FFCP PHASE1:Hg19::chr2:169746878..169746970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57405 | |EntrezGene=57405 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24031 | |HGNC=24031 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBM1 | |UniProt=Q9HBM1 | ||
|association_with_transcript=0bp_to_ENST00000282074,NM_020675,uc002uel.2_5end | |association_with_transcript=0bp_to_ENST00000282074,NM_020675,uc002uel.2_5end | ||
|cluster_id=chr2:169746878..169746970,- | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_SPC25_5end | |description=CAGE_peak_1_at_SPC25_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.00e-13!254;CL:0000012!2.40e-13!682;CL:0000548!2.79e-13!679;CL:0000004!2.79e-13!679;CL:0000255!2.79e-13!679;CL:0002321!1.12e-08!248;CL:0000220!3.27e-08!246;CL:0000055!1.25e-07!180;CL:0002319!2.29e-07!25;CL:0000133!2.31e-07!59;CL:0000333!4.34e-07!41;CL:0000003!4.50e-07!722 | |ontology_enrichment_celltype=CL:0000066!1.00e-13!254;CL:0000012!2.40e-13!682;CL:0000548!2.79e-13!679;CL:0000004!2.79e-13!679;CL:0000255!2.79e-13!679;CL:0002321!1.12e-08!248;CL:0000220!3.27e-08!246;CL:0000055!1.25e-07!180;CL:0002319!2.29e-07!25;CL:0000133!2.31e-07!59;CL:0000333!4.34e-07!41;CL:0000003!4.50e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.38e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;1.38e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.40e-14,253;CL:0002321,3.13e-08,250;CL:0000133,1.36e-07,59;CL:0002319,1.74e-07,25;CL:0000333,2.88e-07,41 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.75e-52!235;DOID:14566!3.82e-51!239;DOID:0050686!5.06e-27!137;DOID:0050687!2.31e-25!143;DOID:2531!8.74e-22!51;DOID:0060083!8.74e-22!51;DOID:305!3.00e-19!106;DOID:1240!1.39e-17!39;DOID:8692!2.34e-13!31 | |ontology_enrichment_disease=DOID:162!1.75e-52!235;DOID:14566!3.82e-51!239;DOID:0050686!5.06e-27!137;DOID:0050687!2.31e-25!143;DOID:2531!8.74e-22!51;DOID:0060083!8.74e-22!51;DOID:305!3.00e-19!106;DOID:1240!1.39e-17!39;DOID:8692!2.34e-13!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.37e-14;39!DOID:2531;6.48e-14;51!DOID:0060083;6.48e-14;51!DOID:8692;3.50e-13;31!DOID:0050686;4.46e-07;137!DOID:0050687;7.64e-07;143 | |ontology_enrichment_disease_v019=DOID:1240;4.37e-14;39!DOID:2531;6.48e-14;51!DOID:0060083;6.48e-14;51!DOID:8692;3.50e-13;31!DOID:0050686;4.46e-07;137!DOID:0050687;7.64e-07;143 | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.25e-51,235;DOID:14566,4.73e-50,239;DOID:0050686,2.63e-26,137;DOID:0050687,1.37e-24,143;DOID:2531,3.39e-22,51;DOID:0060083,3.39e-22,51;DOID:305,6.45e-19,106;DOID:1240,6.57e-18,39;DOID:8692,1.35e-13,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SPC25 | |short_description=p1@SPC25 | ||
}} | }} |
Latest revision as of 01:42, 18 September 2015
Short description: | p1@SPC25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPC25_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000282074, NM_020675, uc002uel.2_5end |
EntrezGene: | SPC25 |
HGNC: | 24031 |
UniProt: | Q9HBM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.40e-14 | 253 |
embryonic cell | 3.13e-08 | 250 |
neurectodermal cell | 1.36e-07 | 59 |
neural cell | 1.74e-07 | 25 |
migratory neural crest cell | 2.88e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.25e-51 | 235 |
disease of cellular proliferation | 4.73e-50 | 239 |
organ system cancer | 2.63e-26 | 137 |
cell type cancer | 1.37e-24 | 143 |
hematologic cancer | 3.39e-22 | 51 |
immune system cancer | 3.39e-22 | 51 |
carcinoma | 6.45e-19 | 106 |
leukemia | 6.57e-18 | 39 |
myeloid leukemia | 1.35e-13 | 31 |