FFCP PHASE1:Hg19::chr15:53083268..53083283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3175 | |EntrezGene=3175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8138 | |HGNC=8138 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000561401_5end | |association_with_transcript=0bp_to_ENST00000561401_5end | ||
|cluster_id=chr15:53083268..53083283,- | |||
|description=CAGE_peak_5_at_ONECUT1_5end | |description=CAGE_peak_5_at_ONECUT1_5end | ||
|id=chr15:53083268..53083283,- | |id=chr15:53083268..53083283,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;6.30e-21;2!CL:0000242;6.30e-21;2!CL:0000312;3.35e-09;5!CL:0000240;7.01e-08;6!CL:0000311;7.01e-08;6!CL:0000079;7.01e-08;6!CL:0000237;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.96e-21,2;CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.62e-41;1!CL:0000357;7.01e-08;6!CL:0000114;7.01e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;2.44e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.37e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000988!5.74e-13!3;UBERON:0002298!8.99e-13!8;UBERON:0003076!1.59e-12!15;UBERON:0003057!1.59e-12!15;UBERON:0001049!6.47e-12!57;UBERON:0005068!6.47e-12!57;UBERON:0006241!6.47e-12!57;UBERON:0007135!6.47e-12!57;UBERON:0007023!2.96e-10!115;UBERON:0002148!2.53e-09!2;UBERON:0009662!2.53e-09!2;UBERON:0000073!5.03e-09!94;UBERON:0001016!5.03e-09!94;UBERON:0005743!5.12e-09!86;UBERON:0001017!1.98e-08!82;UBERON:0004733!2.10e-08!12;UBERON:0002028!2.10e-08!12;UBERON:0007277!2.10e-08!12;UBERON:0002616!2.62e-08!59;UBERON:0003075!6.48e-08!86;UBERON:0007284!6.48e-08!86;UBERON:0000955!7.42e-08!69;UBERON:0006238!7.42e-08!69;UBERON:0004732!9.89e-08!13;UBERON:0002346!2.03e-07!90 | |ontology_enrichment_uberon=UBERON:0000988!5.74e-13!3;UBERON:0002298!8.99e-13!8;UBERON:0003076!1.59e-12!15;UBERON:0003057!1.59e-12!15;UBERON:0001049!6.47e-12!57;UBERON:0005068!6.47e-12!57;UBERON:0006241!6.47e-12!57;UBERON:0007135!6.47e-12!57;UBERON:0007023!2.96e-10!115;UBERON:0002148!2.53e-09!2;UBERON:0009662!2.53e-09!2;UBERON:0000073!5.03e-09!94;UBERON:0001016!5.03e-09!94;UBERON:0005743!5.12e-09!86;UBERON:0001017!1.98e-08!82;UBERON:0004733!2.10e-08!12;UBERON:0002028!2.10e-08!12;UBERON:0007277!2.10e-08!12;UBERON:0002616!2.62e-08!59;UBERON:0003075!6.48e-08!86;UBERON:0007284!6.48e-08!86;UBERON:0000955!7.42e-08!69;UBERON:0006238!7.42e-08!69;UBERON:0004732!9.89e-08!13;UBERON:0002346!2.03e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.22e-14;3!UBERON:0002075;7.10e-10;18!UBERON:0002294;5.08e-07;7!UBERON:0001173;5.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.22e-14,3;UBERON:0006242,1.22e-14,3;UBERON:0002075,7.10e-10,18 | |||
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| ||
|short_description=p5@ONECUT1 | |short_description=p5@ONECUT1 | ||
}} | }} |
Latest revision as of 03:17, 18 September 2015
Short description: | p5@ONECUT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ONECUT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000561401_5end |
EntrezGene: | ONECUT1 |
HGNC: | 8138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.96e-21 | 2 |
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.22e-14 | 3 |
gall bladder primordium | 1.22e-14 | 3 |
viscus | 7.10e-10 | 18 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.37e-12 | 14 |