FFCP PHASE1:Hg19::chr19:40724201..40724218,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148014 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26395 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N6N2 | |||
|association_with_transcript=70bp_to_AK054935_5end | |||
|cluster_id=chr19:40724201..40724218,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_TTC9B_5end | |||
|id=chr19:40724201..40724218,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;9.34e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.13e-16;82!UBERON:0006215;1.65e-15;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;2.27e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.57e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.20e-92!57;UBERON:0005068!3.20e-92!57;UBERON:0006241!3.20e-92!57;UBERON:0007135!3.20e-92!57;UBERON:0001017!3.40e-86!82;UBERON:0000073!2.75e-85!94;UBERON:0001016!2.75e-85!94;UBERON:0005743!8.43e-85!86;UBERON:0002616!6.44e-77!59;UBERON:0002780!2.69e-74!41;UBERON:0001890!2.69e-74!41;UBERON:0006240!2.69e-74!41;UBERON:0000955!5.48e-74!69;UBERON:0006238!5.48e-74!69;UBERON:0003080!2.48e-72!42;UBERON:0001893!9.50e-67!34;UBERON:0001869!1.23e-66!32;UBERON:0002020!1.33e-66!34;UBERON:0003528!1.33e-66!34;UBERON:0003075!8.53e-66!86;UBERON:0007284!8.53e-66!86;UBERON:0002791!4.32e-64!33;UBERON:0002346!2.51e-62!90;UBERON:0002619!8.46e-57!22;UBERON:0001950!6.31e-52!20;UBERON:0003056!7.23e-50!61;UBERON:0000956!1.74e-49!25;UBERON:0000203!1.74e-49!25;UBERON:0007023!1.93e-48!115;UBERON:0004121!9.03e-42!169;UBERON:0000924!1.72e-40!173;UBERON:0006601!1.72e-40!173;UBERON:0000033!1.90e-40!123;UBERON:0000153!5.24e-38!129;UBERON:0007811!5.24e-38!129;UBERON:0000025!5.35e-21!194;UBERON:0003076!4.95e-20!15;UBERON:0003057!4.95e-20!15;UBERON:0002420!1.28e-18!9;UBERON:0007245!1.28e-18!9;UBERON:0010009!1.28e-18!9;UBERON:0010011!1.28e-18!9;UBERON:0000454!1.28e-18!9;UBERON:0002308!3.99e-18!9;UBERON:0000125!3.99e-18!9;UBERON:0001871!1.95e-17!7;UBERON:0000200!2.14e-17!6;UBERON:0004111!2.09e-15!241;UBERON:0002021!3.39e-15!5;UBERON:0001872!9.98e-15!5;UBERON:0000349!3.05e-14!5;UBERON:0004733!1.04e-13!12;UBERON:0002028!1.04e-13!12;UBERON:0007277!1.04e-13!12;UBERON:0009663!1.65e-13!7;UBERON:0004732!1.53e-12!13;UBERON:0000483!3.61e-12!309;UBERON:0000119!6.25e-12!312;UBERON:0000477!6.90e-12!286;UBERON:0000064!8.99e-12!219;UBERON:0000369!2.53e-11!4;UBERON:0002435!2.53e-11!4;UBERON:0000204!2.53e-11!4;UBERON:0010082!2.53e-11!4;UBERON:0002680!4.26e-11!9;UBERON:0001895!4.26e-11!9;UBERON:0010092!4.26e-11!9;UBERON:0000475!2.18e-10!365;UBERON:0002771!1.68e-09!3;UBERON:0001894!3.46e-09!7;UBERON:0006222!3.46e-09!7;UBERON:0000062!4.26e-09!511;UBERON:0000988!7.13e-09!3;UBERON:0005383!8.40e-09!3;UBERON:0005382!8.40e-09!3;UBERON:0002240!1.26e-08!3;UBERON:0000922!1.94e-08!612;UBERON:0000923!3.73e-08!604;UBERON:0005291!3.73e-08!604;UBERON:0006598!3.73e-08!604;UBERON:0002532!3.73e-08!604;UBERON:0002050!4.09e-08!605;UBERON:0005423!4.09e-08!605;UBERON:0002298!4.16e-08!8;UBERON:0000467!6.33e-08!625;UBERON:0000480!6.92e-08!626;UBERON:0000481!1.43e-07!347;UBERON:0001876!5.91e-07!2;UBERON:0001870!7.23e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.18e-78;22!UBERON:0001950;1.09e-77;20!UBERON:0001869;5.28e-69;32!UBERON:0000956;1.50e-68;25!UBERON:0000203;1.50e-68;25!UBERON:0002791;1.60e-62;32!UBERON:0003528;1.93e-62;34!UBERON:0002020;1.93e-62;34!UBERON:0001893;2.28e-61;34!UBERON:0002780;2.42e-48;41!UBERON:0001890;2.42e-48;41!UBERON:0000073;5.29e-41;53!UBERON:0002616;5.29e-41;53!UBERON:0000955;4.64e-34;68!UBERON:0001017;1.03e-29;75!UBERON:0000200;9.89e-28;6!UBERON:0001016;3.85e-27;83!UBERON:0001871;7.63e-24;6!UBERON:0001872;1.19e-23;5!UBERON:0002021;1.87e-16;5!UBERON:0000349;7.43e-15;5!UBERON:0001870;1.95e-14;3!UBERON:0002680;4.76e-13;9!UBERON:0001895;4.76e-13;9!UBERON:0011216;1.29e-12;132!UBERON:0002420;1.77e-12;9!UBERON:0007245;1.77e-12;9!UBERON:0010009;1.77e-12;9!UBERON:0010011;1.77e-12;9!UBERON:0000454;1.77e-12;9!UBERON:0002771;1.39e-10;2!UBERON:0007023;2.02e-10;114!UBERON:0001876;2.45e-10;2!UBERON:0002702;6.39e-10;2!UBERON:0004733;1.02e-09;12!UBERON:0002028;1.02e-09;12!UBERON:0004732;5.98e-09;13!UBERON:0000013;9.34e-09;5!UBERON:0002410;9.34e-09;5!UBERON:0000125;3.94e-08;9!UBERON:0002308;3.94e-08;9!UBERON:0002037;5.66e-08;6!UBERON:0000988;6.87e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.41e-78,22;UBERON:0001950,4.07e-78,20;UBERON:0001869,3.38e-77,32;UBERON:0001016,9.30e-75,89;UBERON:0001049,6.14e-73,56;UBERON:0005068,6.14e-73,56;UBERON:0006241,6.14e-73,56;UBERON:0007135,6.14e-73,56;UBERON:0001893,1.82e-72,34;UBERON:0003528,3.60e-72,34;UBERON:0002020,3.60e-72,34;UBERON:0000073,4.58e-72,53;UBERON:0002616,4.58e-72,53;UBERON:0001017,5.34e-71,81;UBERON:0002791,1.18e-70,32;UBERON:0000956,5.75e-69,25;UBERON:0000203,5.75e-69,25;UBERON:0000955,6.91e-67,68;UBERON:0006238,6.91e-67,68;UBERON:0002780,1.61e-64,41;UBERON:0001890,1.61e-64,41;UBERON:0003080,1.61e-64,41;UBERON:0006240,1.61e-64,41;UBERON:0003075,5.90e-48,82;UBERON:0007284,5.90e-48,82;UBERON:0002346,1.95e-45,86;UBERON:0003056,7.80e-42,61;UBERON:0010371,1.79e-36,104;UBERON:0004121,6.66e-36,171;UBERON:0000924,6.66e-36,171;UBERON:0006601,6.66e-36,171;UBERON:0007023,7.74e-31,114;UBERON:0011216,9.58e-31,223;UBERON:0010314,1.91e-29,132;UBERON:0000200,5.92e-28,6;UBERON:0001871,3.09e-24,6;UBERON:0001872,1.70e-23,5;UBERON:0000025,1.03e-16,192;UBERON:0002021,1.95e-16,5;UBERON:0000349,3.62e-15,5;UBERON:0001870,1.55e-14,3;UBERON:0002680,5.84e-13,9;UBERON:0001895,5.84e-13,9;UBERON:0010092,5.84e-13,9;UBERON:0002420,1.34e-12,9;UBERON:0007245,1.34e-12,9;UBERON:0010009,1.34e-12,9;UBERON:0010011,1.34e-12,9;UBERON:0000454,1.34e-12,9;UBERON:0004111,5.00e-12,240;UBERON:0003076,7.24e-11,15;UBERON:0003057,7.24e-11,15;UBERON:0002771,1.17e-10,2;UBERON:0001876,1.49e-10,2;UBERON:0002702,4.85e-10,2;UBERON:0004733,1.18e-09,12;UBERON:0002028,1.18e-09,12;UBERON:0007277,1.18e-09,12;UBERON:0004732,6.86e-09,13;UBERON:0000013,1.09e-08,5;UBERON:0002410,1.09e-08,5;UBERON:0000125,4.43e-08,9;UBERON:0002308,4.43e-08,9;UBERON:0000483,5.34e-08,306;UBERON:0002037,6.22e-08,6;UBERON:0006215,6.22e-08,6;UBERON:0000119,7.39e-08,309;UBERON:0000923,1.84e-07,560;UBERON:0010316,1.84e-07,560;UBERON:0005291,1.84e-07,560;UBERON:0006598,1.84e-07,560;UBERON:0010317,1.84e-07,560;UBERON:0002532,1.84e-07,560;UBERON:0002050,2.38e-07,564;UBERON:0005423,6.88e-07,581;UBERON:0000988,7.76e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,1.34013012267479,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,3.93874365949436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75466196876175,3.15411533750294,11.9768278800717,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,1.4471572635049,3.05163472634166,3.64911557773041,5.02430952221031,4.8264787373874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0.539209063845416,0,1.1713222286267,0,0,0,0,0,1.83643656978294,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,3.16553979779394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0,0,0,3.9487211827716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,3.29470915235301,1.6274820991845,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62691028688288,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40683808434017,1.29389773676018,0,2.18419276384028,0,0,0,0,0,0,0.80057074828547,0,0,1.79841830270087,4.25089728976755,0.798169295285756,4.51256001329661,5.29350562065608,5.87836645945852,2.26065903884592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.566428215499,3.12431239445539,1.2401207790071,2.47321659756237,2.18789923607288,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,1.76721305739762,4.47254860227374,0,0,0.078493092850514,0.942693539496011,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,3.8039015482506,0,0,0,0,0,0,0,0,0,0,0,4.89538729374586,2.18175345170189,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0.0918948995348449,0,0,0,0.829169439458779,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@TTC9B | |||
}} |
Latest revision as of 01:21, 18 September 2015
Short description: | p2@TTC9B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TTC9B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 70bp_to_AK054935_5end |
EntrezGene: | TTC9B |
HGNC: | 26395 |
UniProt: | Q8N6N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.57e-07 | 6 |