FFCP PHASE1:Hg19::chr1:160493058..160493069,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114836 | |EntrezGene=114836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21392 | |HGNC=21392 | ||
|TSSclassifier=strong | |||
|UniProt=B2R8X8,Q96DU3,B4E1U5,Q5TAS6 | |UniProt=B2R8X8,Q96DU3,B4E1U5,Q5TAS6 | ||
|association_with_transcript=-6bp_to_ENST00000368059,NM_001184714,NM_001184715,NM_001184716,NM_052931_5end | |association_with_transcript=-6bp_to_ENST00000368059,NM_001184714,NM_001184715,NM_001184716,NM_052931_5end | ||
|cluster_id=chr1:160493058..160493069,- | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_2_at_SLAMF6_5end | |description=CAGE_peak_2_at_SLAMF6_5end | ||
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|ontology_enrichment_celltype=CL:0000542!3.10e-48!53;CL:0000051!3.10e-48!53;CL:0000838!7.81e-47!52;CL:0000037!1.09e-35!172;CL:0000566!1.09e-35!172;CL:0002032!3.00e-34!165;CL:0000837!3.00e-34!165;CL:0002087!2.46e-33!119;CL:0000738!3.86e-33!140;CL:0000988!1.59e-32!182;CL:0002031!3.51e-27!124;CL:0000945!3.45e-23!24;CL:0000826!3.45e-23!24;CL:0000791!9.17e-22!18;CL:0000789!9.17e-22!18;CL:0002420!9.17e-22!18;CL:0002419!9.17e-22!18;CL:0000790!9.17e-22!18;CL:0000084!1.74e-20!25;CL:0000827!1.74e-20!25;CL:0000625!1.14e-18!11;CL:0000236!1.12e-13!14;CL:0000134!4.11e-08!358;CL:0002320!1.29e-07!365 | |ontology_enrichment_celltype=CL:0000542!3.10e-48!53;CL:0000051!3.10e-48!53;CL:0000838!7.81e-47!52;CL:0000037!1.09e-35!172;CL:0000566!1.09e-35!172;CL:0002032!3.00e-34!165;CL:0000837!3.00e-34!165;CL:0002087!2.46e-33!119;CL:0000738!3.86e-33!140;CL:0000988!1.59e-32!182;CL:0002031!3.51e-27!124;CL:0000945!3.45e-23!24;CL:0000826!3.45e-23!24;CL:0000791!9.17e-22!18;CL:0000789!9.17e-22!18;CL:0002420!9.17e-22!18;CL:0002419!9.17e-22!18;CL:0000790!9.17e-22!18;CL:0000084!1.74e-20!25;CL:0000827!1.74e-20!25;CL:0000625!1.14e-18!11;CL:0000236!1.12e-13!14;CL:0000134!4.11e-08!358;CL:0002320!1.29e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.34e-32;24!CL:0000625;2.88e-27;11!CL:0000542;9.99e-26;53!CL:0000791;1.15e-19;18!CL:0000789;1.15e-19;18!CL:0002419;1.15e-19;18!CL:0000084;1.96e-16;25!CL:0000236;2.89e-10;13!CL:0002087;1.52e-07;104 | |ontology_enrichment_celltype_v019=CL:0000945;1.34e-32;24!CL:0000625;2.88e-27;11!CL:0000542;9.99e-26;53!CL:0000791;1.15e-19;18!CL:0000789;1.15e-19;18!CL:0002419;1.15e-19;18!CL:0000084;1.96e-16;25!CL:0000236;2.89e-10;13!CL:0002087;1.52e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.11e-47,52;CL:0000542,1.19e-46,53;CL:0000051,1.19e-46,53;CL:0000945,9.81e-33,24;CL:0000826,9.81e-33,24;CL:0000625,2.62e-27,11;CL:0002087,1.53e-22,115;CL:0002031,2.63e-21,120;CL:0000791,9.99e-20,18;CL:0000789,9.99e-20,18;CL:0002420,9.99e-20,18;CL:0002419,9.99e-20,18;CL:0000790,9.99e-20,18;CL:0000738,1.63e-19,136;CL:0002032,1.40e-16,161;CL:0000837,1.40e-16,161;CL:0000084,1.72e-16,25;CL:0000827,1.72e-16,25;CL:0000037,1.40e-15,168;CL:0000988,2.08e-14,177;CL:0000236,7.26e-13,14;CL:0000785,1.30e-08,2;CL:0000955,1.30e-08,2;CL:0000818,1.30e-08,2;CL:0000954,1.30e-08,2;CL:0000816,1.30e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;9.99e-26;53!CL:0000790;1.15e-19;18!CL:0000954;9.71e-09;2 | |ontology_enrichment_development_v019=CL:0000051;9.99e-26;53!CL:0000790;1.15e-19;18!CL:0000954;9.71e-09;2 | ||
|ontology_enrichment_disease=DOID:2531!8.26e-12!51;DOID:0060083!8.26e-12!51;DOID:1240!1.93e-08!39 | |ontology_enrichment_disease=DOID:2531!8.26e-12!51;DOID:0060083!8.26e-12!51;DOID:1240!1.93e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.68e-09;10 | |ontology_enrichment_disease_v019=DOID:0060058;1.68e-09;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.88e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.15e-12!15;UBERON:0000179!7.15e-12!15;UBERON:0000463!7.15e-12!15;UBERON:0004177!7.14e-09!7;UBERON:0002390!1.71e-07!102;UBERON:0003061!1.71e-07!102;UBERON:0002193!1.88e-07!112;UBERON:0002384!2.54e-07!375 | |ontology_enrichment_uberon=UBERON:0000178!7.15e-12!15;UBERON:0000179!7.15e-12!15;UBERON:0000463!7.15e-12!15;UBERON:0004177!7.14e-09!7;UBERON:0002390!1.71e-07!102;UBERON:0003061!1.71e-07!102;UBERON:0002193!1.88e-07!112;UBERON:0002384!2.54e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;2.08e-07;5!UBERON:0005057;2.08e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0004177;2.08e-07;5!UBERON:0005057;2.08e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.63e-09,7;UBERON:0005057,6.63e-09,7 | |||
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| ||
|short_description=p2@SLAMF6 | |short_description=p2@SLAMF6 | ||
}} | }} |
Latest revision as of 02:28, 18 September 2015
Short description: | p2@SLAMF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLAMF6_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -6bp_to_ENST00000368059, NM_001184714, NM_001184715, NM_001184716, NM_052931_5end |
EntrezGene: | SLAMF6 |
HGNC: | 21392 |
UniProt: | B2R8X8Q96DU3B4E1U5Q5TAS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.11e-47 | 52 |
lymphocyte | 1.19e-46 | 53 |
common lymphoid progenitor | 1.19e-46 | 53 |
lymphocyte of B lineage | 9.81e-33 | 24 |
pro-B cell | 9.81e-33 | 24 |
CD8-positive, alpha-beta T cell | 2.62e-27 | 11 |
nongranular leukocyte | 1.53e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.63e-21 | 120 |
mature alpha-beta T cell | 9.99e-20 | 18 |
alpha-beta T cell | 9.99e-20 | 18 |
immature T cell | 9.99e-20 | 18 |
mature T cell | 9.99e-20 | 18 |
immature alpha-beta T cell | 9.99e-20 | 18 |
leukocyte | 1.63e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.40e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-16 | 161 |
T cell | 1.72e-16 | 25 |
pro-T cell | 1.72e-16 | 25 |
hematopoietic stem cell | 1.40e-15 | 168 |
hematopoietic cell | 2.08e-14 | 177 |
B cell | 7.26e-13 | 14 |
mature B cell | 1.30e-08 | 2 |
pre-B-II cell | 1.30e-08 | 2 |
transitional stage B cell | 1.30e-08 | 2 |
small pre-B-II cell | 1.30e-08 | 2 |
immature B cell | 1.30e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 6.63e-09 | 7 |
immune organ | 6.63e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.88e-09 | 10 |