FFCP PHASE1:Hg19::chr4:55991752..55991770,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:55991752..55991770,-
|short_description=p1@KDR
|description=CAGE_peak_1_at_KDR_5end
|association_with_transcript=0bp_to_ENST00000263923,NM_002253,uc003has....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3791 | |EntrezGene=3791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6307 | |HGNC=6307 | ||
|TSSclassifier=strong | |||
|UniProt=P35968 | |UniProt=P35968 | ||
|association_with_transcript=0bp_to_ENST00000263923,NM_002253,uc003has.2,uc003hat.1,uc011bzx.1_5end | |||
|cluster_id=chr4:55991752..55991770,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_KDR_5end | |||
|id=chr4:55991752..55991770,- | |||
|ontology_enrichment_celltype=CL:0000115!2.28e-19!35;CL:0002139!2.69e-19!24;CL:0000071!8.46e-15!18;CL:0002546!8.46e-15!18;CL:0000222!1.06e-13!119;CL:0002078!1.33e-13!44;CL:0000213!8.71e-12!57;CL:0000215!8.71e-12!57;CL:1000413!2.80e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.48e-21;24!CL:0000115;2.78e-19;36!CL:0000071;1.74e-16;18!CL:0002078;4.26e-11;45!CL:0000213;8.97e-10;58!CL:0000215;8.97e-10;58!CL:1000413;3.90e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.47e-23,36;CL:0002139,1.52e-21,24;CL:0002078,5.79e-17,45;CL:0000071,1.79e-16,18;CL:0002546,1.79e-16,18;CL:0000213,3.47e-14,58;CL:0000215,3.47e-14,58;CL:0000222,1.26e-13,121;CL:1000413,3.94e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.74e-16;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;1.74e-16;18!UBERON:0001986;1.74e-16;18!UBERON:0004852;1.74e-16;18!UBERON:0000487;5.49e-14;22!UBERON:0002049;1.30e-11;75!UBERON:0007798;1.30e-11;75!UBERON:0000055;3.14e-11;65!UBERON:0006914;3.45e-11;25!UBERON:0007500;5.34e-11;56!UBERON:0001981;5.34e-11;56!UBERON:0004537;5.34e-11;56!UBERON:0007100;3.21e-10;25!UBERON:0001637;9.30e-10;42!UBERON:0003509;9.30e-10;42!UBERON:0004572;9.30e-10;42!UBERON:0003915;3.90e-09;9!UBERON:0004700;3.90e-09;9!UBERON:0001917;3.90e-09;9!UBERON:0004573;9.19e-09;33!UBERON:0004571;9.19e-09;33!UBERON:0000948;9.49e-09;22!UBERON:0001009;1.06e-08;112!UBERON:0000490;1.49e-08;33!UBERON:0004535;5.22e-08;109!UBERON:0007023;6.17e-08;114!UBERON:0000073;3.48e-07;53!UBERON:0002616;3.48e-07;53!UBERON:0000947;4.63e-07;21!UBERON:0010191;4.63e-07;21!UBERON:0003914;5.08e-07;74!UBERON:0001638;6.60e-07;9!UBERON:0003920;6.60e-07;9!UBERON:0004582;6.60e-07;9 | |||
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| ||
|short_description=p1@KDR | |||
}} | }} |
Latest revision as of 01:34, 18 September 2015
Short description: | p1@KDR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KDR_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000263923, NM_002253, uc003has.2, uc003hat.1, uc011bzx.1_5end |
EntrezGene: | KDR |
HGNC: | 6307 |
UniProt: | P35968 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.47e-23 | 36 |
endothelial cell of vascular tree | 1.52e-21 | 24 |
meso-epithelial cell | 5.79e-17 | 45 |
blood vessel endothelial cell | 1.79e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.79e-16 | 18 |
lining cell | 3.47e-14 | 58 |
barrier cell | 3.47e-14 | 58 |
mesodermal cell | 1.26e-13 | 121 |
endothelial cell of artery | 3.94e-09 | 9 |