FFCP PHASE1:Hg19::chr19:41281060..41281082,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:41281060..41281082,+
|short_description=p3@MIA
|description=CAGE_peak_3_at_MIA_5end
|association_with_transcript=0bp_to_NM_001202553_5end
|EntrezGene=819...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8190 | |EntrezGene=8190 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7076 | |HGNC=7076 | ||
|TSSclassifier=strong | |||
|UniProt=Q16674 | |UniProt=Q16674 | ||
|association_with_transcript=0bp_to_NM_001202553_5end | |||
|cluster_id=chr19:41281060..41281082,+ | |||
|description=CAGE_peak_3_at_MIA_5end | |||
|id=chr19:41281060..41281082,+ | |||
|ontology_enrichment_celltype=CL:0000667!1.30e-07!6;CL:0000058!1.30e-07!6;CL:0000138!1.30e-07!6;CL:0002327!3.80e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002327;7.96e-25;4!CL:0002379;1.13e-11;1!CL:0000138;3.39e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,8.64e-25,4;CL:0002379,7.76e-12,1;CL:0000058,3.39e-08,6;CL:0000138,3.39e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!8.22e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.56e-22;2!DOID:3493;6.01e-22;2!DOID:3620;1.13e-11;1!DOID:3565;1.13e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.30e-22,2;DOID:3493,6.01e-22,2;DOID:3620,7.76e-12,1;DOID:3565,7.76e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001911!3.80e-07!4;UBERON:0005333!3.80e-07!4;UBERON:0008425!3.80e-07!4;UBERON:0005311!3.80e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.96e-25;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,8.64e-25,4;UBERON:0005333,8.64e-25,4;UBERON:0008425,8.64e-25,4;UBERON:0005311,8.64e-25,4;UBERON:0000076,1.04e-12,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,6.36228757640879,9.24606253575008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,4.65704318054811,3.19697332365358,7.66765358330422,0,0,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,1.60633120630454,1.04421949505455,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0.126373159256976,0.150323419414493,0,0,1.323967823502,1.56966459203613,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0.529536760149002,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79318464064088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70112264379108,2.28372266835974,1.6468607378872,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0,1.96278473107013,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,1.27595303699816,3.53561982448581,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0.952257725854961,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.430333232356058,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,6.36228757640879,9.24606253575008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,4.65704318054811,3.19697332365358,7.66765358330422,0,0,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,1.60633120630454,1.04421949505455,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0.126373159256976,0.150323419414493,0,0,1.323967823502,1.56966459203613,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0.529536760149002,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79318464064088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70112264379108,2.28372266835974,1.6468607378872,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0,1.96278473107013,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,1.27595303699816,3.53561982448581,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0.952257725854961,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.430333232356058,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@MIA | |||
}} | }} |
Latest revision as of 03:02, 18 September 2015
Short description: | p3@MIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001202553_5end |
EntrezGene: | MIA |
HGNC: | 7076 |
UniProt: | Q16674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 8.64e-25 | 4 |
meningothelial cell | 7.76e-12 | 1 |
chondroblast | 3.39e-08 | 6 |
chondrocyte | 3.39e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 8.64e-25 | 4 |
mammary bud | 8.64e-25 | 4 |
mammary ridge | 8.64e-25 | 4 |
mammary placode | 8.64e-25 | 4 |
external ectoderm | 1.04e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.30e-22 | 2 |
signet ring cell adenocarcinoma | 6.01e-22 | 2 |
central nervous system cancer | 7.76e-12 | 1 |
meningioma | 7.76e-12 | 1 |