FFCP PHASE1:Hg19::chr11:45826933..45826944,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:45826933..45826944,+ to FFCP PHASE1:Hg19::chr11:45826933..45826944,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55343 | |EntrezGene=55343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20197 | |HGNC=20197 | ||
|TSSclassifier=strong | |||
|UniProt=Q96K20 | |UniProt=Q96K20 | ||
|association_with_transcript=233bp_to_ENST00000540685_5end | |||
|cluster_id=chr11:45826933..45826944,+ | |||
|description=CAGE_peak_3_at_SLC35C1_5end | |||
|id=chr11:45826933..45826944,+ | |||
|ontology_enrichment_celltype=CL:0000183!7.30e-11!59;CL:0000055!3.06e-10!180;CL:0000680!6.16e-10!57;CL:0000056!6.16e-10!57;CL:0000355!6.16e-10!57;CL:0000187!1.92e-09!54;CL:0000192!2.89e-09!42;CL:0000514!2.89e-09!42;CL:0000222!2.17e-08!119;CL:0000057!1.28e-07!75;CL:0000220!3.75e-07!246;CL:0000393!5.62e-07!60;CL:0000211!5.62e-07!60;CL:0002321!6.59e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.77e-10;55!CL:0000048;2.02e-09;58!CL:0000136;2.47e-08;13!CL:0000034;1.89e-07;69!CL:0000723;2.69e-07;61!CL:0000192;3.89e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.13e-09,43;CL:0000514,1.13e-09,43;CL:0000136,7.80e-08,15;CL:0000680,1.44e-07,58;CL:0000056,1.44e-07,58;CL:0000355,1.44e-07,58;CL:0000187,2.21e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;3.89e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.69e-13!143;UBERON:0000914!4.09e-13!83;UBERON:0002329!4.09e-13!83;UBERON:0003077!4.09e-13!83;UBERON:0003059!4.09e-13!83;UBERON:0007282!4.09e-13!83;UBERON:0009618!4.09e-13!83;UBERON:0007285!4.09e-13!83;UBERON:0004290!1.91e-12!70;UBERON:0002100!2.99e-12!216;UBERON:0000486!3.70e-12!82;UBERON:0000475!1.77e-10!365;UBERON:0001134!1.83e-10!61;UBERON:0002036!1.83e-10!61;UBERON:0003082!1.83e-10!61;UBERON:0003104!9.58e-10!238;UBERON:0009142!9.58e-10!238;UBERON:0002385!1.91e-09!63;UBERON:0001015!1.91e-09!63;UBERON:0000383!1.91e-09!63;UBERON:0000490!2.12e-09!138;UBERON:0003914!4.55e-08!118;UBERON:0000481!1.58e-07!347;UBERON:0002049!1.71e-07!79;UBERON:0007798!1.71e-07!79;UBERON:0001637!2.43e-07!42;UBERON:0003509!2.43e-07!42;UBERON:0004572!2.43e-07!42;UBERON:0000119!4.48e-07!312;UBERON:0000483!6.25e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.55e-07;19!UBERON:0006925;2.55e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,4.80e-14,122;UBERON:0003104,1.25e-13,160;UBERON:0009142,1.25e-13,160;UBERON:0007503,6.89e-12,78;UBERON:0002100,1.23e-11,199;UBERON:0007524,2.69e-11,73;UBERON:0000490,6.51e-11,148;UBERON:0002329,8.58e-11,71;UBERON:0003059,8.58e-11,71;UBERON:0007282,8.58e-11,71;UBERON:0004290,8.58e-11,71;UBERON:0009618,8.58e-11,71;UBERON:0003077,1.56e-10,72;UBERON:0007285,1.56e-10,72;UBERON:0001134,2.01e-08,62;UBERON:0002036,2.01e-08,62;UBERON:0003082,2.01e-08,62;UBERON:0000486,3.95e-08,83;UBERON:0002385,5.74e-08,64;UBERON:0001015,5.74e-08,64;UBERON:0000383,5.74e-08,64;UBERON:0002107,2.26e-07,19;UBERON:0006925,2.26e-07,19;UBERON:0008836,2.26e-07,19;UBERON:0002530,5.69e-07,59 | |||
|phase1_expression=1.09007027562334,1.07050261945492,2.53717927372748,2.00146596706261,0,1.74467704820074,0,1.26343974685366,1.04474251279935,0.491467873003018,1.39560233594486,0.218441372130172,1.05506791291381,0.74259811776028,0,0,1.20538905604795,1.46062018077475,0.487932798790507,0.738726348460727,1.22400414746552,0.313454721478088,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,1.44575660953827,0,0,0.795285947051099,0.973269740605272,0.189069634328136,0.665188192387692,0.614843499851882,0,0,0,0,0.348259474598534,0.398873881556595,0.476981248610684,0,0.371457501329565,0.596287222100115,0,0.347140501607594,0,0,0.825354125820202,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,1.10298924103761,2.43042584364528,0.17859945656816,0.44905874525234,0.112611480483322,0,4.74632829784064,0.366403487860815,0,0,0,0.496971951695318,0.633152558322899,0.662045904066094,0.860509862246441,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,0.269421344139376,0.490385709340376,1.05950199351452,0.576175924479999,0,1.24864030732128,1.1409436430889,0.298897361103602,0.469737994575059,0.323745888736263,0.140450806702248,0.408308342509787,0.245668634623536,0.206651562351531,0,1.23633464639278,0.910161361938026,1.43723628363248,0,0.500474079487857,1.10825646193673,0.438977620880838,0.612975591598039,0.300476117813194,0.453728732640084,0.358779271377724,0.427114777637135,0.847727604638247,0.300091096084402,0.515262646192195,0.257640540045629,0.744467425326359,1.0126579934476,1.46155507741798,0,0.828449087780694,1.45481451136931,0.710019185033229,0.503760491138201,0.847802961552438,0.57978255948989,0.818238361772504,0.860413786167011,0.121973706129595,0,0,0,0,0,1.56449532329816,1.92972281457866,1.38134921352481,0.464367928031979,0,0.236613600079688,0.505754070234305,0,0.110293972732394,0,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,0,1.40241773803446,1.2347220339942,2.94017422771084,3.80265104465493,3.9313088667105,5.90789906681404,0,0.122988438543114,0.857839051492628,0.98775256867763,0,0.301586917234893,0.185176890317059,0,1.03993478527958,0,0.231860809950154,1.29149563659404,0.577465791044295,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0.445893486866185,0.93733833986777,0.671928512795438,0.850650583454319,0.268675568108545,0,0,0.492663237895943,0.088048434013226,0,0,0,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.224262168690721,0.43596006883328,0.36669142910475,2.97324946242889,0,0,1.06375246633948,0,1.02882949704857,1.41849132023278,0,2.85955987316295,1.62786481617433,3.29296134712308,0.65147236858747,1.42156779497018,0,1.20575750823834,0.871533458600294,0.699810938274399,0,0,0,0.718874566474748,1.14861935834114,0,0.723906533337896,1.43833425785268,0.179060963239896,0.336255431980582,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0.271265023699736,2.9115920614313,1.78428988797162,4.1002627908823,1.99140405487612,0,2.27407504055985,0,0.664225598535437,1.10621501125022,0.781952530212746,0.587403472388222,0.686286847621712,0,0.215714200818617,0,0.303127571446259,0,0,2.48107807818777,0.460385919864187,1.12264037773229,1.66580894032411,0.511707249066704,0.64341568457443,0,1.3878872442239,0.710246901252508,0.98552587216571,0,0.697262270759755,0.241718899183244,1.40354529212299,0.276242966807689,1.49258782613989,0.910455840033585,1.18011973463482,0,0,0,2.92278449306521,0.105551628892876,0,1.53084334748864,0.647747748306418,0,0.541892875087706,1.50506932156456,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,0,0.386682873168488,0.770243085573222,0.767518373630648,0.275673144969061,0.429680979473094,0.145016693914229,0.596586391912706,0.890320356467374,0.165284915360978,0.576570202095319,0.127612712494584,0.30347334256665,0.929691098594572,1.25924938732256,0,0.924100740528266,0.532306030317022,1.73986598415015,0.37064843820784,0.143124886741991,0.372158369359667,0,1.71567174531442,2.55897791311334,0,1.27281299170375,1.56989728039846,0.359744915166629,0.54907405947211,0.706874414074119,2.42618977887979,3.17020642346017,0,2.92580243453754,1.21856744815642,1.05650146756755,1.50149902548784,3.25232493493539,1.13008116620243,0.551365343546124,1.99031692572366,0.876901770507525,1.15755106853338,0,0.608731130888112,0.6196469961995,0.281695602532241,0.143411352204052,0.88424136911809,1.426684205925,1.41904425628239,0.844430541190656,0.329294892959902,0,1.74967360122491,0.192444225451024,0.670302275535787,0,0.282431402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|phase1_expression=1.09007027562334,1.07050261945492,2.53717927372748,2.00146596706261,0,1.74467704820074,0,1.26343974685366,1.04474251279935,0.491467873003018,1.39560233594486,0.218441372130172,1.05506791291381,0.74259811776028,0,0,1.20538905604795,1.46062018077475,0.487932798790507,0.738726348460727,1.22400414746552,0.313454721478088,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,1.44575660953827,0,0,0.795285947051099,0.973269740605272,0.189069634328136,0.665188192387692,0.614843499851882,0,0,0,0,0.348259474598534,0.398873881556595,0.476981248610684,0,0.371457501329565,0.596287222100115,0,0.347140501607594,0,0,0.825354125820202,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,1.10298924103761,2.43042584364528,0.17859945656816,0.44905874525234,0.112611480483322,0,4.74632829784064,0.366403487860815,0,0,0,0.496971951695318,0.633152558322899,0.662045904066094,0.860509862246441,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,0.269421344139376,0.490385709340376,1.05950199351452,0.576175924479999,0,1.24864030732128,1.1409436430889,0.298897361103602,0.469737994575059,0.323745888736263,0.140450806702248,0.408308342509787,0.245668634623536,0.206651562351531,0,1.23633464639278,0.910161361938026,1.43723628363248,0,0.500474079487857,1.10825646193673,0.438977620880838,0.612975591598039,0.300476117813194,0.453728732640084,0.358779271377724,0.427114777637135,0.847727604638247,0.300091096084402,0.515262646192195,0.257640540045629,0.744467425326359,1.0126579934476,1.46155507741798,0,0.828449087780694,1.45481451136931,0.710019185033229,0.503760491138201,0.847802961552438,0.57978255948989,0.818238361772504,0.860413786167011,0.121973706129595,0,0,0,0,0,1.56449532329816,1.92972281457866,1.38134921352481,0.464367928031979,0,0.236613600079688,0.505754070234305,0,0.110293972732394,0,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,0,1.40241773803446,1.2347220339942,2.94017422771084,3.80265104465493,3.9313088667105,5.90789906681404,0,0.122988438543114,0.857839051492628,0.98775256867763,0,0.301586917234893,0.185176890317059,0,1.03993478527958,0,0.231860809950154,1.29149563659404,0.577465791044295,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0.445893486866185,0.93733833986777,0.671928512795438,0.850650583454319,0.268675568108545,0,0,0.492663237895943,0.088048434013226,0,0,0,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.224262168690721,0.43596006883328,0.36669142910475,2.97324946242889,0,0,1.06375246633948,0,1.02882949704857,1.41849132023278,0,2.85955987316295,1.62786481617433,3.29296134712308,0.65147236858747,1.42156779497018,0,1.20575750823834,0.871533458600294,0.699810938274399,0,0,0,0.718874566474748,1.14861935834114,0,0.723906533337896,1.43833425785268,0.179060963239896,0.336255431980582,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0.271265023699736,2.9115920614313,1.78428988797162,4.1002627908823,1.99140405487612,0,2.27407504055985,0,0.664225598535437,1.10621501125022,0.781952530212746,0.587403472388222,0.686286847621712,0,0.215714200818617,0,0.303127571446259,0,0,2.48107807818777,0.460385919864187,1.12264037773229,1.66580894032411,0.511707249066704,0.64341568457443,0,1.3878872442239,0.710246901252508,0.98552587216571,0,0.697262270759755,0.241718899183244,1.40354529212299,0.276242966807689,1.49258782613989,0.910455840033585,1.18011973463482,0,0,0,2.92278449306521,0.105551628892876,0,1.53084334748864,0.647747748306418,0,0.541892875087706,1.50506932156456,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,0,0.386682873168488,0.770243085573222,0.767518373630648,0.275673144969061,0.429680979473094,0.145016693914229,0.596586391912706,0.890320356467374,0.165284915360978,0.576570202095319,0.127612712494584,0.30347334256665,0.929691098594572,1.25924938732256,0,0.924100740528266,0.532306030317022,1.73986598415015,0.37064843820784,0.143124886741991,0.372158369359667,0,1.71567174531442,2.55897791311334,0,1.27281299170375,1.56989728039846,0.359744915166629,0.54907405947211,0.706874414074119,2.42618977887979,3.17020642346017,0,2.92580243453754,1.21856744815642,1.05650146756755,1.50149902548784,3.25232493493539,1.13008116620243,0.551365343546124,1.99031692572366,0.876901770507525,1.15755106853338,0,0.608731130888112,0.6196469961995,0.281695602532241,0.143411352204052,0.88424136911809,1.426684205925,1.41904425628239,0.844430541190656,0.329294892959902,0,1.74967360122491,0.192444225451024,0.670302275535787,0,0.282431402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| ||
|short_description=p3@SLC35C1 | |||
}} | }} |
Latest revision as of 01:23, 18 September 2015
Short description: | p3@SLC35C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC35C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 233bp_to_ENST00000540685_5end |
EntrezGene: | SLC35C1 |
HGNC: | 20197 |
UniProt: | Q96K20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.13e-09 | 43 |
smooth muscle myoblast | 1.13e-09 | 43 |
fat cell | 7.80e-08 | 15 |
muscle precursor cell | 1.44e-07 | 58 |
myoblast | 1.44e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.44e-07 | 58 |
muscle cell | 2.21e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 4.80e-14 | 122 |
mesenchyme | 1.25e-13 | 160 |
entire embryonic mesenchyme | 1.25e-13 | 160 |
epithelial vesicle | 6.89e-12 | 78 |
trunk | 1.23e-11 | 199 |
dense mesenchyme tissue | 2.69e-11 | 73 |
unilaminar epithelium | 6.51e-11 | 148 |
somite | 8.58e-11 | 71 |
presomitic mesoderm | 8.58e-11 | 71 |
presumptive segmental plate | 8.58e-11 | 71 |
dermomyotome | 8.58e-11 | 71 |
trunk paraxial mesoderm | 8.58e-11 | 71 |
paraxial mesoderm | 1.56e-10 | 72 |
presumptive paraxial mesoderm | 1.56e-10 | 72 |
skeletal muscle tissue | 2.01e-08 | 62 |
striated muscle tissue | 2.01e-08 | 62 |
myotome | 2.01e-08 | 62 |
multilaminar epithelium | 3.95e-08 | 83 |
muscle tissue | 5.74e-08 | 64 |
musculature | 5.74e-08 | 64 |
musculature of body | 5.74e-08 | 64 |
liver | 2.26e-07 | 19 |
digestive gland | 2.26e-07 | 19 |
liver bud | 2.26e-07 | 19 |
gland | 5.69e-07 | 59 |