FFCP PHASE1:Hg19::chr2:170655809..170655813,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11316 | |||
|TSSclassifier=strong | |||
|UniProt=P05455 | |||
|association_with_transcript=20bp_to_ENST00000409333,uc002ufm.2_5end | |||
|cluster_id=chr2:170655809..170655813,+ | |||
|description=CAGE_peak_4_at_SSB_5end | |||
|id=chr2:170655809..170655813,+ | |||
|ontology_enrichment_celltype=CL:0000542!9.11e-28!53;CL:0000051!9.11e-28!53;CL:0000838!4.00e-27!52;CL:0000084!1.57e-14!25;CL:0000827!1.57e-14!25;CL:0000003!1.57e-13!722;CL:0000945!4.89e-12!24;CL:0000826!4.89e-12!24;CL:0000791!9.72e-12!18;CL:0000789!9.72e-12!18;CL:0002420!9.72e-12!18;CL:0002419!9.72e-12!18;CL:0000790!9.72e-12!18;CL:0000236!8.28e-09!14;CL:0000625!1.04e-07!11;CL:0002087!1.88e-07!119;CL:0000063!4.06e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.42e-18;53!CL:0000084;3.90e-16;25!CL:0000945;1.44e-13;24!CL:0000791;4.16e-13;18!CL:0000789;4.16e-13;18!CL:0002419;4.16e-13;18!CL:0000236;4.44e-09;13!CL:0000625;1.46e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.08e-31,53;CL:0000051,4.08e-31,53;CL:0000838,2.12e-30,52;CL:0000084,5.87e-16,25;CL:0000827,5.87e-16,25;CL:0000945,1.30e-13,24;CL:0000826,1.30e-13,24;CL:0000791,7.38e-13,18;CL:0000789,7.38e-13,18;CL:0002420,7.38e-13,18;CL:0002419,7.38e-13,18;CL:0000790,7.38e-13,18;CL:0000236,1.32e-09,14;CL:0002087,1.56e-08,115;CL:0000625,2.18e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.42e-18;53!CL:0000790;4.16e-13;18 | |||
|ontology_enrichment_disease=DOID:14566!4.02e-14!239;DOID:162!2.00e-13!235;DOID:305!2.09e-08!106;DOID:0050686!5.81e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.68e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.38e-13,239;DOID:162,1.26e-12,235;DOID:0050686,1.85e-07,137;DOID:305,2.52e-07,106;DOID:0060058,6.36e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@SSB | |||
}} |
Latest revision as of 02:42, 18 September 2015
Short description: | p4@SSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SSB_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000409333, uc002ufm.2_5end |
EntrezGene: | SSB |
HGNC: | 11316 |
UniProt: | P05455 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.08e-31 | 53 |
common lymphoid progenitor | 4.08e-31 | 53 |
lymphoid lineage restricted progenitor cell | 2.12e-30 | 52 |
T cell | 5.87e-16 | 25 |
pro-T cell | 5.87e-16 | 25 |
lymphocyte of B lineage | 1.30e-13 | 24 |
pro-B cell | 1.30e-13 | 24 |
mature alpha-beta T cell | 7.38e-13 | 18 |
alpha-beta T cell | 7.38e-13 | 18 |
immature T cell | 7.38e-13 | 18 |
mature T cell | 7.38e-13 | 18 |
immature alpha-beta T cell | 7.38e-13 | 18 |
B cell | 1.32e-09 | 14 |
nongranular leukocyte | 1.56e-08 | 115 |
CD8-positive, alpha-beta T cell | 2.18e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.38e-13 | 239 |
cancer | 1.26e-12 | 235 |
organ system cancer | 1.85e-07 | 137 |
carcinoma | 2.52e-07 | 106 |
lymphoma | 6.36e-07 | 10 |