3.91e-20!112;UBERON:0002405!2.40e-19!115;UBERON:0004765!1.09e-17!101;UBERON:0001434!1.09e-17!101;UBERON:0003081!9.83e-08!216;UBERON:0005631!1.47e-07!14;UBERON:0000158!1.47e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.56e-16;10!UBERON:0000158;1.56e-16;10!UBERON:0003124;3.52e-15;3!UBERON:0000920;3.52e-15;3!UBERON:0000478;5.07e-14;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.51e-20,14;UBERON:0000158,5.51e-20,14;UBERON:0003124,1.79e-16,7;UBERON:0000920,3.53e-15,3;UBERON:0000478,5.04e-14,24;UBERON:0002371,6.15e-12,76;UBERON:0001474,8.29e-11,82;UBERON:0002390,1.03e-09,98;UBERON:0003061,1.03e-09,98;UBERON:0004765,1.55e-09,90;UBERON:0002405,4.06e-09,93;UBERON:0002193,1.80e-08,108;UBERON:0001434,3.07e-08,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0.393364276848904,0,0.619264493264304,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,1.34349284543955,0.647787332037959,4.63636021741536,0.581592955118259,0.755751887377619,1.21292030593908,1.16214518452842,1.6446715520873,0.309706370895104,2.58923153089935,0.512321413058201,0.945928919554341,1.03423704220986,0,1.35426486594342,1.31769637679823,0.272906150057846,0.449446968890169,1.53041946185451,0.641858054152187,1.91801137739712,0.659702600373432,0.598390972864896,1.27867425159808,2.32167390902867,0,0.622822248995575,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,1.10483290796269,0.316462387440884,0,0.212604299965044,0.209658645508376,0.561643155732475,0.901061357049038,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.73217913656106,0.171567810298526,0,0,0.100528972411631,0.740707561268237,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,13.5362583542617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0,0,0,8.11731248108146,10.0967991483097,7.98617825458003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0.347249989866585,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,4.6112780877612,14.2714654611538,76.3791024611717,37.0041345289027,26.8380948667457,92.2150162512238,0,0,0.332423363800313,0,0,0,0,0,0.210998064528027,2.12202650606892,13.0044825719226,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,1.56203764501618,0,0.261177619741208,0.17472666824203,0,0,0.0730893170861856,0,1.74580229679155,0,0,0,0.19871461170299,0,0.782205530939212,0,0,0.39961921916426,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,16.3736780409173,0.858452096273142,0.223171457441873,0.0671834724867263,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,0.687697182986169,0.83088067605837,0.899895566206002,0.77380195455795,0.121499113316049,0,0.0788057072991982,0.209818352539992,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78774068787403,0,0,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0.471797825567689,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.977734268540344,0,0,8.38101422340552,0,0,0,0,0,0.0634158101939068,0,0,0,0,2.29972369751271,0,0,0,0,4.25771376780666,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0,0,22.5508365214163,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0.846774100381858,8.7060610046739,0,0,0,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01988829741982,0.26721740526556,0.18378979906969,0,0.227336094654718,0.267964130156178,0,0.103432995861895,2.77204176471275,0.476128862927481,0.258355639344024,0.124149428591716,0,0.318235791390825,0.202117188958219,0.217716747896961,0,0.942928742204225,0.215166616178029,0.332660356546013,0,0,0,0.0898252021065869,7.03922827210363,0.122241444182866,0,0,0,0 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| ||
|short_description=p2@CPVL | |||
}} | }} |
Latest revision as of 03:46, 18 September 2015
Short description: | p2@CPVL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CPVL_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 102bp_to_ENST00000448959_5end |
EntrezGene: | CPVL |
HGNC: | 14399 |
UniProt: | C9JLV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.18e-16 | 59 |
monocyte | 2.18e-16 | 59 |
monoblast | 2.18e-16 | 59 |
promonocyte | 2.18e-16 | 59 |
defensive cell | 2.56e-16 | 48 |
phagocyte | 2.56e-16 | 48 |
macrophage dendritic cell progenitor | 9.77e-16 | 61 |
chorionic membrane mesenchymal stem cell | 3.53e-15 | 3 |
myeloid lineage restricted progenitor cell | 2.80e-14 | 66 |
granulocyte monocyte progenitor cell | 5.16e-14 | 67 |
myeloid leukocyte | 8.51e-13 | 72 |
classical monocyte | 5.67e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.67e-12 | 42 |
extraembryonic cell | 4.35e-11 | 19 |
germ line cell | 1.41e-10 | 7 |
germ cell | 1.41e-10 | 7 |
amnion mesenchymal stem cell | 6.52e-09 | 5 |
myeloid cell | 2.23e-07 | 108 |
common myeloid progenitor | 2.23e-07 | 108 |
macrophage | 8.34e-07 | 6 |
adult endothelial progenitor cell | 9.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.51e-20 | 14 |
membranous layer | 5.51e-20 | 14 |
chorion | 1.79e-16 | 7 |
egg chorion | 3.53e-15 | 3 |
extraembryonic structure | 5.04e-14 | 24 |
bone marrow | 6.15e-12 | 76 |
bone element | 8.29e-11 | 82 |
hematopoietic system | 1.03e-09 | 98 |
blood island | 1.03e-09 | 98 |
skeletal element | 1.55e-09 | 90 |
immune system | 4.06e-09 | 93 |
hemolymphoid system | 1.80e-08 | 108 |
skeletal system | 3.07e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 2.96e-07 | 6 |