FFCP PHASE1:Hg19::chr12:30907838..30907850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65981 | |EntrezGene=65981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21259 | |HGNC=21259 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7T6 | |UniProt=F5H7T6 | ||
|association_with_transcript=-16bp_to_ENST00000540436_5end | |association_with_transcript=-16bp_to_ENST00000540436_5end | ||
|cluster_id=chr12:30907838..30907850,- | |||
|description=CAGE_peak_5_at_CAPRIN2_5end | |description=CAGE_peak_5_at_CAPRIN2_5end | ||
|id=chr12:30907838..30907850,- | |id=chr12:30907838..30907850,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.39e-07;3!CL:0000067;2.39e-07;3!CL:0005012;2.39e-07;3!CL:0002304;2.39e-07;3 | |ontology_enrichment_celltype_v019=CL:0000064;2.39e-07;3!CL:0000067;2.39e-07;3!CL:0005012;2.39e-07;3!CL:0002304;2.39e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.47e-08,3;CL:0000067,8.47e-08,3;CL:0005012,8.47e-08,3;CL:0002304,8.47e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.06e-17!94;UBERON:0001016!1.06e-17!94;UBERON:0001017!1.15e-16!82;UBERON:0005743!5.82e-15!86;UBERON:0001049!7.00e-15!57;UBERON:0005068!7.00e-15!57;UBERON:0006241!7.00e-15!57;UBERON:0007135!7.00e-15!57;UBERON:0000955!1.26e-14!69;UBERON:0006238!1.26e-14!69;UBERON:0002616!3.83e-14!59;UBERON:0003075!7.33e-13!86;UBERON:0007284!7.33e-13!86;UBERON:0002346!1.47e-12!90;UBERON:0002780!1.19e-11!41;UBERON:0001890!1.19e-11!41;UBERON:0006240!1.19e-11!41;UBERON:0004121!3.56e-11!169;UBERON:0000924!4.17e-11!173;UBERON:0006601!4.17e-11!173;UBERON:0003080!5.67e-11!42;UBERON:0000025!1.36e-10!194;UBERON:0007023!6.92e-10!115;UBERON:0002020!2.21e-09!34;UBERON:0003528!2.21e-09!34;UBERON:0000153!4.88e-09!129;UBERON:0007811!4.88e-09!129;UBERON:0000033!7.71e-09!123;UBERON:0001893!8.53e-09!34;UBERON:0004111!1.41e-08!241;UBERON:0002791!2.00e-08!33;UBERON:0001869!2.43e-08!32;UBERON:0000477!2.70e-08!286;UBERON:0003056!5.25e-08!61 | |ontology_enrichment_uberon=UBERON:0000073!1.06e-17!94;UBERON:0001016!1.06e-17!94;UBERON:0001017!1.15e-16!82;UBERON:0005743!5.82e-15!86;UBERON:0001049!7.00e-15!57;UBERON:0005068!7.00e-15!57;UBERON:0006241!7.00e-15!57;UBERON:0007135!7.00e-15!57;UBERON:0000955!1.26e-14!69;UBERON:0006238!1.26e-14!69;UBERON:0002616!3.83e-14!59;UBERON:0003075!7.33e-13!86;UBERON:0007284!7.33e-13!86;UBERON:0002346!1.47e-12!90;UBERON:0002780!1.19e-11!41;UBERON:0001890!1.19e-11!41;UBERON:0006240!1.19e-11!41;UBERON:0004121!3.56e-11!169;UBERON:0000924!4.17e-11!173;UBERON:0006601!4.17e-11!173;UBERON:0003080!5.67e-11!42;UBERON:0000025!1.36e-10!194;UBERON:0007023!6.92e-10!115;UBERON:0002020!2.21e-09!34;UBERON:0003528!2.21e-09!34;UBERON:0000153!4.88e-09!129;UBERON:0007811!4.88e-09!129;UBERON:0000033!7.71e-09!123;UBERON:0001893!8.53e-09!34;UBERON:0004111!1.41e-08!241;UBERON:0002791!2.00e-08!33;UBERON:0001869!2.43e-08!32;UBERON:0000477!2.70e-08!286;UBERON:0003056!5.25e-08!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001264;6.63e-09;10!UBERON:0000988;9.77e-08;3!UBERON:0001778;2.39e-07;3!UBERON:0002114;2.39e-07;2!UBERON:0001775;2.39e-07;3!UBERON:0001017;2.83e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0001264;6.63e-09;10!UBERON:0000988;9.77e-08;3!UBERON:0001778;2.39e-07;3!UBERON:0002114;2.39e-07;2!UBERON:0001775;2.39e-07;3!UBERON:0001017;2.83e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.27e-14,89;UBERON:0001017,1.66e-11,81;UBERON:0000955,3.27e-11,68;UBERON:0006238,3.27e-11,68;UBERON:0003075,1.48e-10,82;UBERON:0007284,1.48e-10,82;UBERON:0000073,2.94e-10,53;UBERON:0002616,2.94e-10,53;UBERON:0002346,8.77e-10,86;UBERON:0001049,1.79e-09,56;UBERON:0005068,1.79e-09,56;UBERON:0006241,1.79e-09,56;UBERON:0007135,1.79e-09,56;UBERON:0001264,4.44e-09,10;UBERON:0003056,2.26e-08,61;UBERON:0001778,8.47e-08,3;UBERON:0001775,8.47e-08,3;UBERON:0000988,1.02e-07,3;UBERON:0004121,1.60e-07,171;UBERON:0000924,1.60e-07,171;UBERON:0006601,1.60e-07,171;UBERON:0010314,1.67e-07,132;UBERON:0002114,1.86e-07,2;UBERON:0002780,3.72e-07,41;UBERON:0001890,3.72e-07,41;UBERON:0003080,3.72e-07,41;UBERON:0006240,3.72e-07,41;UBERON:0010371,4.35e-07,104 | |||
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| ||
|short_description=p5@CAPRIN2 | |short_description=p5@CAPRIN2 | ||
}} | }} |
Latest revision as of 02:48, 18 September 2015
Short description: | p5@CAPRIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAPRIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000540436_5end |
EntrezGene: | CAPRIN2 |
HGNC: | 21259 |
UniProt: | F5H7T6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.47e-08 | 3 |
ciliated epithelial cell | 8.47e-08 | 3 |
multi-ciliated epithelial cell | 8.47e-08 | 3 |
non-pigmented ciliary epithelial cell | 8.47e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.27e-14 | 89 |
central nervous system | 1.66e-11 | 81 |
brain | 3.27e-11 | 68 |
future brain | 3.27e-11 | 68 |
neural plate | 1.48e-10 | 82 |
presumptive neural plate | 1.48e-10 | 82 |
regional part of nervous system | 2.94e-10 | 53 |
regional part of brain | 2.94e-10 | 53 |
neurectoderm | 8.77e-10 | 86 |
neural tube | 1.79e-09 | 56 |
neural rod | 1.79e-09 | 56 |
future spinal cord | 1.79e-09 | 56 |
neural keel | 1.79e-09 | 56 |
pancreas | 4.44e-09 | 10 |
pre-chordal neural plate | 2.26e-08 | 61 |
ciliary epithelium | 8.47e-08 | 3 |
ciliary body | 8.47e-08 | 3 |
pons | 1.02e-07 | 3 |
ectoderm-derived structure | 1.60e-07 | 171 |
ectoderm | 1.60e-07 | 171 |
presumptive ectoderm | 1.60e-07 | 171 |
structure with developmental contribution from neural crest | 1.67e-07 | 132 |
duodenum | 1.86e-07 | 2 |
regional part of forebrain | 3.72e-07 | 41 |
forebrain | 3.72e-07 | 41 |
anterior neural tube | 3.72e-07 | 41 |
future forebrain | 3.72e-07 | 41 |
ecto-epithelium | 4.35e-07 | 104 |