FFCP PHASE1:Hg19::chr1:160765884..160765903,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4063 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6730 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000474998_5end | |||
|cluster_id=chr1:160765884..160765903,+ | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_3_at_LY9_5end | |||
|id=chr1:160765884..160765903,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.33e-68!119;CL:0000738!5.56e-66!140;CL:0002031!2.04e-57!124;CL:0000037!1.36e-52!172;CL:0000566!1.36e-52!172;CL:0000988!6.21e-48!182;CL:0002032!9.15e-48!165;CL:0000837!9.15e-48!165;CL:0000542!1.54e-42!53;CL:0000051!1.54e-42!53;CL:0000838!1.54e-41!52;CL:0000791!6.41e-23!18;CL:0000789!6.41e-23!18;CL:0002420!6.41e-23!18;CL:0002419!6.41e-23!18;CL:0000790!6.41e-23!18;CL:0002194!7.26e-23!63;CL:0000576!7.26e-23!63;CL:0000040!7.26e-23!63;CL:0000559!7.26e-23!63;CL:0002009!9.28e-22!65;CL:0002057!1.31e-21!42;CL:0000945!3.78e-21!24;CL:0000826!3.78e-21!24;CL:0000766!4.31e-21!76;CL:0000860!1.79e-19!45;CL:0000839!2.78e-19!70;CL:0000557!7.87e-19!71;CL:0000084!1.87e-18!25;CL:0000827!1.87e-18!25;CL:0000236!1.53e-15!14;CL:0000625!9.94e-15!11;CL:0000763!2.09e-13!112;CL:0000049!2.09e-13!112;CL:0000134!4.58e-10!358;CL:0002320!2.12e-09!365;CL:0000624!1.52e-08!6;CL:0000219!3.94e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.53e-33;53!CL:0000791;6.94e-33;18!CL:0000789;6.94e-33;18!CL:0002419;6.94e-33;18!CL:0000945;1.33e-28;24!CL:0000084;4.49e-25;25!CL:0000625;7.06e-21;11!CL:0002087;1.59e-18;104!CL:0000236;1.23e-17;13!CL:0000860;2.45e-15;33!CL:0002057;2.45e-15;33!CL:0000473;8.59e-12;39!CL:0000234;8.59e-12;39!CL:0000624;8.88e-12;6!CL:0000738;5.03e-11;136!CL:0000898;5.45e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.98e-64,115;CL:0000542,8.60e-59,53;CL:0000051,8.60e-59,53;CL:0000838,2.52e-57,52;CL:0000738,1.21e-54,136;CL:0002031,1.33e-52,120;CL:0000037,1.61e-40,168;CL:0002032,1.36e-38,161;CL:0000837,1.36e-38,161;CL:0000988,1.80e-37,177;CL:0000791,5.08e-33,18;CL:0000789,5.08e-33,18;CL:0002420,5.08e-33,18;CL:0002419,5.08e-33,18;CL:0000790,5.08e-33,18;CL:0000945,1.53e-28,24;CL:0000826,1.53e-28,24;CL:0000084,3.62e-25,25;CL:0000827,3.62e-25,25;CL:0000625,6.19e-21,11;CL:0000236,1.26e-19,14;CL:0000860,6.86e-12,42;CL:0002057,6.86e-12,42;CL:0000624,7.78e-12,6;CL:0000473,6.55e-11,48;CL:0000234,6.55e-11,48;CL:0002194,1.02e-10,59;CL:0000576,1.02e-10,59;CL:0000040,1.02e-10,59;CL:0000559,1.02e-10,59;CL:0002009,3.53e-10,61;CL:0000134,1.43e-09,354;CL:0000766,1.73e-09,72;CL:0002320,4.60e-09,361;CL:0000839,5.51e-09,66;CL:0000557,9.06e-09,67;CL:0000219,2.63e-07,386;CL:0000898,5.41e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.53e-33;53!CL:0000790;6.94e-33;18!CL:0002057;6.25e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.72e-29!102;UBERON:0003061!1.72e-29!102;UBERON:0002193!1.13e-27!112;UBERON:0002371!2.64e-15!80;UBERON:0002405!7.49e-14!115;UBERON:0001474!2.15e-13!86;UBERON:0000178!5.93e-11!15;UBERON:0000179!5.93e-11!15;UBERON:0000463!5.93e-11!15;UBERON:0004765!1.04e-09!101;UBERON:0001434!1.04e-09!101;UBERON:0004177!4.13e-09!7;UBERON:0002384!6.56e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.78e-16;15!UBERON:0000179;9.78e-16;15!UBERON:0000463;9.78e-16;15!UBERON:0002390;2.01e-10;32!UBERON:0002193;2.92e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.85e-21,98;UBERON:0003061,2.85e-21,98;UBERON:0002193,9.46e-21,108;UBERON:0000178,5.62e-16,15;UBERON:0000179,5.62e-16,15;UBERON:0000463,5.62e-16,15;UBERON:0002405,3.30e-11,93;UBERON:0004177,5.54e-10,7;UBERON:0005057,5.54e-10,7;UBERON:0002370,2.14e-08,4;UBERON:0005058,2.14e-08,4;UBERON:0009113,2.14e-08,4;UBERON:0003295,2.14e-08,4;UBERON:0005562,2.14e-08,4;UBERON:0002384,2.24e-08,371;UBERON:0002371,4.25e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.14940825229924,1.02324015707783,0.393364276848904,1.53531759238885,0.309632246632152,0,0,0,4.7254992353984,2.13253848731132,0,0.553995408531877,0,0,0,1.94336199611388,0.515151135268373,0.145398238779565,3.77875943688809,0.727752183563449,2.09186133215116,8.63452564845834,7.12324653058738,0.575384784644301,1.2808035326455,0,2.41321976515633,6.45484683583826,8.12558919566051,2.63539275359647,10.643339852256,4.26974620445661,0.612167784741805,5.1348644332175,3.83602275479425,0,0.199463657621632,0.426224750532694,0.580418477257168,1.70215567407342,1.24564449799115,2.00998932205395,1.5644487552606,3.47502151528187,0.605399502633369,3.31449872388808,0.632924774881769,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0,0,7.03984977845291,2.73069305631066,4.44754626931777,3.41384178053206,6.00593980554019,2.29900975981793,4.62731410949403,2.86216126360609,13.6611112586268,25.8384363323213,37.8450495843977,1.32171328579026,5.04457706683382,0,4.32761494250433,1.96505381374582,4.11202997999018,0,8.14805666583976,6.62826928028627,5.84480185223734,0.668462741311041,2.3568472597987,5.09527957542329,5.1452734115353,0.25618263945135,0.260118695119756,0.164437904603676,0,0.289803085735052,9.63862660553393,8.02622484269139,5.22677619024884,1.24640276967323,5.3650869104269,6.52892146416997,12.1449452169361,7.96413535810242,11.0684187155591,3.8018081777935,6.02300476311091,6.2713439465665,8.74515085866421,7.34009481336452,4.92676798152628,1.41124720257313,1.06976078313403,2.46201486600758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62273696827342,0.696518949197069,0.930705723632056,2.38490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,5.60425719967636,1.37921532141349,2.15627574859517,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,1.94142780736755,2.56146138728266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,2.29391162142713,1.70894156152249,2.85878130549347,5.75907182320672,5.18778648954174,3.7802200606668,3.96562588147135,0,0,0,1.67222857613147,0,0,0.318852545457645,0,0,0.211673582723883,0,0,0.456469358066384,0,0,0,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,2.48655523978033,0,0,7.2620035222031,0,0,0,0,7.59554223404389,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,7.15353087370155,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60181118851542,0.314408610199332,0.414239055347196,2.97699613087171,4.54506753365272,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,10.947228817799,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.437119121007915,0,0,0,0,0,0,0,4.79317981697253,3.54518383854674,0.299823467774787,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,1.0661699095049,0,2.0668451147522,3.16581042908875,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,4.8493478170503,1.00411087549747,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,2.01273793591026,3.8468219076388 | |||
|short_description=p3@LY9 | |||
}} |
Latest revision as of 03:38, 18 September 2015
Short description: | p3@LY9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LY9_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | 0bp_to_ENST00000474998_5end |
EntrezGene: | LY9 |
HGNC: | 6730 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.85e-21 | 98 |
blood island | 2.85e-21 | 98 |
hemolymphoid system | 9.46e-21 | 108 |
blood | 5.62e-16 | 15 |
haemolymphatic fluid | 5.62e-16 | 15 |
organism substance | 5.62e-16 | 15 |
immune system | 3.30e-11 | 93 |
hemopoietic organ | 5.54e-10 | 7 |
immune organ | 5.54e-10 | 7 |
thymus | 2.14e-08 | 4 |
hemolymphoid system gland | 2.14e-08 | 4 |
thymic region | 2.14e-08 | 4 |
pharyngeal gland | 2.14e-08 | 4 |
thymus primordium | 2.14e-08 | 4 |
connective tissue | 2.24e-08 | 371 |
bone marrow | 4.25e-07 | 76 |