FFCP PHASE1:Hg19::chr7:2854860..2854866,-: Difference between revisions
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|id=chr7:2854860..2854866,-
|short_description=p22@GNA12
|description=CAGE_peak_22_at_GNA12_5end
|association_with_transcript=25bp_to_ENST00000447791_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2768 | |EntrezGene=2768 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4380 | |HGNC=4380 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2Y7 | |UniProt=C9J2Y7 | ||
|association_with_transcript=25bp_to_ENST00000447791_5end | |||
|cluster_id=chr7:2854860..2854866,- | |||
|description=CAGE_peak_22_at_GNA12_5end | |||
|id=chr7:2854860..2854866,- | |||
|ontology_enrichment_celltype=CL:0000039!1.53e-34!7;CL:0000586!1.53e-34!7;CL:0000708!7.34e-16!3;CL:0002541!1.57e-15!3;CL:0002575!1.53e-11!2;CL:0000540!1.62e-08!6;CL:0000031!1.62e-08!6;CL:0000404!1.62e-08!6;CL:0002590!9.23e-08!3;CL:0002379!8.81e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002379;1.78e-15;1!CL:0000540;1.57e-10;6!CL:0000404;1.57e-10;6!CL:0002569;2.19e-10;6!CL:0002575;2.15e-08;2!CL:0000349;2.77e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,8.63e-16,1;CL:0000540,1.43e-10,6;CL:0000031,1.43e-10,6;CL:0000404,1.43e-10,6;CL:0002569,1.73e-10,6;CL:0002575,1.86e-08,2;CL:0000047,3.77e-08,8;CL:0000349,2.65e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.43e-16;1!CL:0000031;1.57e-10;6 | |||
|ontology_enrichment_disease=DOID:3095!1.62e-13!22;DOID:2994!1.62e-13!22;DOID:3620!8.81e-07!1;DOID:3565!8.81e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3620;1.78e-15;1!DOID:3565;1.78e-15;1!DOID:4231;2.15e-08;2!DOID:1907;2.15e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,8.63e-16,1;DOID:3565,8.63e-16,1;DOID:4231,2.15e-08,2;DOID:1907,2.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003210!7.34e-16!3;UBERON:0000476!1.57e-15!3;UBERON:0000920!1.57e-15!3;UBERON:0003124!7.40e-12!7;UBERON:0000473!1.47e-10!8;UBERON:0005284!1.12e-09!5;UBERON:0000478!1.29e-09!24;UBERON:0005631!7.59e-09!14;UBERON:0000158!7.59e-09!14;UBERON:0003135!1.07e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;2.19e-10;6!UBERON:0000478;8.79e-10;24!UBERON:0003104;4.95e-09;7!UBERON:0009142;4.95e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,1.73e-10,6;UBERON:0000478,8.40e-10,24;UBERON:0003124,4.21e-09,7 | |||
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|short_description=p22@GNA12 | |||
}} | }} |
Latest revision as of 03:17, 18 September 2015
Short description: | p22@GNA12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_GNA12_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000447791_5end |
EntrezGene: | GNA12 |
HGNC: | 4380 |
UniProt: | C9J2Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 8.63e-16 | 1 |
neuron | 1.43e-10 | 6 |
neuroblast | 1.43e-10 | 6 |
electrically signaling cell | 1.43e-10 | 6 |
mesenchymal stem cell of umbilical cord | 1.73e-10 | 6 |
central nervous system pericyte | 1.86e-08 | 2 |
neuronal stem cell | 3.77e-08 | 8 |
extraembryonic cell | 2.65e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 1.73e-10 | 6 |
extraembryonic structure | 8.40e-10 | 24 |
chorion | 4.21e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 8.63e-16 | 1 |
meningioma | 8.63e-16 | 1 |
histiocytoma | 2.15e-08 | 2 |
malignant fibroxanthoma | 2.15e-08 | 2 |