FFCP PHASE1:Hg19::chr3:38032216..38032225,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50853 | |EntrezGene=50853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30906 | |HGNC=30906 | ||
|TSSclassifier=strong | |||
|UniProt=C9JUR8 | |UniProt=C9JUR8 | ||
|association_with_transcript=0bp_to_ENST00000416303_5end | |association_with_transcript=0bp_to_ENST00000416303_5end | ||
|cluster_id=chr3:38032216..38032225,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_11_at_VILL_5end | |description=CAGE_peak_11_at_VILL_5end | ||
|id=chr3:38032216..38032225,+ | |id=chr3:38032216..38032225,+ | ||
|ontology_enrichment_celltype=CL:0002178!1.48e-10!3;CL:0002537!5.44e-07!5 | |ontology_enrichment_celltype=CL:0002178!1.48e-10!3;CL:0002537!5.44e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.33e-32;5!CL:0000244;3.26e-11;4!CL:0000731;3.26e-11;4!CL:0000349;2.12e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.05e-32,5;CL:0000244,3.42e-11,4;CL:0000731,3.42e-11,4;CL:0000349,1.99e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!3.72e-15!2;DOID:299!4.98e-07!25 | |ontology_enrichment_disease=DOID:3493!3.72e-15!2;DOID:299!4.98e-07!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.04e-11!35;UBERON:0002110!9.56e-11!3;UBERON:0006242!9.56e-11!3;UBERON:0002294!9.00e-10!7;UBERON:0001173!9.00e-10!7;UBERON:0004912!9.00e-10!7;UBERON:0000945!8.79e-09!8;UBERON:0010039!8.79e-09!8;UBERON:0005631!1.24e-08!14;UBERON:0000158!1.24e-08!14;UBERON:0000997!3.28e-08!1;UBERON:0005056!3.28e-08!1;UBERON:0004119!1.10e-07!169;UBERON:0000925!1.10e-07!169;UBERON:0006595!1.10e-07!169 | |ontology_enrichment_uberon=UBERON:0005409!1.04e-11!35;UBERON:0002110!9.56e-11!3;UBERON:0006242!9.56e-11!3;UBERON:0002294!9.00e-10!7;UBERON:0001173!9.00e-10!7;UBERON:0004912!9.00e-10!7;UBERON:0000945!8.79e-09!8;UBERON:0010039!8.79e-09!8;UBERON:0005631!1.24e-08!14;UBERON:0000158!1.24e-08!14;UBERON:0000997!3.28e-08!1;UBERON:0005056!3.28e-08!1;UBERON:0004119!1.10e-07!169;UBERON:0000925!1.10e-07!169;UBERON:0006595!1.10e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.21e-23;7!UBERON:0005631;6.65e-17;10!UBERON:0000158;6.65e-17;10!UBERON:0000945;3.10e-09;5!UBERON:0010039;3.10e-09;5!UBERON:0000365;3.10e-09;5!UBERON:0005910;6.55e-08;6!UBERON:0000478;1.21e-07;24!UBERON:0001871;5.86e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.02e-23,7;UBERON:0004871,6.64e-21,8;UBERON:0005631,2.00e-12,14;UBERON:0000158,2.00e-12,14;UBERON:0000365,3.22e-09,5;UBERON:0005910,6.78e-08,6;UBERON:0000478,1.15e-07,24;UBERON:0001871,6.39e-07,6 | |||
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|short_description=p11@VILL | |short_description=p11@VILL | ||
}} | }} |
Latest revision as of 02:48, 18 September 2015
Short description: | p11@VILL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_VILL_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000416303_5end |
EntrezGene: | VILL |
HGNC: | 30906 |
UniProt: | C9JUR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.05e-32 | 5 |
transitional epithelial cell | 3.42e-11 | 4 |
urothelial cell | 3.42e-11 | 4 |
extraembryonic cell | 1.99e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.02e-23 | 7 |
somatic layer of lateral plate mesoderm | 6.64e-21 | 8 |
extraembryonic membrane | 2.00e-12 | 14 |
membranous layer | 2.00e-12 | 14 |
urothelium | 3.22e-09 | 5 |
transitional epithelium | 6.78e-08 | 6 |
extraembryonic structure | 1.15e-07 | 24 |
temporal lobe | 6.39e-07 | 6 |