FFCP PHASE1:Hg19::chr1:160765947..160765976,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:160765947..160765976,+ to FFCP PHASE1:Hg19::chr1:160765947..160765976,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4063 | |EntrezGene=4063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6730 | |HGNC=6730 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P2J4,B4E0J5 | |UniProt=Q6P2J4,B4E0J5 | ||
|association_with_transcript=0bp_to_ENST00000263285,ENST00000368039,ENST00000542780_5end | |||
|cluster_id=chr1:160765947..160765976,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_LY9_5end | |||
|id=chr1:160765947..160765976,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.08e-75!140;CL:0002087!2.11e-68!119;CL:0000037!3.93e-65!172;CL:0000566!3.93e-65!172;CL:0002031!4.36e-62!124;CL:0002032!2.99e-59!165;CL:0000837!2.99e-59!165;CL:0000988!9.39e-59!182;CL:0000542!1.16e-37!53;CL:0000051!1.16e-37!53;CL:0000838!6.82e-37!52;CL:0000766!4.00e-28!76;CL:0002009!1.42e-27!65;CL:0002194!1.30e-26!63;CL:0000576!1.30e-26!63;CL:0000040!1.30e-26!63;CL:0000559!1.30e-26!63;CL:0000557!1.41e-26!71;CL:0000839!8.51e-24!70;CL:0000763!3.09e-23!112;CL:0000049!3.09e-23!112;CL:0002057!6.24e-21!42;CL:0000945!8.56e-19!24;CL:0000826!8.56e-19!24;CL:0000860!1.39e-18!45;CL:0000791!1.51e-18!18;CL:0000789!1.51e-18!18;CL:0002420!1.51e-18!18;CL:0002419!1.51e-18!18;CL:0000790!1.51e-18!18;CL:0000084!1.07e-16!25;CL:0000827!1.07e-16!25;CL:0000236!1.25e-13!14;CL:0000625!4.89e-12!11;CL:0000134!6.33e-10!358;CL:0002320!4.49e-09!365;CL:0000451!2.02e-08!10;CL:0000624!3.19e-07!6;CL:0000990!9.62e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.62e-23;53!CL:0000791;7.79e-22;18!CL:0000789;7.79e-22;18!CL:0002419;7.79e-22;18!CL:0002087;1.72e-19;104!CL:0000945;2.06e-19;24!CL:0000084;1.40e-18;25!CL:0000738;2.31e-16;136!CL:0000236;6.36e-15;13!CL:0000576;2.46e-14;48!CL:0000473;3.78e-14;39!CL:0000234;3.78e-14;39!CL:0000625;4.70e-14;11!CL:0000860;2.28e-13;33!CL:0002057;2.28e-13;33!CL:0000766;8.26e-12;69!CL:0000988;1.18e-10;177!CL:0000451;2.07e-08;10!CL:0000624;2.53e-08;6!CL:0000219;3.11e-07;193!CL:0000763;3.27e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.75e-80,136;CL:0002087,1.04e-75,115;CL:0000037,1.38e-71,168;CL:0002031,9.55e-68,120;CL:0000988,7.98e-66,177;CL:0002032,9.75e-65,161;CL:0000837,9.75e-65,161;CL:0000542,7.26e-41,53;CL:0000051,7.26e-41,53;CL:0000838,5.93e-40,52;CL:0002009,8.22e-31,61;CL:0000766,7.89e-30,72;CL:0002194,1.14e-29,59;CL:0000576,1.14e-29,59;CL:0000040,1.14e-29,59;CL:0000559,1.14e-29,59;CL:0000557,6.77e-29,67;CL:0000839,8.14e-26,66;CL:0000763,2.80e-25,108;CL:0000049,2.80e-25,108;CL:0000473,8.32e-24,48;CL:0000234,8.32e-24,48;CL:0000791,7.82e-22,18;CL:0000789,7.82e-22,18;CL:0002420,7.82e-22,18;CL:0002419,7.82e-22,18;CL:0000790,7.82e-22,18;CL:0000945,2.05e-19,24;CL:0000826,2.05e-19,24;CL:0000860,4.11e-19,42;CL:0002057,4.11e-19,42;CL:0000084,1.35e-18,25;CL:0000827,1.35e-18,25;CL:0000236,5.85e-16,14;CL:0000134,2.63e-14,354;CL:0000625,4.66e-14,11;CL:0002320,2.21e-13,361;CL:0000219,3.17e-10,386;CL:0000451,1.91e-08,10;CL:0000624,2.55e-08,6;CL:0000048,6.49e-07,427;CL:0000034,7.82e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000051;2.62e-23;53!CL:0000790;7.79e-22;18!CL:0002057;4.72e-14;42!CL:0000049;1.53e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.64e-35!102;UBERON:0003061!2.64e-35!102;UBERON:0002193!4.12e-32!112;UBERON:0002371!5.01e-23!80;UBERON:0001474!5.91e-20!86;UBERON:0002405!9.12e-19!115;UBERON:0004765!1.18e-14!101;UBERON:0001434!1.18e-14!101;UBERON:0007023!4.14e-13!115;UBERON:0002384!2.77e-08!375;UBERON:0000178!3.33e-08!15;UBERON:0000179!3.33e-08!15;UBERON:0000463!3.33e-08!15;UBERON:0003081!7.38e-08!216;UBERON:0004177!5.27e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.23e-10;15!UBERON:0000179;8.23e-10;15!UBERON:0000463;8.23e-10;15!UBERON:0002390;8.37e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.13e-39,98;UBERON:0003061,3.13e-39,98;UBERON:0002193,3.40e-36,108;UBERON:0002405,1.46e-27,93;UBERON:0002371,1.54e-24,76;UBERON:0001474,1.79e-21,82;UBERON:0004765,4.57e-18,90;UBERON:0001434,1.21e-14,100;UBERON:0002384,1.42e-12,371;UBERON:0003081,2.97e-10,203;UBERON:0000178,8.21e-10,15;UBERON:0000179,8.21e-10,15;UBERON:0000463,8.21e-10,15;UBERON:0004177,4.64e-08,7;UBERON:0005057,4.64e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,13.9836532518751,8.29215953444452,8.02849969399528,11.8009283054671,29.1710342553882,10.6823125088092,0,0,0,19.3668001450754,2.84338464974843,4.9912074686924,9.97191735357379,9.22504458362652,10.199510923645,5.15005590751826,32.065472935879,8.24241816429397,1.45398238779565,12.0920301980419,1.4555043671269,7.67015821788759,22.6142338412004,17.6532631410209,0.575384784644301,6.66017836975662,1.89185783910868,3.44745680736619,12.9096936716765,5.41705946377367,4.32957380947991,22.1053981546855,8.53949240891322,1.83650335422542,17.009238435033,5.11469700639233,0.329851300186716,3.39088217956774,0.852449501065388,0.580418477257168,5.6738522469114,1.86846674698672,3.76872997885115,6.77927793946262,4.12658804939722,4.23779651843358,8.47038562771399,1.26584954976354,2.74631872205524,2.97646019951061,1.46761051855863,1.57260083605093,1.05123824989054,0.48217676009124,2.28010194992999,2.58591680358817,2.00930569141097,54.55883578301,68.2673264077664,64.9341755320395,62.7293427172766,70.4696937183382,76.4420745139463,71.3928462607651,74.4161928537584,118.396297574765,160.315752698266,248.477598281399,26.4342657158052,17.3757654524276,5.53106578027662,77.7003591949641,60.9166682261205,61.6804496998528,5.01559486172034,136.887351986108,129.251250965582,126.637373465142,19.6082404117906,87.2033486125518,92.37963404137,107.238330050946,9.86303161887699,11.9654599755088,9.70183637161689,12.712100818149,21.7352314301289,160.594347904511,132.165169076318,124.397273327922,30.9334505564356,123.780219433421,130.922056728882,164.715819504696,136.983128159362,130.86777422514,124.509217822737,83.1174657309306,101.237409423145,129.92795561444,152.958104820435,133.843863498131,66.1270117777122,40.3834695633096,51.123014570628,0,0,0,0,0,0,0,0,0,0,0.263504357079378,3.1434978119451,0,0,45.7611825053104,47.7115480199992,42.413589405518,68.6852997999385,65.2074198289346,43.4605276555591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,6.18048339180511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5570673104573,13.5722473780758,9.51239438647861,0,0,0,0,0,0,0,0,1.03664057770386,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.8657500628881,20.5925407487172,12.6500363689819,0,0,0,0,0,0,64.3368726522847,42.7556749638182,38.3817083249941,29.0055261992231,0,0,0,0,0,2.24702107184155,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.2371758629891,42.0642691596303,40.8766546387192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.633322905892992,0,0,0,0,0.670302275535787,0,1.69458841398202,0,0,0,0,31.4617517723945,32.8793999071221,44.4324805995847,53.6021494780025,47.7180236779985,36.3145054267922,43.2025149790492,45.2081350487734,0,0,0,27.1272635683549,3.60673032441112,0.853702120180969,12.594675545577,0,0,0,2.27235358192189,0,26.7034574468835,0,0,0,8.18999183028868,2.82519590067467,1.70338495076131,0,2.15068535015921,1.78940886313933,1.50164227540718,10.1601809609061,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,0,0,0,0,3.78571177677032,30.6675146239574,0,0,35.6945935837101,0,0,0,12.2777368854449,24.0689909754118,47.896618469388,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,1.69290568708354,0,0,0,0,0,0.183195186803725,0,29.6360564767636,15.0701046139224,0,0,0,0,0,0,0,0,0,0,8.95735737970654,4.77670848318032,4.27721101453538,0,0,0,0.471807930864739,0.802577647298789,0,6.02100804411698,0,0,0.789168805698781,6.04953580243319,0,3.34888872030986,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,3.4916045935831,0,0,0,0,0.126621591911757,0,0,3.20179492109029,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,1.57732412567589,0.558564802544508,0.916641696046735,0,0,0.429226048136571,0,0.739018197353989,0,0,0,0,0,0,0.508039992394707,0,0.136203406111576,0,0,0,4.27450393947851,2.32140586367385,0.242998226632099,0,0.945668487590378,0.262272940674991,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0.39669780522807,0,0,10.0380167813633,1.57204305099666,7.04206394090232,49.6166021811951,31.4202494717731,14.3715266089457,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72804432375144,2.92302648689399,0.490696182767533,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0.509197589862076,0,0,0,0,0.315446980005013,0,0,0,0.256916900385838,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,2.03067886542995,0,0,0,0,0,0,0.781078098613847,0,0.0634158101939068,0,5.48257766857182,2.48105589194647,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| ||
|short_description=p1@LY9 | |||
}} | }} |
Latest revision as of 03:40, 18 September 2015
Short description: | p1@LY9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LY9_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000263285, ENST00000368039, ENST00000542780_5end |
EntrezGene: | LY9 |
HGNC: | 6730 |
UniProt: | Q6P2J4B4E0J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.13e-39 | 98 |
blood island | 3.13e-39 | 98 |
hemolymphoid system | 3.40e-36 | 108 |
immune system | 1.46e-27 | 93 |
bone marrow | 1.54e-24 | 76 |
bone element | 1.79e-21 | 82 |
skeletal element | 4.57e-18 | 90 |
skeletal system | 1.21e-14 | 100 |
connective tissue | 1.42e-12 | 371 |
lateral plate mesoderm | 2.97e-10 | 203 |
blood | 8.21e-10 | 15 |
haemolymphatic fluid | 8.21e-10 | 15 |
organism substance | 8.21e-10 | 15 |
hemopoietic organ | 4.64e-08 | 7 |
immune organ | 4.64e-08 | 7 |