FFCP PHASE1:Hg19::chr19:41103063..41103144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8425 | |EntrezGene=8425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6717 | |HGNC=6717 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2S1,B3KXY6 | |UniProt=Q8N2S1,B3KXY6 | ||
|association_with_transcript=0bp_to_ENST00000308370,NM_001042544,uc002ooh.1_5end | |association_with_transcript=0bp_to_ENST00000308370,NM_001042544,uc002ooh.1_5end | ||
|cluster_id=chr19:41103063..41103144,+ | |||
|description=CAGE_peak_4_at_LTBP4_5end | |description=CAGE_peak_4_at_LTBP4_5end | ||
|id=chr19:41103063..41103144,+ | |id=chr19:41103063..41103144,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.43e-17!180;CL:0000222!5.25e-12!119;CL:0000183!9.99e-12!59;CL:0000393!1.95e-11!60;CL:0000211!1.95e-11!60;CL:0002321!1.18e-10!248;CL:0000187!3.20e-10!54;CL:0000220!3.36e-10!246;CL:0000680!1.81e-09!57;CL:0000056!1.81e-09!57;CL:0000355!1.81e-09!57;CL:0000192!2.00e-09!42;CL:0000514!2.00e-09!42;CL:1000497!5.48e-07!18;CL:0002518!5.48e-07!18 | |ontology_enrichment_celltype=CL:0000055!2.43e-17!180;CL:0000222!5.25e-12!119;CL:0000183!9.99e-12!59;CL:0000393!1.95e-11!60;CL:0000211!1.95e-11!60;CL:0002321!1.18e-10!248;CL:0000187!3.20e-10!54;CL:0000220!3.36e-10!246;CL:0000680!1.81e-09!57;CL:0000056!1.81e-09!57;CL:0000355!1.81e-09!57;CL:0000192!2.00e-09!42;CL:0000514!2.00e-09!42;CL:1000497!5.48e-07!18;CL:0002518!5.48e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.87e-07;10!CL:1000494;2.87e-07;10!CL:0000192;3.92e-07;43!CL:0000393;4.90e-07;61!CL:0000211;4.90e-07;61!CL:1000497;7.71e-07;17!CL:0002518;7.71e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.24e-12,61;CL:0000211,1.24e-12,61;CL:0000187,2.92e-11,55;CL:0000222,1.24e-10,121;CL:0000192,5.16e-10,43;CL:0000514,5.16e-10,43;CL:0000680,8.25e-10,58;CL:0000056,8.25e-10,58;CL:0000355,8.25e-10,58;CL:0002321,1.61e-08,250;CL:1000507,2.83e-07,10;CL:1000494,2.83e-07,10;CL:1000497,8.10e-07,17;CL:0002518,8.10e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;3.92e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.91e-19!347;UBERON:0003104!5.31e-17!238;UBERON:0009142!5.31e-17!238;UBERON:0000468!1.38e-16!659;UBERON:0000922!2.02e-16!612;UBERON:0000119!1.24e-15!312;UBERON:0000483!2.53e-15!309;UBERON:0005256!9.00e-15!143;UBERON:0002050!3.07e-14!605;UBERON:0005423!3.07e-14!605;UBERON:0000923!7.97e-14!604;UBERON:0005291!7.97e-14!604;UBERON:0006598!7.97e-14!604;UBERON:0002532!7.97e-14!604;UBERON:0002100!3.30e-13!216;UBERON:0000467!5.28e-13!625;UBERON:0000480!9.36e-13!626;UBERON:0003914!9.70e-13!118;UBERON:0000490!1.41e-12!138;UBERON:0002049!2.08e-12!79;UBERON:0007798!2.08e-12!79;UBERON:0000475!1.72e-10!365;UBERON:0001008!1.93e-10!45;UBERON:0006554!2.21e-10!44;UBERON:0000486!3.24e-10!82;UBERON:0001981!4.06e-10!60;UBERON:0007500!4.06e-10!60;UBERON:0004537!4.06e-10!60;UBERON:0006965!4.06e-10!60;UBERON:0000914!4.14e-10!83;UBERON:0002329!4.14e-10!83;UBERON:0003077!4.14e-10!83;UBERON:0003059!4.14e-10!83;UBERON:0007282!4.14e-10!83;UBERON:0009618!4.14e-10!83;UBERON:0007285!4.14e-10!83;UBERON:0002385!9.28e-10!63;UBERON:0001015!9.28e-10!63;UBERON:0000383!9.28e-10!63;UBERON:0001134!1.17e-09!61;UBERON:0002036!1.17e-09!61;UBERON:0003082!1.17e-09!61;UBERON:0004290!1.21e-09!70;UBERON:0003064!1.31e-09!37;UBERON:0000477!2.04e-09!286;UBERON:0003103!2.33e-09!69;UBERON:0000926!4.43e-09!448;UBERON:0004120!4.43e-09!448;UBERON:0006603!4.43e-09!448;UBERON:0000055!4.46e-09!69;UBERON:0005177!9.48e-09!107;UBERON:0004535!2.19e-08!110;UBERON:0004872!2.31e-08!84;UBERON:0001009!2.64e-08!113;UBERON:0001637!2.99e-08!42;UBERON:0003509!2.99e-08!42;UBERON:0004572!2.99e-08!42;UBERON:0002113!5.74e-08!27;UBERON:0003918!5.74e-08!27;UBERON:0005095!5.74e-08!27;UBERON:0007687!5.74e-08!27;UBERON:0000489!8.50e-08!32;UBERON:0004876!3.90e-07!20;UBERON:0004111!4.55e-07!241;UBERON:0000080!8.01e-07!18;UBERON:0002120!8.01e-07!18;UBERON:0004875!8.01e-07!18;UBERON:0005721!8.01e-07!18;UBERON:0005754!8.01e-07!18;UBERON:0007297!8.01e-07!18;UBERON:0001032!9.08e-07!24;UBERON:0004456!9.08e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.46e-07;30!UBERON:0001008;1.46e-07;30!UBERON:0004211;2.87e-07;10!UBERON:0009773;2.87e-07;10!UBERON:0001231;2.87e-07;10!UBERON:0004810;2.87e-07;10!UBERON:0003914;3.80e-07;74!UBERON:0002113;5.56e-07;24!UBERON:0011143;5.56e-07;24!UBERON:0007625;6.48e-07;11 | |||
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| ||
|short_description=p4@LTBP4 | |short_description=p4@LTBP4 | ||
}} | }} |
Latest revision as of 02:28, 18 September 2015
Short description: | p4@LTBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LTBP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308370, NM_001042544, uc002ooh.1_5end |
EntrezGene: | LTBP4 |
HGNC: | 6717 |
UniProt: | Q8N2S1B3KXY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.24e-12 | 61 |
electrically active cell | 1.24e-12 | 61 |
muscle cell | 2.92e-11 | 55 |
mesodermal cell | 1.24e-10 | 121 |
smooth muscle cell | 5.16e-10 | 43 |
smooth muscle myoblast | 5.16e-10 | 43 |
muscle precursor cell | 8.25e-10 | 58 |
myoblast | 8.25e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.25e-10 | 58 |
embryonic cell | 1.61e-08 | 250 |
kidney tubule cell | 2.83e-07 | 10 |
nephron tubule epithelial cell | 2.83e-07 | 10 |
kidney cell | 8.10e-07 | 17 |
kidney epithelial cell | 8.10e-07 | 17 |