FFCP PHASE1:Hg19::chr7:27196267..27196311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3204 | |EntrezGene=3204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5108 | |HGNC=5108 | ||
|TSSclassifier=strong | |||
|UniProt=P31268 | |UniProt=P31268 | ||
|association_with_transcript=0bp_to_ENST00000242159,NM_006896,uc003sys.2_5end | |association_with_transcript=0bp_to_ENST00000242159,NM_006896,uc003sys.2_5end | ||
|cluster_id=chr7:27196267..27196311,- | |||
|description=CAGE_peak_1_at_HOXA7_5end | |description=CAGE_peak_1_at_HOXA7_5end | ||
|id=chr7:27196267..27196311,- | |id=chr7:27196267..27196311,- | ||
|ontology_enrichment_celltype=CL:0002078!9.51e-08!44;CL:1000497!1.18e-07!18;CL:0002518!1.18e-07!18;CL:0000136!1.66e-07!15;CL:1000449!3.04e-07!16;CL:0002139!7.28e-07!24 | |ontology_enrichment_celltype=CL:0002078!9.51e-08!44;CL:1000497!1.18e-07!18;CL:0002518!1.18e-07!18;CL:0000136!1.66e-07!15;CL:1000449!3.04e-07!16;CL:0002139!7.28e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000136;9.01e-08;13!CL:1000497;1.09e-07;17!CL:0002518;1.09e-07;17!CL:1000449;3.06e-07;15!CL:0002139;9.42e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.44e-08,15;CL:0002078,9.12e-08,45;CL:1000497,1.71e-07,17;CL:0002518,1.71e-07,17;CL:1000449,5.18e-07,15;CL:0002139,8.10e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!2.82e-12!45;UBERON:0006554!9.12e-12!44;UBERON:0000489!9.73e-12!32;UBERON:0003064!2.02e-11!37;UBERON:0002113!1.47e-08!27;UBERON:0003918!1.47e-08!27;UBERON:0005095!1.47e-08!27;UBERON:0007687!1.47e-08!27;UBERON:0000080!6.89e-08!18;UBERON:0002120!6.89e-08!18;UBERON:0004875!6.89e-08!18;UBERON:0005721!6.89e-08!18;UBERON:0005754!6.89e-08!18;UBERON:0007297!6.89e-08!18;UBERON:0004876!1.21e-07!20;UBERON:0006555!1.91e-07!17;UBERON:0005103!1.91e-07!17;UBERON:0000083!1.91e-07!17;UBERON:0009201!1.91e-07!17;UBERON:0004819!1.91e-07!17;UBERON:0006553!1.91e-07!17;UBERON:0003074!1.91e-07!17;UBERON:0003060!1.91e-07!17;UBERON:0003887!2.93e-07!21;UBERON:0004211!3.04e-07!16;UBERON:0001285!3.04e-07!16;UBERON:0007684!3.04e-07!16;UBERON:0003220!3.04e-07!16;UBERON:0004208!3.04e-07!16 | |ontology_enrichment_uberon=UBERON:0001008!2.82e-12!45;UBERON:0006554!9.12e-12!44;UBERON:0000489!9.73e-12!32;UBERON:0003064!2.02e-11!37;UBERON:0002113!1.47e-08!27;UBERON:0003918!1.47e-08!27;UBERON:0005095!1.47e-08!27;UBERON:0007687!1.47e-08!27;UBERON:0000080!6.89e-08!18;UBERON:0002120!6.89e-08!18;UBERON:0004875!6.89e-08!18;UBERON:0005721!6.89e-08!18;UBERON:0005754!6.89e-08!18;UBERON:0007297!6.89e-08!18;UBERON:0004876!1.21e-07!20;UBERON:0006555!1.91e-07!17;UBERON:0005103!1.91e-07!17;UBERON:0000083!1.91e-07!17;UBERON:0009201!1.91e-07!17;UBERON:0004819!1.91e-07!17;UBERON:0006553!1.91e-07!17;UBERON:0003074!1.91e-07!17;UBERON:0003060!1.91e-07!17;UBERON:0003887!2.93e-07!21;UBERON:0004211!3.04e-07!16;UBERON:0001285!3.04e-07!16;UBERON:0007684!3.04e-07!16;UBERON:0003220!3.04e-07!16;UBERON:0004208!3.04e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0000489;1.19e-10;29!UBERON:0006554;2.22e-08;30!UBERON:0001008;2.22e-08;30!UBERON:0006555;3.06e-07;15!UBERON:0004819;3.06e-07;15!UBERON:0001285;3.06e-07;15!UBERON:0007684;3.06e-07;15!UBERON:0002113;3.21e-07;24!UBERON:0011143;3.21e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,3.25e-11,31;UBERON:0001008,3.06e-10,48;UBERON:0006554,1.00e-09,47;UBERON:0003064,8.77e-09,28;UBERON:0002113,8.99e-08,26;UBERON:0003918,8.99e-08,26;UBERON:0011143,8.99e-08,26;UBERON:0005095,8.99e-08,26;UBERON:0007687,8.99e-08,26;UBERON:0006555,3.00e-07,16;UBERON:0004819,3.00e-07,16;UBERON:0002100,3.10e-07,199;UBERON:0004211,5.18e-07,15;UBERON:0009773,5.18e-07,15;UBERON:0001231,5.18e-07,15;UBERON:0001285,5.18e-07,15;UBERON:0007684,5.18e-07,15;UBERON:0004208,5.18e-07,15 | |||
|phase1_expression=2.90685406832891,3.21150785836475,6.76581139660662,3.00219895059391,3.12872766099101,6.10636966870258,10.1319951267324,3.15859936713415,3.65659879479774,2.21160542851358,0.697801167972428,0,0,3.58922423584135,2.31978163009541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,7.35938405512865,0,3.52320527201817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,2.64342657158052,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,4.51204119572301,4.63508860674636,8.74814541756209,5.83961844363163,0,0,0.087834785693126,3.27447688744282,0,0,0,0,0,0.238490624305342,0,0,0.993812036833525,0,0.694281003215189,0,0,2.47606237746061,2.71693456497854,3.35941786920128,7.47109151642091,9.70689777017544,8.45941565929209,6.0821768457481,6.10155143870424,5.51494620518803,1.62028389576352,4.64358587077215,2.91888184414021,3.0405099730497,3.06633274931766,1.89853131913626,3.48083313467774,0,0,0,3.97577561356255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39117888882882,2.11382097558777,2.10434827678571,1.40450806702248,0,0,0,0,0,9.10161361938026,1.43723628363248,0,0,0,0,0,0,0,0.717558542755448,2.98980344345994,2.7551147150743,0.600182192168805,4.43125875725287,0.772921620136887,2.04728541964749,1.0126579934476,1.75386609290158,0.252433774244115,4.51044503347267,0,1.42003837006646,3.42557133973977,1.52604533079439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36613600079688,2.19160097101532,0.723033089650446,2.42646740011267,2.39667388501647,3.55905928666645,1.75280700608214,2.15843611637881,1.15424147083917,0,1.40241773803446,0,1.47008711385542,0,0,0.590789906681404,0,8.48620225947483,0,0.548751427043128,2.24803506515239,1.3068766413512,0,0,0,0,0,0,6.78522304477047,6.48179717607255,5.51737041480335,0,0,0,0,0,0,0,0,1.61205340865127,0.581267877027924,0.766765358330422,0,0,0.207328115540772,0.288239906833923,0.25248486685276,1.33345578013555,4.20187268114105,3.51652341630141,0,0.616964956219941,0.600686115687835,0,0,0,0,3.87815147273333,7.15312891703765,0.845302752556,3.98907174877306,2.08014873822732,3.60090323966999,0,1.3321108950805,0,7.05408087008876,2.46972101034231,1.95441710576241,0,0,0.904318131178758,0,0.799783929456456,0,0,0,0,0,1.42636905040718,2.60606352001643,1.84928690295345,2.86497541183833,5.38008691168931,0,0,0,0,1.30139853857622,0,0,0,0,0,0,4.78496817704646,2.00068208423871,3.52644530809656,0,0,0,0,6.62081419400982,9.09630016223939,2.0694614258501,2.65690239414175,3.13427586520895,2.60650843404249,0.195801157462741,0.343143423810856,0.206768026122887,0,0,0,0,0.30239029332968,3.47350930946288,1.99500565274481,3.64858122762996,3.97231362692673,3.07024349440022,5.62988724002626,0,2.62156479464514,1.9531789784444,4.68124789278712,0,1.62694529843943,8.7018803705968,1.40354529212299,4.60404944679482,3.55924789310281,3.64182336013434,4.72047893853927,3.60959690325929,2.0794141018192,7.84349769176855,2.92278449306521,2.00548094896464,10.2360045663807,4.08224892663638,4.10240240594065,9.25363516141736,4.06419656315779,2.50844886927427,3.05851527654046,4.15538004464362,5.1491193586101,0,0,0,0,0,1.03041011647722,7.6002655799225,7.50836449277351,4.59412430396938,3.90036147621913,0,10.0537547023807,0.616194468458578,0.921022048356777,1.24052915236078,3.00776685631166,2.46528379654188,1.87498580315422,9.5264278142009,0,0,0,0,0,0,0,2.15623506123262,0,0,0,0,0,0,0,6.65334257409468,3.42351190427136,0,0,5.03642881233281,3.84351841630477,3.76999687506197,0,0,0,0,4.6305563029944,2.11300293513511,4.64099698787152,4.24216295861138,0,0,0,0,1.73632660280006,1.31178950409327,2.02910376962704,2.16876448669825,3.66204283291914,2.86822704408103,4.02821068153797,3.5667105148125,2.12856638442359,6.96655196482292,4.61012850143863,0,0,0,0,0,1.69458841398202,2.15252686335615,0,1.7737206141467,1.1486170010348,0,0,0,0,0,0,0,0,4.91390727186376,0,7.10616626344992,0,0,0,11.1598390910176,1.39705560002972,0.383010740264733,1.48171507906718,0,0.842391534340376,0,0,0,1.35433422241283,4.01470187759249,0.80719882876419,0.851692475380653,0.687010689511529,1.22896305723383,2.01308497103174,1.16794399198336,0,0,0,0,0,1.4098700508785,3.55567026775618,4.10222901961303,0,0,9.37649284461163,0,0.593929361665277,0,0,0,0,2.63686198762815,0,3.98495976502139,2.21027132424918,0,20.2491991354267,0,0,0,0,0,8.48333288477629,0,0,0,0,0,0,0,5.79999660347835,0,0,15.8379746784517,7.23961083807076,4.08246458736556,2.08349993919951,0,0,0,0.110579259931225,0,0,0,4.87983104975112,4.84786628573922,0,0.23056390438806,0,0,0.31900115973192,1.55715908783166,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0.635746315921515,0,1.79556088975062,6.64359435739522,0,2.98578579323551,3.27292988662355,3.05515072466813,0.296521128680622,1.85345908419754,0.939797545549098,0.067401132980677,0.802577647298789,0,0,0,0,3.55125962564451,0,0,0.063186579628488,0.450970258243478,1.03688191397247,0,0,0,0,4.55375273647668,0.277349346026277,2.08271686002157,3.527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| ||
|short_description=p1@HOXA7 | |short_description=p1@HOXA7 | ||
}} | }} |
Latest revision as of 01:37, 18 September 2015
Short description: | p1@HOXA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXA7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000242159, NM_006896, uc003sys.2_5end |
EntrezGene: | HOXA7 |
HGNC: | 5108 |
UniProt: | P31268 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.44e-08 | 15 |
meso-epithelial cell | 9.12e-08 | 45 |
kidney cell | 1.71e-07 | 17 |
kidney epithelial cell | 1.71e-07 | 17 |
epithelial cell of nephron | 5.18e-07 | 15 |
endothelial cell of vascular tree | 8.10e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 3.25e-11 | 31 |
renal system | 3.06e-10 | 48 |
urinary system structure | 1.00e-09 | 47 |
intermediate mesoderm | 8.77e-09 | 28 |
kidney | 8.99e-08 | 26 |
kidney mesenchyme | 8.99e-08 | 26 |
upper urinary tract | 8.99e-08 | 26 |
kidney rudiment | 8.99e-08 | 26 |
kidney field | 8.99e-08 | 26 |
excretory tube | 3.00e-07 | 16 |
kidney epithelium | 3.00e-07 | 16 |
trunk | 3.10e-07 | 199 |
nephron epithelium | 5.18e-07 | 15 |
renal tubule | 5.18e-07 | 15 |
nephron tubule | 5.18e-07 | 15 |
nephron | 5.18e-07 | 15 |
uriniferous tubule | 5.18e-07 | 15 |
nephrogenic mesenchyme | 5.18e-07 | 15 |