FFCP PHASE1:Hg19::chr13:80055462..80055478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54602 | |EntrezGene=54602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18537 | |HGNC=18537 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-109bp_to_ENST00000487865_5end | |association_with_transcript=-109bp_to_ENST00000487865_5end | ||
|cluster_id=chr13:80055462..80055478,+ | |||
|coexpression_cluster_id=C2272 | |||
|description=CAGE_peak_6_at_NDFIP2_5end | |description=CAGE_peak_6_at_NDFIP2_5end | ||
|id=chr13:80055462..80055478,+ | |id=chr13:80055462..80055478,+ | ||
|ontology_enrichment_celltype=CL:0002251!1.81e-09!21;CL:0002076!3.03e-09!43;CL:0000223!6.66e-09!59 | |ontology_enrichment_celltype=CL:0002251!1.81e-09!21;CL:0002076!3.03e-09!43;CL:0000223!6.66e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002251;3.66e-10;20!CL:0002076;1.49e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,3.76e-10,20;CL:0002076,3.02e-09,42;CL:0000223,6.16e-09,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.62e-09!143;DOID:305!3.08e-08!106 | |ontology_enrichment_disease=DOID:0050687!6.62e-09!143;DOID:305!3.08e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.58e-07,106;DOID:0050687,7.56e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000481!8.27e-22!347;UBERON:0004121!2.08e-19!169;UBERON:0000924!2.71e-18!173;UBERON:0006601!2.71e-18!173;UBERON:0000475!5.66e-18!365;UBERON:0000062!2.93e-17!511;UBERON:0000033!3.64e-16!123;UBERON:0000153!4.49e-16!129;UBERON:0007811!4.49e-16!129;UBERON:0000064!7.41e-16!219;UBERON:0001017!1.41e-15!82;UBERON:0004119!1.46e-15!169;UBERON:0000925!1.46e-15!169;UBERON:0006595!1.46e-15!169;UBERON:0002780!1.47e-15!41;UBERON:0001890!1.47e-15!41;UBERON:0006240!1.47e-15!41;UBERON:0001049!4.49e-15!57;UBERON:0005068!4.49e-15!57;UBERON:0006241!4.49e-15!57;UBERON:0007135!4.49e-15!57;UBERON:0005743!7.37e-15!86;UBERON:0007023!7.50e-15!115;UBERON:0003080!1.54e-14!42;UBERON:0000073!1.92e-14!94;UBERON:0001016!1.92e-14!94;UBERON:0002616!3.08e-14!59;UBERON:0000955!4.63e-14!69;UBERON:0006238!4.63e-14!69;UBERON:0001007!8.33e-14!155;UBERON:0001555!8.33e-14!155;UBERON:0007026!8.33e-14!155;UBERON:0001893!2.49e-13!34;UBERON:0002791!1.03e-12!33;UBERON:0001869!1.42e-12!32;UBERON:0002020!1.99e-12!34;UBERON:0003528!1.99e-12!34;UBERON:0000467!2.98e-11!625;UBERON:0000468!3.10e-11!659;UBERON:0000480!3.69e-11!626;UBERON:0002050!5.82e-11!605;UBERON:0005423!5.82e-11!605;UBERON:0000922!6.23e-11!612;UBERON:0004921!6.41e-11!129;UBERON:0004185!6.41e-11!129;UBERON:0000923!8.45e-11!604;UBERON:0005291!8.45e-11!604;UBERON:0006598!8.45e-11!604;UBERON:0002532!8.45e-11!604;UBERON:0002619!2.35e-10!22;UBERON:0003075!3.01e-10!86;UBERON:0007284!3.01e-10!86;UBERON:0003056!6.97e-10!61;UBERON:0000956!8.41e-10!25;UBERON:0000203!8.41e-10!25;UBERON:0001950!1.11e-09!20;UBERON:0002346!3.52e-09!90;UBERON:0000077!9.10e-09!130;UBERON:0000477!3.31e-08!286;UBERON:0000160!4.40e-08!27;UBERON:0005409!4.44e-08!35;UBERON:0000483!1.18e-07!309;UBERON:0003104!1.40e-07!238;UBERON:0009142!1.40e-07!238;UBERON:0000119!2.81e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.51e-12;34!UBERON:0002780;6.43e-12;41!UBERON:0001890;6.43e-12;41!UBERON:0001869;9.94e-12;32!UBERON:0002791;2.68e-11;32!UBERON:0003528;5.82e-11;34!UBERON:0002020;5.82e-11;34!UBERON:0002619;7.28e-11;22!UBERON:0001950;3.29e-10;20!UBERON:0000956;5.36e-10;25!UBERON:0000203;5.36e-10;25!UBERON:0000073;4.47e-09;53!UBERON:0002616;4.47e-09;53!UBERON:0001017;6.78e-08;75!UBERON:0000955;1.33e-07;68!UBERON:0000344;3.37e-07;20!UBERON:0005409;5.49e-07;22 | |||
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| ||
|short_description=p6@NDFIP2 | |short_description=p6@NDFIP2 | ||
}} | }} |
Latest revision as of 02:29, 18 September 2015
Short description: | p6@NDFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NDFIP2_5end |
Coexpression cluster: | C2272_amniotic_chorionic_oral_glassy_colon_epidermoid_Mallassezderived |
Association with transcript: | -109bp_to_ENST00000487865_5end |
EntrezGene: | NDFIP2 |
HGNC: | 18537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 3.76e-10 | 20 |
endo-epithelial cell | 3.02e-09 | 42 |
endodermal cell | 6.16e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.58e-07 | 106 |
cell type cancer | 7.56e-07 | 143 |