FFCP PHASE1:Hg19::chr19:41256742..41256761,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:41256742..41256761,+ to FFCP PHASE1:Hg19::chr19:41256742..41256761,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6626 | |EntrezGene=6626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11151 | |HGNC=11151 | ||
|TSSclassifier=strong | |||
|UniProt=P09012 | |UniProt=P09012 | ||
|association_with_transcript=0bp_to_ENST00000243563,NM_004596_5end | |||
|cluster_id=chr19:41256742..41256761,+ | |||
|description=CAGE_peak_7_at_SNRPA_5end | |||
|id=chr19:41256742..41256761,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.82e-10!254;CL:0002319!3.93e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.24e-08;25!CL:0000095;8.73e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.39e-09,25;CL:0000066,9.86e-08,253;CL:0000095,2.25e-07,17;CL:0000123,2.25e-07,17;CL:0000333,3.15e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.80e-13!235;DOID:14566!2.28e-12!239;DOID:0050687!6.20e-09!143;DOID:305!2.12e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.61e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p7@SNRPA | |||
}} | }} |
Latest revision as of 02:52, 18 September 2015
Short description: | p7@SNRPA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SNRPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000243563, NM_004596_5end |
EntrezGene: | SNRPA |
HGNC: | 11151 |
UniProt: | P09012 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.39e-09 | 25 |
epithelial cell | 9.86e-08 | 253 |
neuron associated cell | 2.25e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.25e-07 | 17 |
migratory neural crest cell | 3.15e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.61e-07 | 235 |