FFCP PHASE1:Hg19::chr3:38032245..38032254,+: Difference between revisions
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|id=chr3:38032245..38032254,+
|short_description=p9@VILL
|description=CAGE_peak_9_at_VILL_5end
|association_with_transcript=28bp_to_ENST00000416303_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50853 | |EntrezGene=50853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30906 | |HGNC=30906 | ||
|TSSclassifier=strong | |||
|UniProt=C9JUR8 | |UniProt=C9JUR8 | ||
|association_with_transcript=28bp_to_ENST00000416303_5end | |||
|cluster_id=chr3:38032245..38032254,+ | |||
|coexpression_cluster_id=C3765 | |||
|description=CAGE_peak_9_at_VILL_5end | |||
|id=chr3:38032245..38032254,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.83e-10!43;CL:1000415!6.08e-10!2;CL:0002537!4.01e-09!5;CL:0000223!3.78e-08!59;CL:0002368!4.70e-08!13;CL:0002178!6.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.50e-12;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.59e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.21e-15;1 | |||
|ontology_enrichment_disease=DOID:3493!3.52e-10!2;DOID:299!5.84e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3111;2.21e-15;1!DOID:3603;2.21e-15;1!DOID:3493;2.40e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.66e-15,1;DOID:3603,3.66e-15,1;DOID:3493,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!3.27e-22!7;UBERON:0001173!3.27e-22!7;UBERON:0004912!3.27e-22!7;UBERON:0005409!6.11e-16!35;UBERON:0002110!2.48e-14!3;UBERON:0006242!2.48e-14!3;UBERON:0004119!3.02e-14!169;UBERON:0000925!3.02e-14!169;UBERON:0006595!3.02e-14!169;UBERON:0000160!7.87e-12!27;UBERON:0002394!3.30e-10!4;UBERON:0003928!3.30e-10!4;UBERON:0001007!6.43e-10!155;UBERON:0001555!6.43e-10!155;UBERON:0007026!6.43e-10!155;UBERON:0004921!3.31e-09!129;UBERON:0004185!3.31e-09!129;UBERON:0002108!1.79e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;8.15e-26;4!UBERON:0005409;6.87e-22;22!UBERON:0000160;1.04e-19;17!UBERON:0004921;2.11e-13;33!UBERON:0000305;3.17e-09;7!UBERON:0001155;2.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,6.05e-26,4;UBERON:0000160,9.04e-20,17;UBERON:0005409,2.04e-19,25;UBERON:0000305,3.30e-09,7;UBERON:0004871,3.63e-08,8;UBERON:0001155,2.29e-07,9 | |||
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| ||
|short_description=p9@VILL | |||
}} | }} |
Latest revision as of 02:49, 18 September 2015
Short description: | p9@VILL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_VILL_5end |
Coexpression cluster: | C3765_amniotic_colon_Alveolar_duodenum_small_mucinous_stomach |
Association with transcript: | 28bp_to_ENST00000416303_5end |
EntrezGene: | VILL |
HGNC: | 30906 |
UniProt: | C9JUR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.59e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
small intestine | 6.05e-26 | 4 |
intestine | 9.04e-20 | 17 |
gastrointestinal system | 2.04e-19 | 25 |
amnion | 3.30e-09 | 7 |
somatic layer of lateral plate mesoderm | 3.63e-08 | 8 |
colon | 2.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.66e-15 | 1 |
mucinous cystadenocarcinoma | 3.66e-15 | 1 |
signet ring cell adenocarcinoma | 2.48e-08 | 2 |