FFCP PHASE1:Hg19::chr2:68694341..68694353,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:68694341..68694353,- to FFCP PHASE1:Hg19::chr2:68694341..68694353,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=554251 | |EntrezGene=554251 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33857 | |HGNC=33857 | ||
|TSSclassifier=strong | |||
|UniProt=Q5FWF7 | |UniProt=Q5FWF7 | ||
|association_with_transcript=36bp_to_ENST00000377957,NM_001024680,uc002seo.2_5end | |||
|cluster_id=chr2:68694341..68694353,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_FBXO48_5end | |||
|id=chr2:68694341..68694353,- | |||
|ontology_enrichment_celltype=CL:0000738!3.50e-38!140;CL:0000037!1.99e-34!172;CL:0000566!1.99e-34!172;CL:0000988!1.35e-32!182;CL:0000860!1.40e-31!45;CL:0002057!1.62e-29!42;CL:0002032!2.04e-29!165;CL:0000837!2.04e-29!165;CL:0002031!4.69e-29!124;CL:0000766!1.72e-28!76;CL:0002087!3.16e-28!119;CL:0000557!3.00e-27!71;CL:0002009!4.05e-25!65;CL:0000839!6.65e-25!70;CL:0000763!3.21e-24!112;CL:0000049!3.21e-24!112;CL:0002194!2.07e-23!63;CL:0000576!2.07e-23!63;CL:0000040!2.07e-23!63;CL:0000559!2.07e-23!63;CL:0000134!5.59e-12!358;CL:0000219!1.68e-11!390;CL:0002320!4.10e-11!365;CL:0000063!1.81e-07!578;CL:0000034!2.88e-07!444;CL:0000048!5.25e-07!430;CL:0000723!9.21e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.87e-63;33!CL:0002057;2.87e-63;33!CL:0000473;1.18e-47;39!CL:0000234;1.18e-47;39!CL:0000576;6.25e-29;48!CL:0000766;3.57e-23;69!CL:0000763;2.92e-11;100!CL:0002087;1.12e-10;104!CL:0000771;2.79e-10;2!CL:0000738;2.59e-08;136!CL:0000988;9.61e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.46e-57,42;CL:0002057,2.46e-57,42;CL:0000473,9.70e-54,48;CL:0000234,9.70e-54,48;CL:0000557,2.34e-46,67;CL:0000766,4.45e-46,72;CL:0002009,6.15e-44,61;CL:0000839,1.87e-43,66;CL:0002194,8.53e-42,59;CL:0000576,8.53e-42,59;CL:0000040,8.53e-42,59;CL:0000559,8.53e-42,59;CL:0000738,1.05e-37,136;CL:0002031,1.56e-31,120;CL:0000763,5.09e-31,108;CL:0000049,5.09e-31,108;CL:0000037,6.29e-31,168;CL:0000988,7.95e-31,177;CL:0002087,2.00e-26,115;CL:0002032,3.31e-25,161;CL:0000837,3.31e-25,161;CL:0000134,2.74e-13,354;CL:0002320,7.22e-13,361;CL:0000219,2.87e-12,386;CL:0000771,2.67e-10,2;CL:0000048,1.43e-09,427;CL:0000723,2.54e-09,433;CL:0000034,5.36e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.13e-41;42!CL:0000049;3.64e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.94e-24!80;UBERON:0002390!3.28e-23!102;UBERON:0003061!3.28e-23!102;UBERON:0001474!3.17e-22!86;UBERON:0002193!6.26e-20!112;UBERON:0004765!8.22e-18!101;UBERON:0001434!8.22e-18!101;UBERON:0002405!1.22e-17!115;UBERON:0002384!2.12e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.02e-43,76;UBERON:0001474,1.24e-39,82;UBERON:0002390,2.90e-37,98;UBERON:0003061,2.90e-37,98;UBERON:0002405,7.37e-37,93;UBERON:0004765,1.48e-35,90;UBERON:0002193,3.39e-33,108;UBERON:0001434,2.29e-31,100;UBERON:0002204,3.47e-16,167;UBERON:0003081,1.86e-14,203;UBERON:0002384,2.71e-12,371;UBERON:0000926,6.48e-07,315;UBERON:0004120,6.48e-07,315;UBERON:0006603,6.48e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0.309868802321207,0.284338464974843,1.17440175733939,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0,0.581592955118259,0.755751887377619,0.485168122375632,1.16214518452842,1.23350366406548,3.40677007984614,0,1.7931249457037,2.83778675866302,2.75796544589295,3.22742341791913,6.77132432971709,1.31769637679823,1.36453075028923,3.37085226667627,2.44867113896722,3.53021929783703,2.55734850319616,0.659702600373432,0.997318288108159,1.27867425159808,3.77272010217159,2.26954089876456,4.9825779919646,3.01498398308092,0,1.95469960234605,1.21079900526674,6.2607198117886,10.7597211729901,0.422510572623884,1.27562579979026,0.419317291016752,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,3.84057200309856,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0.393419540227666,0.393010762749165,0.822405995998037,0,0.651844533267181,0,0,0,1.76763544484902,0,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,1.87208137048455,0.724122019413995,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.953962497221368,1.14398982156026,1.11437250398869,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,7.75560528296651,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0.468642863667593,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.985326475791887,0,1.65862492432618,0.432359860250884,1.8936365013957,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.862510299438069,1.15508732651774,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.431428401637234,0.640365346820666,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0.144269212976445,0.426851060090485,0.159426272728822,0,0,0.211673582723883,0,0,0.684704037099577,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0.445773537109913,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0,0.369254416383208,0,0.359473404589307,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.217294743844016,1.27600463892768,0,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0.432777279484182,0,0,0,1.48260564340311,0.123563938946503,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,1.35291077473043,0.103688191397247,0,0,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0.293977192243133,0.522355239482415,0,0,0.290268993867255,0.584714536689484,0.164230914106418,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,2.32991899054908,0.0787831823072236,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0,0,0.137539436597234,0.415440338029185,0.449947783103001,4.6428117273477,0,0.335434687599266,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0,0,0.544017803369474,0.7520696820681,0.612691153526923,2.29510841496863,0,0,0,0,0,0,0,0.415045904808692,0.249960815924213,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0.211312123358627,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.247871528518004,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,0,0,0,0.40341013740704,0,0.261906694481422,0.163771917510097,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p3@FBXO48 | |||
}} | }} |
Latest revision as of 02:55, 18 September 2015
Short description: | p3@FBXO48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FBXO48_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 36bp_to_ENST00000377957, NM_001024680, uc002seo.2_5end |
EntrezGene: | FBXO48 |
HGNC: | 33857 |
UniProt: | Q5FWF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.46e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.46e-57 | 42 |
defensive cell | 9.70e-54 | 48 |
phagocyte | 9.70e-54 | 48 |
granulocyte monocyte progenitor cell | 2.34e-46 | 67 |
myeloid leukocyte | 4.45e-46 | 72 |
macrophage dendritic cell progenitor | 6.15e-44 | 61 |
myeloid lineage restricted progenitor cell | 1.87e-43 | 66 |
monopoietic cell | 8.53e-42 | 59 |
monocyte | 8.53e-42 | 59 |
monoblast | 8.53e-42 | 59 |
promonocyte | 8.53e-42 | 59 |
leukocyte | 1.05e-37 | 136 |
hematopoietic lineage restricted progenitor cell | 1.56e-31 | 120 |
myeloid cell | 5.09e-31 | 108 |
common myeloid progenitor | 5.09e-31 | 108 |
hematopoietic stem cell | 6.29e-31 | 168 |
hematopoietic cell | 7.95e-31 | 177 |
nongranular leukocyte | 2.00e-26 | 115 |
hematopoietic oligopotent progenitor cell | 3.31e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.31e-25 | 161 |
mesenchymal cell | 2.74e-13 | 354 |
connective tissue cell | 7.22e-13 | 361 |
motile cell | 2.87e-12 | 386 |
eosinophil | 2.67e-10 | 2 |
multi fate stem cell | 1.43e-09 | 427 |
somatic stem cell | 2.54e-09 | 433 |
stem cell | 5.36e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.02e-43 | 76 |
bone element | 1.24e-39 | 82 |
hematopoietic system | 2.90e-37 | 98 |
blood island | 2.90e-37 | 98 |
immune system | 7.37e-37 | 93 |
skeletal element | 1.48e-35 | 90 |
hemolymphoid system | 3.39e-33 | 108 |
skeletal system | 2.29e-31 | 100 |
musculoskeletal system | 3.47e-16 | 167 |
lateral plate mesoderm | 1.86e-14 | 203 |
connective tissue | 2.71e-12 | 371 |
mesoderm | 6.48e-07 | 315 |
mesoderm-derived structure | 6.48e-07 | 315 |
presumptive mesoderm | 6.48e-07 | 315 |