FFCP PHASE1:Hg19::chr21:34144157..34144175,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94104 | |EntrezGene=94104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13579 | |HGNC=13579 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5B6,Q8N6E6 | |UniProt=Q9Y5B6,Q8N6E6 | ||
|association_with_transcript=0bp_to_ENST00000331923,NM_013329,NM_016631,NR_027873,uc002yqn.2,uc002yqo.2,uc002yqp.2,uc002yqr.2_5end | |association_with_transcript=0bp_to_ENST00000331923,NM_013329,NM_016631,NR_027873,uc002yqn.2,uc002yqo.2,uc002yqp.2,uc002yqr.2_5end | ||
|cluster_id=chr21:34144157..34144175,- | |||
|description=CAGE_peak_3_at_GCFC1_5end | |description=CAGE_peak_3_at_GCFC1_5end | ||
|id=chr21:34144157..34144175,- | |id=chr21:34144157..34144175,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.57e-08;7!CL:0000586;2.57e-08;7!CL:0002319;4.81e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.43e-08,7;CL:0000586,2.43e-08,7;CL:0002319,2.72e-07,25;CL:0000047,5.91e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.81e-22!235;DOID:14566!2.14e-22!239;DOID:0050687!5.79e-13!143;DOID:305!1.20e-11!106;DOID:0050686!2.55e-11!137;DOID:2531!7.32e-11!51;DOID:0060083!7.32e-11!51;DOID:1240!3.28e-08!39;DOID:8692!4.40e-07!31 | |ontology_enrichment_disease=DOID:162!1.81e-22!235;DOID:14566!2.14e-22!239;DOID:0050687!5.79e-13!143;DOID:305!1.20e-11!106;DOID:0050686!2.55e-11!137;DOID:2531!7.32e-11!51;DOID:0060083!7.32e-11!51;DOID:1240!3.28e-08!39;DOID:8692!4.40e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.89e-07;22!DOID:2994;3.89e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.70e-21,235;DOID:14566,9.70e-21,239;DOID:0050686,1.25e-11,137;DOID:0050687,2.44e-11,143;DOID:305,8.77e-11,106;DOID:2531,1.65e-10,51;DOID:0060083,1.65e-10,51;DOID:3095,1.62e-07,22;DOID:2994,1.62e-07,22;DOID:1240,3.78e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@GCFC1 | |short_description=p3@GCFC1 | ||
}} | }} |
Latest revision as of 03:37, 18 September 2015
Short description: | p3@GCFC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GCFC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000331923, NM_013329, NM_016631, NR_027873, uc002yqn.2, uc002yqo.2, uc002yqp.2, uc002yqr.2_5end |
EntrezGene: | GCFC1 |
HGNC: | 13579 |
UniProt: | Q9Y5B6Q8N6E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.43e-08 | 7 |
germ cell | 2.43e-08 | 7 |
neural cell | 2.72e-07 | 25 |
neuronal stem cell | 5.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.70e-21 | 235 |
disease of cellular proliferation | 9.70e-21 | 239 |
organ system cancer | 1.25e-11 | 137 |
cell type cancer | 2.44e-11 | 143 |
carcinoma | 8.77e-11 | 106 |
hematologic cancer | 1.65e-10 | 51 |
immune system cancer | 1.65e-10 | 51 |
germ cell and embryonal cancer | 1.62e-07 | 22 |
germ cell cancer | 1.62e-07 | 22 |
leukemia | 3.78e-07 | 39 |