FFCP PHASE1:Hg19::chr10:35104185..35104267,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56288 | |EntrezGene=56288 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16051 | |HGNC=16051 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VWU8,Q8TEW0,Q5VWV2,F5H5T0,Q6IQ47 | |UniProt=Q5VWU8,Q8TEW0,Q5VWV2,F5H5T0,Q6IQ47 | ||
|association_with_transcript=0bp_to_ENST00000340077,ENST00000346874,ENST00000350537,ENST00000374773,ENST00000374776,ENST00000374788,ENST00000374789,ENST00000374790,ENST00000374794,ENST00000545260,ENST00000545693,NM_001184785,NM_001184786,NM_001184787,NM_001184788,NM_001184789,NM_001184790,NM_001184791,NM_001184792,NM_001184793,NM_001184794,NM_019619_5end | |association_with_transcript=0bp_to_ENST00000340077,ENST00000346874,ENST00000350537,ENST00000374773,ENST00000374776,ENST00000374788,ENST00000374789,ENST00000374790,ENST00000374794,ENST00000545260,ENST00000545693,NM_001184785,NM_001184786,NM_001184787,NM_001184788,NM_001184789,NM_001184790,NM_001184791,NM_001184792,NM_001184793,NM_001184794,NM_019619_5end | ||
|cluster_id=chr10:35104185..35104267,- | |||
|description=CAGE_peak_1_at_PARD3_5end | |description=CAGE_peak_1_at_PARD3_5end | ||
|id=chr10:35104185..35104267,- | |id=chr10:35104185..35104267,- | ||
|ontology_enrichment_celltype=CL:0000066!1.68e-14!254;CL:0000223!6.60e-10!59;CL:0002076!2.84e-07!43;CL:0002321!7.79e-07!248 | |ontology_enrichment_celltype=CL:0000066!1.68e-14!254;CL:0000223!6.60e-10!59;CL:0002076!2.84e-07!43;CL:0002321!7.79e-07!248 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.37e-14,253;CL:0000223,1.92e-10,58;CL:0002076,8.63e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.21e-10;31 | |||
|ontology_enrichment_disease=DOID:305!1.33e-11!106;DOID:0050687!6.56e-11!143;DOID:7!4.84e-08!39 | |ontology_enrichment_disease=DOID:305!1.33e-11!106;DOID:0050687!6.56e-11!143;DOID:7!4.84e-08!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.27e-11,106;DOID:0050687,7.18e-11,143;DOID:7,4.69e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.18e-21!347;UBERON:0000475!3.21e-17!365;UBERON:0001007!1.28e-15!155;UBERON:0001555!1.28e-15!155;UBERON:0007026!1.28e-15!155;UBERON:0004119!1.35e-15!169;UBERON:0000925!1.35e-15!169;UBERON:0006595!1.35e-15!169;UBERON:0000483!3.36e-13!309;UBERON:0000119!3.71e-13!312;UBERON:0004111!4.03e-13!241;UBERON:0003104!4.97e-13!238;UBERON:0009142!4.97e-13!238;UBERON:0004921!1.44e-12!129;UBERON:0004185!1.44e-12!129;UBERON:0000477!3.68e-12!286;UBERON:0000466!8.06e-11!126;UBERON:0000468!1.25e-10!659;UBERON:0005911!1.48e-10!82;UBERON:0003103!2.37e-10!69;UBERON:0000077!7.14e-10!130;UBERON:0005177!7.19e-10!107;UBERON:0002100!7.41e-10!216;UBERON:0000161!8.85e-10!35;UBERON:0001048!9.03e-10!168;UBERON:0000922!1.76e-09!612;UBERON:0000062!1.81e-09!511;UBERON:0000467!1.35e-08!625;UBERON:0000464!1.70e-08!104;UBERON:0000480!2.43e-08!626;UBERON:0002050!4.46e-08!605;UBERON:0005423!4.46e-08!605;UBERON:0003929!4.53e-08!54;UBERON:0005156!4.59e-08!59;UBERON:0000990!4.59e-08!59;UBERON:0000923!8.76e-08!604;UBERON:0005291!8.76e-08!604;UBERON:0006598!8.76e-08!604;UBERON:0002532!8.76e-08!604;UBERON:0002530!9.28e-08!59;UBERON:0001008!1.25e-07!45;UBERON:0007023!1.49e-07!115;UBERON:0000025!2.30e-07!194;UBERON:0006554!3.76e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.98e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.65e-15,145;UBERON:0001555,1.65e-15,145;UBERON:0007026,1.65e-15,145;UBERON:0004119,2.25e-15,160;UBERON:0000925,2.25e-15,160;UBERON:0006595,2.25e-15,160;UBERON:0004111,6.37e-13,240;UBERON:0011216,1.32e-12,223;UBERON:0000483,1.59e-12,306;UBERON:0000119,1.75e-12,309;UBERON:0004921,1.89e-12,118;UBERON:0005911,1.32e-10,82;UBERON:0003103,1.77e-10,68;UBERON:0002100,8.56e-10,199;UBERON:0000161,9.65e-10,36;UBERON:0005177,9.90e-10,101;UBERON:0001048,6.81e-09,160;UBERON:0003104,1.97e-08,160;UBERON:0009142,1.97e-08,160;UBERON:0003929,4.07e-08,54;UBERON:0005156,4.45e-08,59;UBERON:0000990,4.45e-08,59;UBERON:0002530,8.40e-08,59;UBERON:0000922,1.09e-07,592;UBERON:0007023,2.66e-07,114;UBERON:0000025,3.77e-07,192;UBERON:0001008,9.12e-07,48 | |||
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| ||
|short_description=p1@PARD3 | |short_description=p1@PARD3 | ||
}} | }} |
Latest revision as of 01:33, 18 September 2015
Short description: | p1@PARD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PARD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000340077, ENST00000346874, ENST00000350537, ENST00000374773, ENST00000374776, ENST00000374788, ENST00000374789, ENST00000374790, ENST00000374794, ENST00000545260, ENST00000545693, NM_001184785, NM_001184786, NM_001184787, NM_001184788, NM_001184789, NM_001184790, NM_001184791, NM_001184792, NM_001184793, NM_001184794, NM_019619_5end |
EntrezGene: | PARD3 |
HGNC: | 16051 |
UniProt: | Q5VWU8Q8TEW0Q5VWV2F5H5T0Q6IQ47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.37e-14 | 253 |
endodermal cell | 1.92e-10 | 58 |
endo-epithelial cell | 8.63e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.65e-15 | 145 |
digestive tract | 1.65e-15 | 145 |
primitive gut | 1.65e-15 | 145 |
endoderm-derived structure | 2.25e-15 | 160 |
endoderm | 2.25e-15 | 160 |
presumptive endoderm | 2.25e-15 | 160 |
anatomical conduit | 6.37e-13 | 240 |
organ system subdivision | 1.32e-12 | 223 |
epithelium | 1.59e-12 | 306 |
cell layer | 1.75e-12 | 309 |
subdivision of digestive tract | 1.89e-12 | 118 |
endo-epithelium | 1.32e-10 | 82 |
compound organ | 1.77e-10 | 68 |
trunk | 8.56e-10 | 199 |
orifice | 9.65e-10 | 36 |
trunk region element | 9.90e-10 | 101 |
primordium | 6.81e-09 | 160 |
mesenchyme | 1.97e-08 | 160 |
entire embryonic mesenchyme | 1.97e-08 | 160 |
gut epithelium | 4.07e-08 | 54 |
reproductive structure | 4.45e-08 | 59 |
reproductive system | 4.45e-08 | 59 |
gland | 8.40e-08 | 59 |
embryo | 1.09e-07 | 592 |
adult organism | 2.66e-07 | 114 |
tube | 3.77e-07 | 192 |
renal system | 9.12e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.27e-11 | 106 |
cell type cancer | 7.18e-11 | 143 |
disease of anatomical entity | 4.69e-08 | 39 |